RNA–Protein interactions for RNA: ENST00000492462.1

MDC1-207, Transcript of mediator of DNA damage checkpoint 1, humanhuman

TSL 3

Gene MDC1, Length 819 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDC1-207ENST00000492462 FBXO43Q4G163 708 aa12.38□□□□□ -0.43
MDC1-207ENST00000492462 KLHDC10Q6PID8 442 aa12.38□□□□□ -0.43
MDC1-207ENST00000492462 PRR23BQ6ZRT6 265 aa12.38□□□□□ -0.43
MDC1-207ENST00000492462 ETFBKMTQ8IXQ9 262 aa12.38□□□□□ -0.43
MDC1-207ENST00000492462 PHTF2Q8N3S3 785 aa12.38□□□□□ -0.43
MDC1-207ENST00000492462 CCDC33Q8N5R6 958 aa12.38□□□□□ -0.43
MDC1-207ENST00000492462 MLKLQ8NB16 471 aa12.38□□□□□ -0.43
MDC1-207ENST00000492462 OTUB2Q96DC9 234 aa12.38□□□□□ -0.43
MDC1-207ENST00000492462 PNKPQ96T60 521 aa12.38□□□□□ -0.43
MDC1-207ENST00000492462 SPHK2Q9NRA0 654 aa12.38□□□□□ -0.43
MDC1-207ENST00000492462 CLIC5Q9NZA1 410 aa12.38□□□□□ -0.43
MDC1-207ENST00000492462 NCDNQ9UBB6 729 aa12.38□□□□□ -0.43
MDC1-207ENST00000492462 HESX1Q9UBX0 185 aa12.38□□□□□ -0.43
MDC1-207ENST00000492462 RASAL2Q9UJF2 1139 aa12.38□□□□□ -0.43
MDC1-207ENST00000492462 DNMT3LQ9UJW3 386 aa12.38□□□□□ -0.43
MDC1-207ENST00000492462 SLC8A2Q9UPR5 921 aa12.38□□□□□ -0.43
MDC1-207ENST00000492462 RALGAPA1Q6GYQ0 2036 aa12.37□□□□□ -0.43
MDC1-207ENST00000492462 ATG13O75143 517 aa12.37□□□□□ -0.43
MDC1-207ENST00000492462 TULP3O75386 442 aa12.37□□□□□ -0.43
MDC1-207ENST00000492462 KAT7O95251 611 aa12.37□□□□□ -0.43
MDC1-207ENST00000492462 ZBED1O96006 694 aa12.37□□□□□ -0.43
MDC1-207ENST00000492462 PAEPP09466 180 aa12.37□□□□□ -0.43
MDC1-207ENST00000492462 RALAP11233 206 aa12.37□□□□□ -0.43
MDC1-207ENST00000492462 HNRNPLP14866 589 aaKnown RBP eCLIP12.37□□□□□ -0.43
MDC1-207ENST00000492462 SLC9A1P19634 815 aa12.37□□□□□ -0.43
MDC1-207ENST00000492462 HOXA6P31267 233 aa12.37□□□□□ -0.43
MDC1-207ENST00000492462 PLA2G4AP47712 749 aa12.37□□□□□ -0.43
MDC1-207ENST00000492462 PSEN1P49768 467 aa12.37□□□□□ -0.43
MDC1-207ENST00000492462 YWHAGP61981 247 aaKnown RBP eCLIP12.37□□□□□ -0.43
MDC1-207ENST00000492462 GCNT1Q02742 428 aa12.37□□□□□ -0.43
MDC1-207ENST00000492462 GAD2Q05329 585 aa12.37□□□□□ -0.43
MDC1-207ENST00000492462 BST2Q10589 180 aaKnown RBP12.37□□□□□ -0.43
MDC1-207ENST00000492462 CETN1Q12798 172 aa12.37□□□□□ -0.43
MDC1-207ENST00000492462 SIM2Q14190 667 aaPredicted RBP12.37□□□□□ -0.43
MDC1-207ENST00000492462 DMC1Q14565 340 aa12.37□□□□□ -0.43
MDC1-207ENST00000492462 ANO4Q32M45 955 aa12.37□□□□□ -0.43
MDC1-207ENST00000492462 PM20D1Q6GTS8 502 aa12.37□□□□□ -0.43
MDC1-207ENST00000492462 PMF1Q6P1K2 205 aa12.37□□□□□ -0.43
MDC1-207ENST00000492462 LCLAT1Q6UWP7 414 aa12.37□□□□□ -0.43
MDC1-207ENST00000492462 Q6ZNB5 142 aa12.37□□□□□ -0.43
MDC1-207ENST00000492462 CLEC17AQ6ZS10 378 aa12.37□□□□□ -0.43
MDC1-207ENST00000492462 SYT13Q7L8C5 426 aa12.37□□□□□ -0.43
MDC1-207ENST00000492462 WDR5BQ86VZ2 330 aa12.37□□□□□ -0.43
MDC1-207ENST00000492462 ZNF276Q8N554 614 aa12.37□□□□□ -0.43
MDC1-207ENST00000492462 SECISBP2LQ93073 1101 aaKnown RBP12.37□□□□□ -0.43
MDC1-207ENST00000492462 EXOC4Q96A65 974 aa12.37□□□□□ -0.43
MDC1-207ENST00000492462 NUP62CLQ9H1M0 184 aa12.37□□□□□ -0.43
MDC1-207ENST00000492462 LRRC4Q9HBW1 653 aa12.37□□□□□ -0.43
MDC1-207ENST00000492462 ACP6Q9NPH0 428 aa12.37□□□□□ -0.43
MDC1-207ENST00000492462 ARHGEF4Q9NR80 690 aa12.37□□□□□ -0.43
MDC1-207ENST00000492462 HCN2Q9UL51 889 aa12.37□□□□□ -0.43
MDC1-207ENST00000492462 KIAA1257Q9ULG3 409 aa12.37□□□□□ -0.43
MDC1-207ENST00000492462 WDR3Q9UNX4 943 aaKnown RBP eCLIP12.37□□□□□ -0.43
MDC1-207ENST00000492462 ABCA7Q8IZY2 2146 aa12.37□□□□□ -0.43
MDC1-207ENST00000492462 YJEFN3A6XGL0 299 aa12.36□□□□□ -0.43
MDC1-207ENST00000492462 E7ENQ6 273 aa12.36□□□□□ -0.43
MDC1-207ENST00000492462 M0QYV0 167 aa12.36□□□□□ -0.43
MDC1-207ENST00000492462 HOXC11O43248 304 aaPredicted RBP12.36□□□□□ -0.43
MDC1-207ENST00000492462 FGFR1OPO95684 399 aaKnown RBP12.36□□□□□ -0.43
MDC1-207ENST00000492462 SETSIPP0DME0 302 aa12.36□□□□□ -0.43
MDC1-207ENST00000492462 LCP1P13796 627 aa12.36□□□□□ -0.43
MDC1-207ENST00000492462 TGM1P22735 817 aa12.36□□□□□ -0.43
MDC1-207ENST00000492462 EIF2DP41214 584 aaKnown RBP12.36□□□□□ -0.43
MDC1-207ENST00000492462 SLC8A3P57103 927 aa12.36□□□□□ -0.43
MDC1-207ENST00000492462 CNGA2Q16280 664 aa12.36□□□□□ -0.43
MDC1-207ENST00000492462 RSPO4Q2I0M5 234 aaPredicted RBP12.36□□□□□ -0.43
MDC1-207ENST00000492462 HSP90AA4PQ58FG1 418 aa12.36□□□□□ -0.43
MDC1-207ENST00000492462 TRIM65Q6PJ69 517 aa12.36□□□□□ -0.43
MDC1-207ENST00000492462 TPGS1Q6ZTW0 290 aa12.36□□□□□ -0.43
MDC1-207ENST00000492462 ALLCQ8N6M5 410 aa12.36□□□□□ -0.43
MDC1-207ENST00000492462 CLEC4CQ8WTT0 213 aa12.36□□□□□ -0.43
MDC1-207ENST00000492462 SLC35F5Q8WV83 523 aa12.36□□□□□ -0.43
MDC1-207ENST00000492462 KCTD13Q8WZ19 329 aa12.36□□□□□ -0.43
MDC1-207ENST00000492462 EDEM1Q92611 657 aa12.36□□□□□ -0.43
MDC1-207ENST00000492462 BHMTQ93088 406 aa12.36□□□□□ -0.43
MDC1-207ENST00000492462 PARD6AQ9NPB6 346 aa12.36□□□□□ -0.43
MDC1-207ENST00000492462 UBE2TQ9NPD8 197 aaPredicted RBP12.36□□□□□ -0.43
MDC1-207ENST00000492462 MARCH2Q9P0N8 246 aa12.36□□□□□ -0.43
MDC1-207ENST00000492462 LSM7Q9UK45 103 aaKnown RBP12.36□□□□□ -0.43
MDC1-207ENST00000492462 AJAP1Q9UKB5 411 aaPredicted RBP12.36□□□□□ -0.43
MDC1-207ENST00000492462 CNTN6Q9UQ52 1028 aa12.36□□□□□ -0.43
MDC1-207ENST00000492462 A0A0A0MRY4 1105 aa12.35□□□□□ -0.43
MDC1-207ENST00000492462 SLC12A8A0AV02 714 aa12.35□□□□□ -0.43
MDC1-207ENST00000492462 BECN2A8MW95 431 aa12.35□□□□□ -0.43
MDC1-207ENST00000492462 NEDD8-MDP1E9PL57 170 aa12.35□□□□□ -0.43
MDC1-207ENST00000492462 SGK1O00141 431 aa12.35□□□□□ -0.43
MDC1-207ENST00000492462 KLF8O95600 359 aaPredicted RBP12.35□□□□□ -0.43
MDC1-207ENST00000492462 APODP05090 189 aa12.35□□□□□ -0.43
MDC1-207ENST00000492462 KRT5P13647 590 aa12.35□□□□□ -0.43
MDC1-207ENST00000492462 TYRP14679 529 aa12.35□□□□□ -0.43
MDC1-207ENST00000492462 TIE1P35590 1138 aa12.35□□□□□ -0.43
MDC1-207ENST00000492462 GRIA2P42262 883 aa12.35□□□□□ -0.43
MDC1-207ENST00000492462 KIR2DL1P43626 348 aaPredicted RBP12.35□□□□□ -0.43
MDC1-207ENST00000492462 DAOAP59103 153 aa12.35□□□□□ -0.43
MDC1-207ENST00000492462 BSPRYQ5W0U4 402 aa12.35□□□□□ -0.43
MDC1-207ENST00000492462 BTBD8Q5XKL5 378 aa12.35□□□□□ -0.43
MDC1-207ENST00000492462 DENND1BQ6P3S1 775 aa12.35□□□□□ -0.43
MDC1-207ENST00000492462 TMEM92Q6UXU6 159 aa12.35□□□□□ -0.43
MDC1-207ENST00000492462 TOGARAM2Q6ZUX3 1019 aa12.35□□□□□ -0.43
MDC1-207ENST00000492462 RSRC2Q7L4I2 434 aaKnown RBP12.35□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 69.9 ms