RNA–Protein interactions for RNA: ENST00000493232.5

BRAT1-206, Transcript of BRCA1 associated ATM activator 1, humanhuman

TSL 2

Gene BRAT1, Length 5,360 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRAT1-206ENST00000493232 O00370 1275 aa16.78■□□□□ 0.28
BRAT1-206ENST00000493232 SYNCRIPO60506 623 aaKnown RBP16.78■□□□□ 0.28
BRAT1-206ENST00000493232 RASSF9O75901 435 aa16.78■□□□□ 0.28
BRAT1-206ENST00000493232 ZNF268Q14587 947 aaPredicted RBP16.78■□□□□ 0.28
BRAT1-206ENST00000493232 GALNTL6Q49A17 601 aa16.78■□□□□ 0.28
BRAT1-206ENST00000493232 ERMARDQ5T6L9 678 aa16.78■□□□□ 0.28
BRAT1-206ENST00000493232 OVOS1Q6IE37 1185 aa16.78■□□□□ 0.28
BRAT1-206ENST00000493232 OTOAQ7RTW8 1153 aa16.78■□□□□ 0.28
BRAT1-206ENST00000493232 KIAA2013Q8IYS2 634 aa16.78■□□□□ 0.28
BRAT1-206ENST00000493232 CTNNAL1Q9UBT7 734 aa16.78■□□□□ 0.28
BRAT1-206ENST00000493232 PNMA8BQ9ULN7 279 aaPredicted RBP16.78■□□□□ 0.28
BRAT1-206ENST00000493232 PEX5P50542 639 aa16.78■□□□□ 0.28
BRAT1-206ENST00000493232 HERVK_113P62684 666 aa16.78■□□□□ 0.28
BRAT1-206ENST00000493232 CXCL9Q07325 125 aa16.78■□□□□ 0.28
BRAT1-206ENST00000493232 OVGP1Q12889 678 aa16.78■□□□□ 0.28
BRAT1-206ENST00000493232 CYLC2Q14093 348 aaPredicted RBP16.78■□□□□ 0.28
BRAT1-206ENST00000493232 NBPF12Q5TAG4 269 aaPredicted RBP16.78■□□□□ 0.28
BRAT1-206ENST00000493232 CDKAL1Q5VV42 579 aa16.78■□□□□ 0.28
BRAT1-206ENST00000493232 ANKS6Q68DC2 871 aa16.78■□□□□ 0.28
BRAT1-206ENST00000493232 ZNF571Q7Z3V5 609 aaPredicted RBP16.78■□□□□ 0.28
BRAT1-206ENST00000493232 SLC47A2Q86VL8 602 aa16.78■□□□□ 0.28
BRAT1-206ENST00000493232 MAN1C1Q9NR34 630 aa16.78■□□□□ 0.28
BRAT1-206ENST00000493232 UTP6Q9NYH9 597 aaKnown RBP16.78■□□□□ 0.28
BRAT1-206ENST00000493232 PLA2G4CQ9UP65 541 aa16.78■□□□□ 0.28
BRAT1-206ENST00000493232 PRR23AA6NEV1 266 aa16.77■□□□□ 0.28
BRAT1-206ENST00000493232 VIL1P09327 827 aaKnown RBP16.77■□□□□ 0.28
BRAT1-206ENST00000493232 TPBGLP0DKB5 382 aa16.77■□□□□ 0.28
BRAT1-206ENST00000493232 INSRRP14616 1297 aa16.77■□□□□ 0.28
BRAT1-206ENST00000493232 VCPIP1Q96JH7 1222 aa16.77■□□□□ 0.28
BRAT1-206ENST00000493232 PACSIN1Q9BY11 444 aa16.77■□□□□ 0.28
BRAT1-206ENST00000493232 CDC42EP4Q9H3Q1 356 aaKnown RBP16.77■□□□□ 0.28
BRAT1-206ENST00000493232 L2HGDHQ9H9P8 463 aa16.77■□□□□ 0.28
BRAT1-206ENST00000493232 TMBIM4Q9HC24 238 aa16.77■□□□□ 0.28
BRAT1-206ENST00000493232 NCF1BA6NI72 391 aaPredicted RBP16.77■□□□□ 0.28
BRAT1-206ENST00000493232 NCF1CA8MVU1 366 aaPredicted RBP16.77■□□□□ 0.28
BRAT1-206ENST00000493232 MPOP05164 745 aa16.77■□□□□ 0.28
BRAT1-206ENST00000493232 NCF1P14598 390 aaPredicted RBP16.77■□□□□ 0.28
BRAT1-206ENST00000493232 C2CD6Q53TS8 623 aa16.77■□□□□ 0.28
BRAT1-206ENST00000493232 SLC27A1Q6PCB7 646 aa16.77■□□□□ 0.28
BRAT1-206ENST00000493232 PHACTR4Q8IZ21 702 aa16.77■□□□□ 0.28
BRAT1-206ENST00000493232 PRKD2Q9BZL6 878 aa16.77■□□□□ 0.28
BRAT1-206ENST00000493232 SHOC2Q9UQ13 582 aa16.77■□□□□ 0.28
BRAT1-206ENST00000493232 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP16.77■□□□□ 0.27
BRAT1-206ENST00000493232 MAP3K6O95382 1288 aa16.77■□□□□ 0.27
BRAT1-206ENST00000493232 HNRNPCP07910 306 aaKnown RBP eCLIP16.77■□□□□ 0.27
BRAT1-206ENST00000493232 CCDC159P0C7I6 412 aa16.77■□□□□ 0.27
BRAT1-206ENST00000493232 CPA3P15088 417 aa16.77■□□□□ 0.27
BRAT1-206ENST00000493232 NFYCQ13952 458 aa16.77■□□□□ 0.27
BRAT1-206ENST00000493232 CCDC142Q17RM4 750 aa16.77■□□□□ 0.27
BRAT1-206ENST00000493232 MARC1Q5VT66 337 aa16.77■□□□□ 0.27
BRAT1-206ENST00000493232 ZPBP2Q6X784 338 aa16.77■□□□□ 0.27
BRAT1-206ENST00000493232 C10orf53Q8N6V4 93 aa16.77■□□□□ 0.27
BRAT1-206ENST00000493232 TMEM121Q9BTD3 319 aa16.77■□□□□ 0.27
BRAT1-206ENST00000493232 VANGL2Q9ULK5 521 aa16.77■□□□□ 0.27
BRAT1-206ENST00000493232 PPRC1Q5VV67 1664 aaKnown RBP16.77■□□□□ 0.27
BRAT1-206ENST00000493232 CBX4O00257 560 aa16.77■□□□□ 0.27
BRAT1-206ENST00000493232 SERPINF2P08697 491 aa16.77■□□□□ 0.27
BRAT1-206ENST00000493232 FUT11Q495W5 492 aa16.77■□□□□ 0.27
BRAT1-206ENST00000493232 ATP6AP1LQ52LC2 224 aa16.77■□□□□ 0.27
BRAT1-206ENST00000493232 LRRC8DQ7L1W4 858 aa16.77■□□□□ 0.27
BRAT1-206ENST00000493232 ZNF410Q86VK4 478 aa16.77■□□□□ 0.27
BRAT1-206ENST00000493232 LZTR1Q8N653 840 aa16.77■□□□□ 0.27
BRAT1-206ENST00000493232 COLGALT1Q8NBJ5 622 aa16.77■□□□□ 0.27
BRAT1-206ENST00000493232 CPA4Q9UI42 421 aa16.77■□□□□ 0.27
BRAT1-206ENST00000493232 MANSC4A6NHS7 340 aaPredicted RBP16.76■□□□□ 0.27
BRAT1-206ENST00000493232 KHDRBS1Q07666 443 aaKnown RBP eCLIP16.76■□□□□ 0.27
BRAT1-206ENST00000493232 PRRG3Q9BZD7 231 aa16.76■□□□□ 0.27
BRAT1-206ENST00000493232 SHCBP1LQ9BZQ2 653 aa16.76■□□□□ 0.27
BRAT1-206ENST00000493232 SLC40A1Q9NP59 571 aa16.76■□□□□ 0.27
BRAT1-206ENST00000493232 USE1Q9NZ43 259 aa16.76■□□□□ 0.27
BRAT1-206ENST00000493232 CNTNAP2Q9UHC6 1331 aa16.76■□□□□ 0.27
BRAT1-206ENST00000493232 TARSP26639 723 aaKnown RBP16.76■□□□□ 0.27
BRAT1-206ENST00000493232 SERPINB5P36952 375 aa16.76■□□□□ 0.27
BRAT1-206ENST00000493232 ILDR2Q71H61 639 aa16.76■□□□□ 0.27
BRAT1-206ENST00000493232 WDR48Q8TAF3 677 aa16.76■□□□□ 0.27
BRAT1-206ENST00000493232 INTS13Q9NVM9 706 aa16.76■□□□□ 0.27
BRAT1-206ENST00000493232 DDX52Q9Y2R4 599 aaKnown RBP eCLIP16.76■□□□□ 0.27
BRAT1-206ENST00000493232 CKBP12277 381 aa16.76■□□□□ 0.27
BRAT1-206ENST00000493232 TFE3P19532 575 aaPredicted RBP16.76■□□□□ 0.27
BRAT1-206ENST00000493232 DSG1Q02413 1049 aa16.76■□□□□ 0.27
BRAT1-206ENST00000493232 GCNT1Q02742 428 aa16.76■□□□□ 0.27
BRAT1-206ENST00000493232 CDH17Q12864 832 aa16.76■□□□□ 0.27
BRAT1-206ENST00000493232 MFSD4BQ5TF39 518 aa16.76■□□□□ 0.27
BRAT1-206ENST00000493232 MRPL9Q9BYD2 267 aaKnown RBP16.76■□□□□ 0.27
BRAT1-206ENST00000493232 ELOVL6Q9H5J4 265 aa16.76■□□□□ 0.27
BRAT1-206ENST00000493232 DNAJC16Q9Y2G8 782 aa16.76■□□□□ 0.27
BRAT1-206ENST00000493232 ZNF711Q9Y462 761 aa16.76■□□□□ 0.27
BRAT1-206ENST00000493232 RNF103O00237 685 aa16.76■□□□□ 0.27
BRAT1-206ENST00000493232 ZNF286BP0CG31 522 aa16.76■□□□□ 0.27
BRAT1-206ENST00000493232 ADRM1Q16186 407 aa16.76■□□□□ 0.27
BRAT1-206ENST00000493232 RBM43Q6ZSC3 357 aaKnown RBP16.76■□□□□ 0.27
BRAT1-206ENST00000493232 MCOLN2Q8IZK6 566 aa16.76■□□□□ 0.27
BRAT1-206ENST00000493232 REPS2Q8NFH8 660 aa16.76■□□□□ 0.27
BRAT1-206ENST00000493232 SMARCD1Q96GM5 515 aa16.76■□□□□ 0.27
BRAT1-206ENST00000493232 CIPCQ9C0C6 399 aa16.76■□□□□ 0.27
BRAT1-206ENST00000493232 SETD4Q9NVD3 440 aa16.76■□□□□ 0.27
BRAT1-206ENST00000493232 RBM22Q9NW64 420 aaKnown RBP eCLIP16.76■□□□□ 0.27
BRAT1-206ENST00000493232 SNTG2Q9NY99 539 aa16.76■□□□□ 0.27
BRAT1-206ENST00000493232 FAM205AQ6ZU69 1335 aa16.76■□□□□ 0.27
BRAT1-206ENST00000493232 ADAMTS13Q76LX8 1427 aa16.76■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms