RNA–Protein interactions for RNA: ENST00000490283.1

SEC13-218, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 2

Gene SEC13, Length 740 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-218ENST00000490283 ARHGEF19Q8IW93 802 aa18.3■□□□□ 0.52
SEC13-218ENST00000490283 GAB3Q8WWW8 586 aa18.3■□□□□ 0.52
SEC13-218ENST00000490283 KCTD13Q8WZ19 329 aa18.3■□□□□ 0.52
SEC13-218ENST00000490283 GOLGA1Q92805 767 aa18.3■□□□□ 0.52
SEC13-218ENST00000490283 KAT5Q92993 513 aa18.3■□□□□ 0.52
SEC13-218ENST00000490283 WBP2Q969T9 261 aa18.3■□□□□ 0.52
SEC13-218ENST00000490283 GBP4Q96PP9 640 aa18.3■□□□□ 0.52
SEC13-218ENST00000490283 MARCH2Q9P0N8 246 aa18.3■□□□□ 0.52
SEC13-218ENST00000490283 WDR3Q9UNX4 943 aaKnown RBP eCLIP18.3■□□□□ 0.52
SEC13-218ENST00000490283 TULP2O00295 520 aa18.29■□□□□ 0.52
SEC13-218ENST00000490283 TULP3O75386 442 aa18.29■□□□□ 0.52
SEC13-218ENST00000490283 STC2O76061 302 aa18.29■□□□□ 0.52
SEC13-218ENST00000490283 ALDH1A2O94788 518 aa18.29■□□□□ 0.52
SEC13-218ENST00000490283 RETP07949 1114 aa18.29■□□□□ 0.52
SEC13-218ENST00000490283 HMBSP08397 361 aa18.29■□□□□ 0.52
SEC13-218ENST00000490283 LCP1P13796 627 aa18.29■□□□□ 0.52
SEC13-218ENST00000490283 BRD2P25440 801 aaKnown RBP18.29■□□□□ 0.52
SEC13-218ENST00000490283 TIE1P35590 1138 aa18.29■□□□□ 0.52
SEC13-218ENST00000490283 CHKAP35790 457 aa18.29■□□□□ 0.52
SEC13-218ENST00000490283 MFAP3P55082 362 aa18.29■□□□□ 0.52
SEC13-218ENST00000490283 SRSF5Q13243 272 aaKnown RBP18.29■□□□□ 0.52
SEC13-218ENST00000490283 EOGTQ5NDL2 527 aa18.29■□□□□ 0.52
SEC13-218ENST00000490283 GRAMD4Q6IC98 578 aa18.29■□□□□ 0.52
SEC13-218ENST00000490283 GBP6Q6ZN66 633 aa18.29■□□□□ 0.52
SEC13-218ENST00000490283 ETFBKMTQ8IXQ9 262 aa18.29■□□□□ 0.52
SEC13-218ENST00000490283 TFAP2BQ92481 460 aa18.29■□□□□ 0.52
SEC13-218ENST00000490283 UBE2TQ9NPD8 197 aaPredicted RBP18.29■□□□□ 0.52
SEC13-218ENST00000490283 CNGB3Q9NQW8 809 aa18.29■□□□□ 0.52
SEC13-218ENST00000490283 DNAJC17Q9NVM6 304 aaKnown RBP18.29■□□□□ 0.52
SEC13-218ENST00000490283 MMP17Q9ULZ9 603 aa18.29■□□□□ 0.52
SEC13-218ENST00000490283 USP18Q9UMW8 372 aa18.29■□□□□ 0.52
SEC13-218ENST00000490283 EP300Q09472 2414 aaPredicted RBP18.28■□□□□ 0.52
SEC13-218ENST00000490283 GVINP1Q7Z2Y8 2422 aa18.28■□□□□ 0.52
SEC13-218ENST00000490283 SLC12A8A0AV02 714 aa18.28■□□□□ 0.52
SEC13-218ENST00000490283 GOLGA6L22H0YM25 854 aa18.28■□□□□ 0.52
SEC13-218ENST00000490283 MED7O43513 233 aa18.28■□□□□ 0.52
SEC13-218ENST00000490283 GREM1O60565 184 aa18.28■□□□□ 0.52
SEC13-218ENST00000490283 TYRP14679 529 aa18.28■□□□□ 0.52
SEC13-218ENST00000490283 CORO1AP31146 461 aaKnown RBP18.28■□□□□ 0.52
SEC13-218ENST00000490283 ID4P47928 161 aa18.28■□□□□ 0.52
SEC13-218ENST00000490283 DGKEP52429 567 aa18.28■□□□□ 0.52
SEC13-218ENST00000490283 C10orf76Q5T2E6 689 aa18.28■□□□□ 0.52
SEC13-218ENST00000490283 Q6ZNB5 142 aa18.28■□□□□ 0.52
SEC13-218ENST00000490283 CACNA2D4Q7Z3S7 1137 aa18.28■□□□□ 0.52
SEC13-218ENST00000490283 CCDC33Q8N5R6 958 aa18.28■□□□□ 0.52
SEC13-218ENST00000490283 TERB1Q8NA31 727 aa18.28■□□□□ 0.52
SEC13-218ENST00000490283 PLD4Q96BZ4 506 aa18.28■□□□□ 0.52
SEC13-218ENST00000490283 ABCC13Q9NSE7 274 aa18.28■□□□□ 0.52
SEC13-218ENST00000490283 POLR3BQ9NW08 1133 aaPredicted RBP18.28■□□□□ 0.52
SEC13-218ENST00000490283 MARK1Q9P0L2 795 aa18.28■□□□□ 0.52
SEC13-218ENST00000490283 A0A0A0MRY4 1105 aa18.27■□□□□ 0.52
SEC13-218ENST00000490283 RNF225M0QZC1 329 aaPredicted RBP18.27■□□□□ 0.52
SEC13-218ENST00000490283 CACNG3O60359 315 aa18.27■□□□□ 0.52
SEC13-218ENST00000490283 KLF8O95600 359 aaPredicted RBP18.27■□□□□ 0.52
SEC13-218ENST00000490283 CYBBP04839 570 aa18.27■□□□□ 0.52
SEC13-218ENST00000490283 ERCC5P28715 1186 aaPredicted RBP18.27■□□□□ 0.52
SEC13-218ENST00000490283 RGS7P49802 495 aa18.27■□□□□ 0.52
SEC13-218ENST00000490283 EXOC3L4Q17RC7 722 aa18.27■□□□□ 0.52
SEC13-218ENST00000490283 PKDCCQ504Y2 493 aa18.27■□□□□ 0.52
SEC13-218ENST00000490283 BSPRYQ5W0U4 402 aa18.27■□□□□ 0.52
SEC13-218ENST00000490283 CLEC17AQ6ZS10 378 aa18.27■□□□□ 0.52
SEC13-218ENST00000490283 SCML4Q8N228 414 aa18.27■□□□□ 0.52
SEC13-218ENST00000490283 ALLCQ8N6M5 410 aa18.27■□□□□ 0.52
SEC13-218ENST00000490283 TXNDC5Q8NBS9 432 aaKnown RBP18.27■□□□□ 0.52
SEC13-218ENST00000490283 KCNV2Q8TDN2 545 aa18.27■□□□□ 0.52
SEC13-218ENST00000490283 HSFY1Q96LI6 401 aa18.27■□□□□ 0.52
SEC13-218ENST00000490283 KREMEN1Q96MU8 473 aa18.27■□□□□ 0.52
SEC13-218ENST00000490283 CRACR2AQ9BSW2 395 aa18.27■□□□□ 0.52
SEC13-218ENST00000490283 THAP9Q9H5L6 903 aa18.27■□□□□ 0.52
SEC13-218ENST00000490283 POLMQ9NP87 494 aaPredicted RBP18.27■□□□□ 0.52
SEC13-218ENST00000490283 EBF1Q9UH73 591 aa18.27■□□□□ 0.52
SEC13-218ENST00000490283 VPS13AQ96RL7 3174 aa18.26■□□□□ 0.51
SEC13-218ENST00000490283 OTOGLQ3ZCN5 2332 aa18.26■□□□□ 0.51
SEC13-218ENST00000490283 GTPBP10A4D1E9 387 aaKnown RBP18.26■□□□□ 0.51
SEC13-218ENST00000490283 LRP3O75074 770 aa18.26■□□□□ 0.51
SEC13-218ENST00000490283 FBXO21O94952 628 aa18.26■□□□□ 0.51
SEC13-218ENST00000490283 HOXC13P31276 330 aa18.26■□□□□ 0.51
SEC13-218ENST00000490283 HARS2P49590 506 aaKnown RBP18.26■□□□□ 0.51
SEC13-218ENST00000490283 ZNF132P52740 706 aa18.26■□□□□ 0.51
SEC13-218ENST00000490283 DAOAP59103 153 aa18.26■□□□□ 0.51
SEC13-218ENST00000490283 LMNB2Q03252 620 aa18.26■□□□□ 0.51
SEC13-218ENST00000490283 ELF2Q15723 593 aa18.26■□□□□ 0.51
SEC13-218ENST00000490283 CRY1Q16526 586 aa18.26■□□□□ 0.51
SEC13-218ENST00000490283 ANO7Q6IWH7 933 aa18.26■□□□□ 0.51
SEC13-218ENST00000490283 TRIM65Q6PJ69 517 aa18.26■□□□□ 0.51
SEC13-218ENST00000490283 PHTF2Q8N3S3 785 aa18.26■□□□□ 0.51
SEC13-218ENST00000490283 FAM160A2Q8N612 972 aaPredicted RBP18.26■□□□□ 0.51
SEC13-218ENST00000490283 ZNF513Q8N8E2 541 aaPredicted RBP18.26■□□□□ 0.51
SEC13-218ENST00000490283 IL17RCQ8NAC3 791 aa18.26■□□□□ 0.51
SEC13-218ENST00000490283 SLC35F5Q8WV83 523 aa18.26■□□□□ 0.51
SEC13-218ENST00000490283 IRGQQ8WZA9 623 aa18.26■□□□□ 0.51
SEC13-218ENST00000490283 NDRG1Q92597 394 aaKnown RBP18.26■□□□□ 0.51
SEC13-218ENST00000490283 EDEM1Q92611 657 aa18.26■□□□□ 0.51
SEC13-218ENST00000490283 HBS1LQ9Y450 684 aaKnown RBP18.26■□□□□ 0.51
SEC13-218ENST00000490283 GPR179Q6PRD1 2367 aa18.26■□□□□ 0.51
SEC13-218ENST00000490283 DMDP11532 3685 aa18.26■□□□□ 0.51
SEC13-218ENST00000490283 YJEFN3A6XGL0 299 aa18.25■□□□□ 0.51
SEC13-218ENST00000490283 E7ENQ6 273 aa18.25■□□□□ 0.51
SEC13-218ENST00000490283 ZBTB24O43167 697 aaPredicted RBP18.25■□□□□ 0.51
SEC13-218ENST00000490283 SART1O43290 800 aaKnown RBP18.25■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 54.1 ms