RNA–Protein interactions for RNA: ENST00000492539.5

NELFE-212, Transcript of negative elongation factor complex member E, humanhuman

TSL 3

Gene NELFE, Length 583 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NELFE-212ENST00000492539 EXOC1Q9NV70 894 aa21■□□□□ 0.95
NELFE-212ENST00000492539 DNAJC17Q9NVM6 304 aaKnown RBP21■□□□□ 0.95
NELFE-212ENST00000492539 SCML2Q9UQR0 700 aa21■□□□□ 0.95
NELFE-212ENST00000492539 HPSEQ9Y251 543 aa21■□□□□ 0.95
NELFE-212ENST00000492539 IGF2RP11717 2491 aa20.99■□□□□ 0.95
NELFE-212ENST00000492539 NEDD8-MDP1E9PL57 170 aa20.99■□□□□ 0.95
NELFE-212ENST00000492539 TOP3BO95985 862 aaKnown RBP20.99■□□□□ 0.95
NELFE-212ENST00000492539 TYRP14679 529 aa20.99■□□□□ 0.95
NELFE-212ENST00000492539 SPINK2P20155 84 aa20.99■□□□□ 0.95
NELFE-212ENST00000492539 ATP5C1P36542 298 aaKnown RBP20.99■□□□□ 0.95
NELFE-212ENST00000492539 MAPK8P45983 427 aa20.99■□□□□ 0.95
NELFE-212ENST00000492539 RPL6Q02878 288 aaKnown RBP20.99■□□□□ 0.95
NELFE-212ENST00000492539 KDF1Q8NAX2 398 aaPredicted RBP20.99■□□□□ 0.95
NELFE-212ENST00000492539 CEP76Q8TAP6 659 aa20.99■□□□□ 0.95
NELFE-212ENST00000492539 TWNKQ96RR1 684 aa20.99■□□□□ 0.95
NELFE-212ENST00000492539 ACOX2Q99424 681 aa20.99■□□□□ 0.95
NELFE-212ENST00000492539 GABRG3Q99928 467 aa20.99■□□□□ 0.95
NELFE-212ENST00000492539 BBS2Q9BXC9 721 aa20.99■□□□□ 0.95
NELFE-212ENST00000492539 ADAM33Q9BZ11 813 aa20.99■□□□□ 0.95
NELFE-212ENST00000492539 NMUR1Q9HB89 426 aa20.99■□□□□ 0.95
NELFE-212ENST00000492539 PNPLA8Q9NP80 782 aa20.99■□□□□ 0.95
NELFE-212ENST00000492539 WDR35Q9P2L0 1181 aa20.99■□□□□ 0.95
NELFE-212ENST00000492539 CACNA1EQ15878 2313 aa20.99■□□□□ 0.95
NELFE-212ENST00000492539 SPEGQ15772 3267 aa20.98■□□□□ 0.95
NELFE-212ENST00000492539 IGHV1OR15-9A0A0B4J2B8 117 aa20.98■□□□□ 0.95
NELFE-212ENST00000492539 A0A1B0GVL5 298 aa20.98■□□□□ 0.95
NELFE-212ENST00000492539 UPK3BL1B0FP48 263 aa20.98■□□□□ 0.95
NELFE-212ENST00000492539 PRRT4C9JH25 899 aa20.98■□□□□ 0.95
NELFE-212ENST00000492539 UPK3BL2E5RIL1 263 aa20.98■□□□□ 0.95
NELFE-212ENST00000492539 CYP26A1O43174 497 aa20.98■□□□□ 0.95
NELFE-212ENST00000492539 HLA-DRAP01903 254 aa20.98■□□□□ 0.95
NELFE-212ENST00000492539 ADORA2BP29275 332 aa20.98■□□□□ 0.95
NELFE-212ENST00000492539 WASP42768 502 aa20.98■□□□□ 0.95
NELFE-212ENST00000492539 GOLGA8FQ08AF8 430 aa20.98■□□□□ 0.95
NELFE-212ENST00000492539 GOLGA8DPQ0D2H9 430 aa20.98■□□□□ 0.95
NELFE-212ENST00000492539 DUOXA1Q1HG43 343 aa20.98■□□□□ 0.95
NELFE-212ENST00000492539 KLHDC10Q6PID8 442 aa20.98■□□□□ 0.95
NELFE-212ENST00000492539 PIP4P1Q86T03 277 aa20.98■□□□□ 0.95
NELFE-212ENST00000492539 IPO4Q8TEX9 1081 aaKnown RBP20.98■□□□□ 0.95
NELFE-212ENST00000492539 CAPN10Q9HC96 672 aa20.98■□□□□ 0.95
NELFE-212ENST00000492539 LSM7Q9UK45 103 aaKnown RBP20.98■□□□□ 0.95
NELFE-212ENST00000492539 SLC6A14Q9UN76 642 aa20.98■□□□□ 0.95
NELFE-212ENST00000492539 PCDHA5Q9Y5H7 936 aa20.98■□□□□ 0.95
NELFE-212ENST00000492539 MAPK13O15264 365 aa20.97■□□□□ 0.95
NELFE-212ENST00000492539 ZNF217O75362 1048 aa20.97■□□□□ 0.95
NELFE-212ENST00000492539 NDUFV2P19404 249 aa20.97■□□□□ 0.95
NELFE-212ENST00000492539 PIK3CAP42336 1068 aa20.97■□□□□ 0.95
NELFE-212ENST00000492539 ZNF33AQ06730 810 aa20.97■□□□□ 0.95
NELFE-212ENST00000492539 SEMA3BQ13214 749 aa20.97■□□□□ 0.95
NELFE-212ENST00000492539 KIAA1211LQ6NV74 962 aa20.97■□□□□ 0.95
NELFE-212ENST00000492539 Q6ZNB5 142 aa20.97■□□□□ 0.95
NELFE-212ENST00000492539 TPGS1Q6ZTW0 290 aa20.97■□□□□ 0.95
NELFE-212ENST00000492539 TOGARAM2Q6ZUX3 1019 aa20.97■□□□□ 0.95
NELFE-212ENST00000492539 CHPFQ8IZ52 775 aa20.97■□□□□ 0.95
NELFE-212ENST00000492539 GATA6Q92908 595 aa20.97■□□□□ 0.95
NELFE-212ENST00000492539 SCNM1Q9BWG6 230 aa20.97■□□□□ 0.95
NELFE-212ENST00000492539 SLC32A1Q9H598 525 aa20.97■□□□□ 0.95
NELFE-212ENST00000492539 MTPAPQ9NVV4 582 aaKnown RBP eCLIP20.97■□□□□ 0.95
NELFE-212ENST00000492539 USP25Q9UHP3 1055 aa20.97■□□□□ 0.95
NELFE-212ENST00000492539 ZMIZ1Q9ULJ6 1067 aa20.97■□□□□ 0.95
NELFE-212ENST00000492539 TRAF3IP3Q9Y228 551 aa20.97■□□□□ 0.95
NELFE-212ENST00000492539 FAM208BQ5VWN6 2430 aa20.96■□□□□ 0.95
NELFE-212ENST00000492539 A0A1W2PQH9 124 aa20.96■□□□□ 0.95
NELFE-212ENST00000492539 CFIP05156 583 aa20.96■□□□□ 0.95
NELFE-212ENST00000492539 MYL1P05976 194 aa20.96■□□□□ 0.95
NELFE-212ENST00000492539 SERPINF2P08697 491 aa20.96■□□□□ 0.95
NELFE-212ENST00000492539 CISD3P0C7P0 127 aa20.96■□□□□ 0.95
NELFE-212ENST00000492539 RARGP13631 454 aa20.96■□□□□ 0.95
NELFE-212ENST00000492539 TRIM21P19474 475 aaKnown RBP20.96■□□□□ 0.95
NELFE-212ENST00000492539 ACO1P21399 889 aaKnown RBP20.96■□□□□ 0.95
NELFE-212ENST00000492539 CEP135Q66GS9 1140 aa20.96■□□□□ 0.95
NELFE-212ENST00000492539 SDE2Q6IQ49 451 aa20.96■□□□□ 0.95
NELFE-212ENST00000492539 RABEPKQ7Z6M1 372 aa20.96■□□□□ 0.95
NELFE-212ENST00000492539 SLC41A1Q8IVJ1 513 aa20.96■□□□□ 0.95
NELFE-212ENST00000492539 DEFB119Q8N690 84 aa20.96■□□□□ 0.95
NELFE-212ENST00000492539 CYFIP2Q96F07 1278 aa20.96■□□□□ 0.95
NELFE-212ENST00000492539 CYP3A43Q9HB55 503 aa20.96■□□□□ 0.95
NELFE-212ENST00000492539 APOBEC3GQ9HC16 384 aaKnown RBP20.96■□□□□ 0.95
NELFE-212ENST00000492539 FSCN3Q9NQT6 498 aa20.96■□□□□ 0.95
NELFE-212ENST00000492539 UTP3Q9NQZ2 479 aaKnown RBP eCLIP20.96■□□□□ 0.953e-9■■■■■ 65.2
NELFE-212ENST00000492539 FBXO10Q9UK96 956 aa20.96■□□□□ 0.95
NELFE-212ENST00000492539 FRMD4BQ9Y2L6 1034 aa20.96■□□□□ 0.95
NELFE-212ENST00000492539 MDM4O15151 490 aa20.95■□□□□ 0.94
NELFE-212ENST00000492539 CALUO43852 315 aaPredicted RBP20.95■□□□□ 0.94
NELFE-212ENST00000492539 SYKP43405 635 aa20.95■□□□□ 0.94
NELFE-212ENST00000492539 PLA2G4AP47712 749 aa20.95■□□□□ 0.94
NELFE-212ENST00000492539 DGKGP49619 791 aa20.95■□□□□ 0.94
NELFE-212ENST00000492539 VAMP7P51809 220 aa20.95■□□□□ 0.94
NELFE-212ENST00000492539 NDUFA8P51970 172 aa20.95■□□□□ 0.94
NELFE-212ENST00000492539 KIF11P52732 1056 aa20.95■□□□□ 0.94
NELFE-212ENST00000492539 NFIL3Q16649 462 aa20.95■□□□□ 0.94
NELFE-212ENST00000492539 ZNF276Q8N554 614 aa20.95■□□□□ 0.94
NELFE-212ENST00000492539 JAKMIP2Q96AA8 810 aa20.95■□□□□ 0.94
NELFE-212ENST00000492539 P2RY11Q96G91 374 aa20.95■□□□□ 0.94
NELFE-212ENST00000492539 NT5C1AQ9BXI3 368 aa20.95■□□□□ 0.94
NELFE-212ENST00000492539 GOLPH3LQ9H4A5 285 aa20.95■□□□□ 0.94
NELFE-212ENST00000492539 DNMT3LQ9UJW3 386 aa20.95■□□□□ 0.94
NELFE-212ENST00000492539 NUDT5Q9UKK9 219 aa20.95■□□□□ 0.94
NELFE-212ENST00000492539 TMEM8BA6NDV4 472 aa20.94■□□□□ 0.94
NELFE-212ENST00000492539 GOLGA6L4A6NEF3 574 aa20.94■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms