RNA–Protein interactions for RNA: ENST00000489927.1

PLOD3-216, Transcript of procollagen-lysine,2-oxoglutarate 5-dioxygenase 3, humanhuman

TSL 2

Gene PLOD3, Length 562 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PLOD3-216ENST00000489927 SERTAD1Q9UHV2 236 aa16.75■□□□□ 0.27
PLOD3-216ENST00000489927 LSM7Q9UK45 103 aaKnown RBP16.75■□□□□ 0.27
PLOD3-216ENST00000489927 CYP8B1Q9UNU6 501 aa16.75■□□□□ 0.27
PLOD3-216ENST00000489927 SCML2Q9UQR0 700 aa16.75■□□□□ 0.27
PLOD3-216ENST00000489927 RAD54BQ9Y620 910 aa16.75■□□□□ 0.27
PLOD3-216ENST00000489927 IGF2RP11717 2491 aa16.75■□□□□ 0.27
PLOD3-216ENST00000489927 TMEM8BA6NDV4 472 aa16.74■□□□□ 0.27
PLOD3-216ENST00000489927 UPK3BL1B0FP48 263 aa16.74■□□□□ 0.27
PLOD3-216ENST00000489927 HHLA1C9JL84 531 aa16.74■□□□□ 0.27
PLOD3-216ENST00000489927 UPK3BL2E5RIL1 263 aa16.74■□□□□ 0.27
PLOD3-216ENST00000489927 MDM4O15151 490 aa16.74■□□□□ 0.27
PLOD3-216ENST00000489927 ZBTB24O43167 697 aaPredicted RBP16.74■□□□□ 0.27
PLOD3-216ENST00000489927 ZNF217O75362 1048 aa16.74■□□□□ 0.27
PLOD3-216ENST00000489927 NR3C1P04150 777 aa16.74■□□□□ 0.27
PLOD3-216ENST00000489927 SIM1P81133 766 aaPredicted RBP16.74■□□□□ 0.27
PLOD3-216ENST00000489927 GOLGA8FQ08AF8 430 aa16.74■□□□□ 0.27
PLOD3-216ENST00000489927 GOLGA8DPQ0D2H9 430 aa16.74■□□□□ 0.27
PLOD3-216ENST00000489927 C1orf220Q5T0J3 134 aa16.74■□□□□ 0.27
PLOD3-216ENST00000489927 HDDC3Q8N4P3 179 aa16.74■□□□□ 0.27
PLOD3-216ENST00000489927 BHMTQ93088 406 aa16.74■□□□□ 0.27
PLOD3-216ENST00000489927 PAGE5Q96GU1 130 aa16.74■□□□□ 0.27
PLOD3-216ENST00000489927 HSPA12BQ96MM6 686 aa16.74■□□□□ 0.27
PLOD3-216ENST00000489927 HNRNPABQ99729 332 aaKnown RBP16.74■□□□□ 0.27
PLOD3-216ENST00000489927 BACH2Q9BYV9 841 aa16.74■□□□□ 0.27
PLOD3-216ENST00000489927 SLC6A17Q9H1V8 727 aa16.74■□□□□ 0.27
PLOD3-216ENST00000489927 CD93Q9NPY3 652 aa16.74■□□□□ 0.27
PLOD3-216ENST00000489927 UTP3Q9NQZ2 479 aaKnown RBP eCLIP16.74■□□□□ 0.27
PLOD3-216ENST00000489927 EXOC1Q9NV70 894 aa16.74■□□□□ 0.27
PLOD3-216ENST00000489927 NUDT5Q9UKK9 219 aa16.74■□□□□ 0.27
PLOD3-216ENST00000489927 ASCC3Q8N3C0 2202 aaKnown RBP16.74■□□□□ 0.27
PLOD3-216ENST00000489927 A0A1W2PQH9 124 aa16.73■□□□□ 0.27
PLOD3-216ENST00000489927 PDXKO00764 312 aa16.73■□□□□ 0.27
PLOD3-216ENST00000489927 ACTN4O43707 911 aaKnown RBP16.73■□□□□ 0.27
PLOD3-216ENST00000489927 HLA-DRAP01903 254 aa16.73■□□□□ 0.27
PLOD3-216ENST00000489927 SLFN14P0C7P3 912 aa16.73■□□□□ 0.27
PLOD3-216ENST00000489927 ZSCAN22P10073 491 aaPredicted RBP16.73■□□□□ 0.27
PLOD3-216ENST00000489927 RARGP13631 454 aa16.73■□□□□ 0.27
PLOD3-216ENST00000489927 ACO1P21399 889 aaKnown RBP16.73■□□□□ 0.27
PLOD3-216ENST00000489927 PIK3CAP42336 1068 aa16.73■□□□□ 0.27
PLOD3-216ENST00000489927 DGKGP49619 791 aa16.73■□□□□ 0.27
PLOD3-216ENST00000489927 KMT5BQ4FZB7 885 aa16.73■□□□□ 0.27
PLOD3-216ENST00000489927 RABEPKQ7Z6M1 372 aa16.73■□□□□ 0.27
PLOD3-216ENST00000489927 MINDY1Q8N5J2 469 aa16.73■□□□□ 0.27
PLOD3-216ENST00000489927 TRIML1Q8N9V2 468 aa16.73■□□□□ 0.27
PLOD3-216ENST00000489927 OR2I1PQ8NGU4 316 aa16.73■□□□□ 0.27
PLOD3-216ENST00000489927 TMC2Q8TDI7 906 aa16.73■□□□□ 0.27
PLOD3-216ENST00000489927 CYFIP2Q96F07 1278 aa16.73■□□□□ 0.27
PLOD3-216ENST00000489927 P2RY11Q96G91 374 aa16.73■□□□□ 0.27
PLOD3-216ENST00000489927 MTPAPQ9NVV4 582 aaKnown RBP eCLIP16.73■□□□□ 0.27
PLOD3-216ENST00000489927 CACNA2D2Q9NY47 1150 aa16.73■□□□□ 0.27
PLOD3-216ENST00000489927 NEUROG3Q9Y4Z2 214 aa16.73■□□□□ 0.27
PLOD3-216ENST00000489927 PCDH15Q96QU1 1955 aa16.72■□□□□ 0.27
PLOD3-216ENST00000489927 ARHGAP33O14559 1287 aa16.72■□□□□ 0.27
PLOD3-216ENST00000489927 IKBKBO14920 756 aa16.72■□□□□ 0.27
PLOD3-216ENST00000489927 OPHN1O60890 802 aa16.72■□□□□ 0.27
PLOD3-216ENST00000489927 F13A1P00488 732 aa16.72■□□□□ 0.27
PLOD3-216ENST00000489927 CISD3P0C7P0 127 aa16.72■□□□□ 0.27
PLOD3-216ENST00000489927 FAM193AP78312 1265 aa16.72■□□□□ 0.27
PLOD3-216ENST00000489927 INCA1Q0VD86 236 aa16.72■□□□□ 0.27
PLOD3-216ENST00000489927 C10orf120Q5SQS8 335 aa16.72■□□□□ 0.27
PLOD3-216ENST00000489927 CEP135Q66GS9 1140 aa16.72■□□□□ 0.27
PLOD3-216ENST00000489927 KLHDC10Q6PID8 442 aa16.72■□□□□ 0.27
PLOD3-216ENST00000489927 Q6ZNB5 142 aa16.72■□□□□ 0.27
PLOD3-216ENST00000489927 MRGPRX1Q96LB2 322 aa16.72■□□□□ 0.27
PLOD3-216ENST00000489927 PLK2Q9NYY3 685 aa16.72■□□□□ 0.27
PLOD3-216ENST00000489927 DNMT3LQ9UJW3 386 aa16.72■□□□□ 0.27
PLOD3-216ENST00000489927 KLK13Q9UKR3 277 aa16.72■□□□□ 0.27
PLOD3-216ENST00000489927 PCDHA5Q9Y5H7 936 aa16.72■□□□□ 0.27
PLOD3-216ENST00000489927 MYO18AQ92614 2054 aaKnown RBP16.72■□□□□ 0.27
PLOD3-216ENST00000489927 ADAMTS9Q9P2N4 1935 aa16.71■□□□□ 0.27
PLOD3-216ENST00000489927 A0A1W2PQD8 194 aa16.71■□□□□ 0.27
PLOD3-216ENST00000489927 WASH3PC4AMC7 463 aa16.71■□□□□ 0.27
PLOD3-216ENST00000489927 TRIM21P19474 475 aaKnown RBP16.71■□□□□ 0.27
PLOD3-216ENST00000489927 PLA2G4AP47712 749 aa16.71■□□□□ 0.27
PLOD3-216ENST00000489927 ZCCHC14Q8WYQ9 949 aaKnown RBP16.71■□□□□ 0.27
PLOD3-216ENST00000489927 ZNF419Q96HQ0 510 aaPredicted RBP16.71■□□□□ 0.27
PLOD3-216ENST00000489927 NT5C1AQ9BXI3 368 aa16.71■□□□□ 0.27
PLOD3-216ENST00000489927 APOBEC3GQ9HC16 384 aaKnown RBP16.71■□□□□ 0.27
PLOD3-216ENST00000489927 PNPLA8Q9NP80 782 aa16.71■□□□□ 0.27
PLOD3-216ENST00000489927 NAGPAQ9UK23 515 aa16.71■□□□□ 0.27
PLOD3-216ENST00000489927 FRMD4BQ9Y2L6 1034 aa16.71■□□□□ 0.27
PLOD3-216ENST00000489927 CEP192Q8TEP8 1941 aa16.7■□□□□ 0.26
PLOD3-216ENST00000489927 GON4LQ3T8J9 2241 aa16.7■□□□□ 0.26
PLOD3-216ENST00000489927 SRRM3A6NNA2 597 aaPredicted RBP16.7■□□□□ 0.26
PLOD3-216ENST00000489927 GFRA2O00451 464 aa16.7■□□□□ 0.26
PLOD3-216ENST00000489927 NDUFS2O75306 463 aa16.7■□□□□ 0.26
PLOD3-216ENST00000489927 STC2O76061 302 aa16.7■□□□□ 0.26
PLOD3-216ENST00000489927 PDIA4P13667 645 aaKnown RBP16.7■□□□□ 0.26
PLOD3-216ENST00000489927 CD59P13987 128 aa16.7■□□□□ 0.26
PLOD3-216ENST00000489927 CD58P19256 250 aa16.7■□□□□ 0.26
PLOD3-216ENST00000489927 VAMP7P51809 220 aa16.7■□□□□ 0.26
PLOD3-216ENST00000489927 KIF11P52732 1056 aa16.7■□□□□ 0.26
PLOD3-216ENST00000489927 DNM1Q05193 864 aaKnown RBP16.7■□□□□ 0.26
PLOD3-216ENST00000489927 PKP1Q13835 747 aa16.7■□□□□ 0.26
PLOD3-216ENST00000489927 KIAA1324Q6UXG2 1013 aaKnown RBP16.7■□□□□ 0.26
PLOD3-216ENST00000489927 SCD5Q86SK9 330 aa16.7■□□□□ 0.26
PLOD3-216ENST00000489927 RGL4Q8IZJ4 473 aa16.7■□□□□ 0.26
PLOD3-216ENST00000489927 TAS1R2Q8TE23 839 aa16.7■□□□□ 0.26
PLOD3-216ENST00000489927 IMPG2Q9BZV3 1241 aa16.7■□□□□ 0.26
PLOD3-216ENST00000489927 DNAAF2Q9NVR5 837 aaKnown RBP16.7■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms