RNA–Protein interactions for RNA: ENST00000491165.5

USF3-203, Transcript of upstream transcription factor family member 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene USF3, Length 2,133 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF3-203ENST00000491165 CNGA2Q16280 664 aa23.74■■□□□ 1.39
USF3-203ENST00000491165 CTXN3Q4LDR2 81 aa23.74■■□□□ 1.39
USF3-203ENST00000491165 FUKQ8N0W3 1084 aa23.74■■□□□ 1.39
USF3-203ENST00000491165 SLC2A14Q8TDB8 520 aa23.74■■□□□ 1.39
USF3-203ENST00000491165 TNIP3Q96KP6 325 aa23.74■■□□□ 1.39
USF3-203ENST00000491165 TMEM30AQ9NV96 361 aa23.74■■□□□ 1.39
USF3-203ENST00000491165 HAUS2Q9NVX0 235 aa23.74■■□□□ 1.39
USF3-203ENST00000491165 CDH9Q9ULB4 789 aa23.74■■□□□ 1.39
USF3-203ENST00000491165 CHUKO15111 745 aa23.74■■□□□ 1.39
USF3-203ENST00000491165 TP73O15350 636 aa23.74■■□□□ 1.39
USF3-203ENST00000491165 DNAJC8O75937 253 aaPredicted RBP23.74■■□□□ 1.39
USF3-203ENST00000491165 FAM171BQ6P995 826 aa23.74■■□□□ 1.39
USF3-203ENST00000491165 CYB5D1Q6P9G0 228 aa23.74■■□□□ 1.39
USF3-203ENST00000491165 TTC30AQ86WT1 665 aa23.74■■□□□ 1.39
USF3-203ENST00000491165 WDTC1Q8N5D0 677 aa23.74■■□□□ 1.39
USF3-203ENST00000491165 SNF8Q96H20 258 aa23.74■■□□□ 1.39
USF3-203ENST00000491165 DDX23Q9BUQ8 820 aaKnown RBP23.74■■□□□ 1.39
USF3-203ENST00000491165 NKX2-4Q9H2Z4 354 aa23.74■■□□□ 1.39
USF3-203ENST00000491165 AVENQ9NQS1 362 aaPredicted RBP23.74■■□□□ 1.39
USF3-203ENST00000491165 HOMER3Q9NSC5 361 aa23.74■■□□□ 1.39
USF3-203ENST00000491165 ATG2AQ2TAZ0 1938 aa23.73■■□□□ 1.39
USF3-203ENST00000491165 ARHGEF37A1IGU5 675 aa23.73■■□□□ 1.39
USF3-203ENST00000491165 VIMP08670 466 aaKnown RBP23.73■■□□□ 1.39
USF3-203ENST00000491165 UNGP13051 313 aaPredicted RBP23.73■■□□□ 1.39
USF3-203ENST00000491165 PCSK1P29120 753 aa23.73■■□□□ 1.39
USF3-203ENST00000491165 DSG1Q02413 1049 aa23.73■■□□□ 1.39
USF3-203ENST00000491165 MLLT1Q03111 559 aaPredicted RBP23.73■■□□□ 1.39
USF3-203ENST00000491165 XRCC4Q13426 336 aa23.73■■□□□ 1.39
USF3-203ENST00000491165 CCDC38Q502W7 563 aa23.73■■□□□ 1.39
USF3-203ENST00000491165 DENND1BQ6P3S1 775 aa23.73■■□□□ 1.39
USF3-203ENST00000491165 RHBDF2Q6PJF5 856 aa23.73■■□□□ 1.39
USF3-203ENST00000491165 EXOC3L1Q86VI1 746 aa23.73■■□□□ 1.39
USF3-203ENST00000491165 GRK7Q8WTQ7 553 aa23.73■■□□□ 1.39
USF3-203ENST00000491165 SGSM3Q96HU1 749 aa23.73■■□□□ 1.39
USF3-203ENST00000491165 SERPINB12Q96P63 405 aa23.73■■□□□ 1.39
USF3-203ENST00000491165 HERC2P3Q9BVR0 1158 aa23.73■■□□□ 1.39
USF3-203ENST00000491165 CYTH4Q9UIA0 394 aa23.73■■□□□ 1.39
USF3-203ENST00000491165 SBDSQ9Y3A5 250 aaKnown RBP eCLIP23.73■■□□□ 1.39
USF3-203ENST00000491165 C5orf67F2Z3F1 127 aa23.72■■□□□ 1.39
USF3-203ENST00000491165 MICAL2O94851 1124 aa23.72■■□□□ 1.39
USF3-203ENST00000491165 ACSL3O95573 720 aa23.72■■□□□ 1.39
USF3-203ENST00000491165 MYBL1P10243 752 aa23.72■■□□□ 1.39
USF3-203ENST00000491165 ADORA2BP29275 332 aa23.72■■□□□ 1.39
USF3-203ENST00000491165 SLC1A1P43005 524 aa23.72■■□□□ 1.39
USF3-203ENST00000491165 IFNAR2P48551 515 aa23.72■■□□□ 1.39
USF3-203ENST00000491165 CACNA2D1P54289 1103 aa23.72■■□□□ 1.39
USF3-203ENST00000491165 PTK6Q13882 451 aa23.72■■□□□ 1.39
USF3-203ENST00000491165 CAMK1Q14012 370 aa23.72■■□□□ 1.39
USF3-203ENST00000491165 LONRF1Q17RB8 773 aa23.72■■□□□ 1.39
USF3-203ENST00000491165 ZNF280DQ6N043 979 aa23.72■■□□□ 1.39
USF3-203ENST00000491165 ZNF677Q86XU0 584 aa23.72■■□□□ 1.39
USF3-203ENST00000491165 MCOLN2Q8IZK6 566 aa23.72■■□□□ 1.39
USF3-203ENST00000491165 THEM5Q8N1Q8 247 aa23.72■■□□□ 1.39
USF3-203ENST00000491165 UBA3Q8TBC4 463 aa23.72■■□□□ 1.39
USF3-203ENST00000491165 TRIM11Q96F44 468 aa23.72■■□□□ 1.39
USF3-203ENST00000491165 B3GNT5Q9BYG0 378 aa23.72■■□□□ 1.39
USF3-203ENST00000491165 ZBP1Q9H171 429 aa23.72■■□□□ 1.39
USF3-203ENST00000491165 PCDHGC3Q9UN70 934 aa23.72■■□□□ 1.39
USF3-203ENST00000491165 MYO9BQ13459 2157 aa23.72■■□□□ 1.39
USF3-203ENST00000491165 TRIOBPQ9H2D6 2365 aa23.72■■□□□ 1.39
USF3-203ENST00000491165 GAS8O95995 478 aa23.72■■□□□ 1.39
USF3-203ENST00000491165 ATP5DP30049 168 aa23.72■■□□□ 1.39
USF3-203ENST00000491165 ERVFC1P60507 584 aa23.72■■□□□ 1.39
USF3-203ENST00000491165 CCDC91Q7Z6B0 441 aa23.72■■□□□ 1.39
USF3-203ENST00000491165 PARP9Q8IXQ6 854 aa23.72■■□□□ 1.39
USF3-203ENST00000491165 IPO4Q8TEX9 1081 aaKnown RBP23.72■■□□□ 1.39
USF3-203ENST00000491165 MYLPFQ96A32 169 aa23.72■■□□□ 1.39
USF3-203ENST00000491165 ZCWPW1Q9H0M4 648 aa23.72■■□□□ 1.39
USF3-203ENST00000491165 CDY1Q9Y6F8 540 aa23.72■■□□□ 1.39
USF3-203ENST00000491165 BEST1O76090 585 aa23.71■■□□□ 1.39
USF3-203ENST00000491165 GLUD2P49448 558 aa23.71■■□□□ 1.39
USF3-203ENST00000491165 PSMD5Q16401 504 aa23.71■■□□□ 1.39
USF3-203ENST00000491165 SLC39A12Q504Y0 691 aa23.71■■□□□ 1.39
USF3-203ENST00000491165 PKDCCQ504Y2 493 aa23.71■■□□□ 1.39
USF3-203ENST00000491165 C2CD6Q53TS8 623 aa23.71■■□□□ 1.39
USF3-203ENST00000491165 KIAA1841Q6NSI8 718 aa23.71■■□□□ 1.39
USF3-203ENST00000491165 LCLAT1Q6UWP7 414 aa23.71■■□□□ 1.39
USF3-203ENST00000491165 ANKS3Q6ZW76 656 aa23.71■■□□□ 1.39
USF3-203ENST00000491165 CCDC50Q8IVM0 306 aa23.71■■□□□ 1.39
USF3-203ENST00000491165 SPPL3Q8TCT6 385 aa23.71■■□□□ 1.39
USF3-203ENST00000491165 CPA5Q8WXQ8 436 aa23.71■■□□□ 1.39
USF3-203ENST00000491165 ELAC2Q9BQ52 826 aaKnown RBP23.71■■□□□ 1.39
USF3-203ENST00000491165 CLSTN3Q9BQT9 956 aa23.71■■□□□ 1.39
USF3-203ENST00000491165 ZNF518BQ9C0D4 1074 aa23.71■■□□□ 1.39
USF3-203ENST00000491165 YY1AP1Q9H869 796 aa23.71■■□□□ 1.39
USF3-203ENST00000491165 MTRRQ9UBK8 725 aa23.71■■□□□ 1.39
USF3-203ENST00000491165 C5orf42Q9H799 3197 aa23.71■■□□□ 1.39
USF3-203ENST00000491165 CYP1A1P04798 512 aaPredicted RBP23.71■■□□□ 1.39
USF3-203ENST00000491165 CAV1Q03135 178 aa23.71■■□□□ 1.39
USF3-203ENST00000491165 SNCBQ16143 134 aa23.71■■□□□ 1.39
USF3-203ENST00000491165 GOLGA7BQ2TAP0 167 aa23.71■■□□□ 1.39
USF3-203ENST00000491165 ARHGAP17Q68EM7 881 aa23.71■■□□□ 1.39
USF3-203ENST00000491165 SMYD5Q6GMV2 418 aa23.71■■□□□ 1.39
USF3-203ENST00000491165 FBXO22Q8NEZ5 403 aa23.71■■□□□ 1.39
USF3-203ENST00000491165 ATG4AQ8WYN0 398 aa23.71■■□□□ 1.39
USF3-203ENST00000491165 PGLYRP2Q96PD5 576 aa23.71■■□□□ 1.39
USF3-203ENST00000491165 TGS1Q96RS0 853 aaKnown RBP23.71■■□□□ 1.39
USF3-203ENST00000491165 CD248Q9HCU0 757 aa23.71■■□□□ 1.39
USF3-203ENST00000491165 KIAA1257Q9ULG3 409 aa23.71■■□□□ 1.39
USF3-203ENST00000491165 M0QYV0 167 aa23.7■■□□□ 1.38
Retrieved 100 of 20,778 RNA–protein pairs in 67.5 ms