RNA–Protein interactions for RNA: ENST00000494646.1

MSH5-218, Transcript of mutS homolog 5, humanhuman

TSL 4

Gene MSH5, Length 528 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-218ENST00000494646 BMP6P22004 513 aa10.09□□□□□ -0.79
MSH5-218ENST00000494646 EIF2DP41214 584 aaKnown RBP10.09□□□□□ -0.79
MSH5-218ENST00000494646 KIR2DL1P43626 348 aaPredicted RBP10.09□□□□□ -0.79
MSH5-218ENST00000494646 FMO5P49326 533 aa10.09□□□□□ -0.79
MSH5-218ENST00000494646 LRRC63Q05C16 580 aa10.09□□□□□ -0.79
MSH5-218ENST00000494646 PDE4CQ08493 712 aa10.09□□□□□ -0.79
MSH5-218ENST00000494646 GOLGA7BQ2TAP0 167 aa10.09□□□□□ -0.79
MSH5-218ENST00000494646 USP39Q53GS9 565 aaKnown RBP10.09□□□□□ -0.79
MSH5-218ENST00000494646 ARHGAP17Q68EM7 881 aa10.09□□□□□ -0.79
MSH5-218ENST00000494646 CCDC186Q7Z3E2 898 aa10.09□□□□□ -0.79
MSH5-218ENST00000494646 ETFBKMTQ8IXQ9 262 aa10.09□□□□□ -0.79
MSH5-218ENST00000494646 PGBD3Q8N328 593 aa10.09□□□□□ -0.79
MSH5-218ENST00000494646 PHTF2Q8N3S3 785 aa10.09□□□□□ -0.79
MSH5-218ENST00000494646 TTC39CQ8N584 583 aa10.09□□□□□ -0.79
MSH5-218ENST00000494646 FRMD1Q8N878 549 aa10.09□□□□□ -0.79
MSH5-218ENST00000494646 IL17RCQ8NAC3 791 aa10.09□□□□□ -0.79
MSH5-218ENST00000494646 ANKRD52Q8NB46 1076 aa10.09□□□□□ -0.79
MSH5-218ENST00000494646 NELFBQ8WX92 580 aa10.09□□□□□ -0.79
MSH5-218ENST00000494646 RLN3Q8WXF3 142 aa10.09□□□□□ -0.79
MSH5-218ENST00000494646 SLC35C1Q96A29 364 aa10.09□□□□□ -0.79
MSH5-218ENST00000494646 ZC3H10Q96K80 434 aaKnown RBP10.09□□□□□ -0.79
MSH5-218ENST00000494646 BBS2Q9BXC9 721 aa10.09□□□□□ -0.79
MSH5-218ENST00000494646 UBXN6Q9BZV1 441 aa10.09□□□□□ -0.79
MSH5-218ENST00000494646 METTL14Q9HCE5 456 aaKnown RBP10.09□□□□□ -0.79
MSH5-218ENST00000494646 PNPLA8Q9NP80 782 aa10.09□□□□□ -0.79
MSH5-218ENST00000494646 CYLDQ9NQC7 956 aa10.09□□□□□ -0.79
MSH5-218ENST00000494646 RXFP3Q9NSD7 469 aa10.09□□□□□ -0.79
MSH5-218ENST00000494646 EBF1Q9UH73 591 aa10.09□□□□□ -0.79
MSH5-218ENST00000494646 DNMT3LQ9UJW3 386 aa10.09□□□□□ -0.79
MSH5-218ENST00000494646 LSM7Q9UK45 103 aaKnown RBP10.09□□□□□ -0.79
MSH5-218ENST00000494646 TSPAN16Q9UKR8 245 aa10.09□□□□□ -0.79
MSH5-218ENST00000494646 PCDHB4Q9Y5E5 795 aa10.09□□□□□ -0.79
MSH5-218ENST00000494646 PI4KAP42356 2102 aa10.09□□□□□ -0.79
MSH5-218ENST00000494646 CACNA1AO00555 2505 aa10.08□□□□□ -0.8
MSH5-218ENST00000494646 ADAMTS9Q9P2N4 1935 aa10.08□□□□□ -0.8
MSH5-218ENST00000494646 RNF225M0QZC1 329 aaPredicted RBP10.08□□□□□ -0.8
MSH5-218ENST00000494646 PIK3R2O00459 728 aa10.08□□□□□ -0.8
MSH5-218ENST00000494646 HOXC11O43248 304 aaPredicted RBP10.08□□□□□ -0.8
MSH5-218ENST00000494646 LRP3O75074 770 aa10.08□□□□□ -0.8
MSH5-218ENST00000494646 ADAM23O75077 832 aa10.08□□□□□ -0.8
MSH5-218ENST00000494646 STC2O76061 302 aa10.08□□□□□ -0.8
MSH5-218ENST00000494646 RHOBTB1O94844 696 aa10.08□□□□□ -0.8
MSH5-218ENST00000494646 EPN2O95208 641 aa10.08□□□□□ -0.8
MSH5-218ENST00000494646 ZNF806P0C7X5 589 aa10.08□□□□□ -0.8
MSH5-218ENST00000494646 LCP1P13796 627 aa10.08□□□□□ -0.8
MSH5-218ENST00000494646 TYRP14679 529 aa10.08□□□□□ -0.8
MSH5-218ENST00000494646 SDHBP21912 280 aa10.08□□□□□ -0.8
MSH5-218ENST00000494646 PSEN1P49768 467 aa10.08□□□□□ -0.8
MSH5-218ENST00000494646 TKTL1P51854 596 aa10.08□□□□□ -0.8
MSH5-218ENST00000494646 SLC8A3P57103 927 aa10.08□□□□□ -0.8
MSH5-218ENST00000494646 CREB5Q02930 508 aa10.08□□□□□ -0.8
MSH5-218ENST00000494646 GOLGA8FQ08AF8 430 aa10.08□□□□□ -0.8
MSH5-218ENST00000494646 GOLGA8DPQ0D2H9 430 aa10.08□□□□□ -0.8
MSH5-218ENST00000494646 AASDHQ4L235 1098 aaPredicted RBP10.08□□□□□ -0.8
MSH5-218ENST00000494646 SGO2Q562F6 1265 aa10.08□□□□□ -0.8
MSH5-218ENST00000494646 EOGTQ5NDL2 527 aa10.08□□□□□ -0.8
MSH5-218ENST00000494646 C10orf76Q5T2E6 689 aa10.08□□□□□ -0.8
MSH5-218ENST00000494646 TMEM270Q6UE05 265 aa10.08□□□□□ -0.8
MSH5-218ENST00000494646 TOGARAM2Q6ZUX3 1019 aa10.08□□□□□ -0.8
MSH5-218ENST00000494646 RRAGAQ7L523 313 aa10.08□□□□□ -0.8
MSH5-218ENST00000494646 CREBRFQ8IUR6 639 aa10.08□□□□□ -0.8
MSH5-218ENST00000494646 ELOA2Q8IYF1 753 aaPredicted RBP10.08□□□□□ -0.8
MSH5-218ENST00000494646 ZNF513Q8N8E2 541 aaPredicted RBP10.08□□□□□ -0.8
MSH5-218ENST00000494646 C12orf50Q8NA57 414 aaPredicted RBP10.08□□□□□ -0.8
MSH5-218ENST00000494646 MDGA1Q8NFP4 955 aa10.08□□□□□ -0.8
MSH5-218ENST00000494646 KAT5Q92993 513 aa10.08□□□□□ -0.8
MSH5-218ENST00000494646 P2RY11Q96G91 374 aa10.08□□□□□ -0.8
MSH5-218ENST00000494646 FAXDC2Q96IV6 333 aa10.08□□□□□ -0.8
MSH5-218ENST00000494646 LOXL4Q96JB6 756 aa10.08□□□□□ -0.8
MSH5-218ENST00000494646 XPO6Q96QU8 1125 aaKnown RBP10.08□□□□□ -0.8
MSH5-218ENST00000494646 SRRTQ9BXP5 876 aaKnown RBP10.08□□□□□ -0.8
MSH5-218ENST00000494646 ULBP1Q9BZM6 244 aa10.08□□□□□ -0.8
MSH5-218ENST00000494646 LRRC4Q9HBW1 653 aa10.08□□□□□ -0.8
MSH5-218ENST00000494646 POLMQ9NP87 494 aaPredicted RBP10.08□□□□□ -0.8
MSH5-218ENST00000494646 DNAJC17Q9NVM6 304 aaKnown RBP10.08□□□□□ -0.8
MSH5-218ENST00000494646 HCN2Q9UL51 889 aa10.08□□□□□ -0.8
MSH5-218ENST00000494646 CTNND2Q9UQB3 1225 aa10.08□□□□□ -0.8
MSH5-218ENST00000494646 SLC12A8A0AV02 714 aa10.07□□□□□ -0.8
MSH5-218ENST00000494646 PRRT4C9JH25 899 aa10.07□□□□□ -0.8
MSH5-218ENST00000494646 MAP3K13O43283 966 aa10.07□□□□□ -0.8
MSH5-218ENST00000494646 ALDH1A2O94788 518 aa10.07□□□□□ -0.8
MSH5-218ENST00000494646 ZBED1O96006 694 aa10.07□□□□□ -0.8
MSH5-218ENST00000494646 KLKB1P03952 638 aa10.07□□□□□ -0.8
MSH5-218ENST00000494646 CISD3P0C7P0 127 aa10.07□□□□□ -0.8
MSH5-218ENST00000494646 VDRP11473 427 aa10.07□□□□□ -0.8
MSH5-218ENST00000494646 BCKDHBP21953 392 aa10.07□□□□□ -0.8
MSH5-218ENST00000494646 RGS7P49802 495 aa10.07□□□□□ -0.8
MSH5-218ENST00000494646 YWHAGP61981 247 aaKnown RBP eCLIP10.07□□□□□ -0.8
MSH5-218ENST00000494646 YWHAEP62258 255 aaKnown RBP10.07□□□□□ -0.8
MSH5-218ENST00000494646 COG7P83436 770 aa10.07□□□□□ -0.8
MSH5-218ENST00000494646 KCNH2Q12809 1159 aa10.07□□□□□ -0.8
MSH5-218ENST00000494646 MORC3Q14149 939 aa10.07□□□□□ -0.8
MSH5-218ENST00000494646 ELF2Q15723 593 aa10.07□□□□□ -0.8
MSH5-218ENST00000494646 CAMK4Q16566 473 aa10.07□□□□□ -0.8
MSH5-218ENST00000494646 RAB41Q5JT25 222 aa10.07□□□□□ -0.8
MSH5-218ENST00000494646 GRAMD4Q6IC98 578 aa10.07□□□□□ -0.8
MSH5-218ENST00000494646 TTI2Q6NXR4 508 aa10.07□□□□□ -0.8
MSH5-218ENST00000494646 KLHDC10Q6PID8 442 aa10.07□□□□□ -0.8
MSH5-218ENST00000494646 NUDT18Q6ZVK8 323 aa10.07□□□□□ -0.8
MSH5-218ENST00000494646 TADA2BQ86TJ2 420 aa10.07□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms