RNA–Protein interactions for RNA: ENST00000489868.5

CCDC39-206, Transcript of coiled-coil domain containing 39, humanhuman

TSL 3

Gene CCDC39, Length 534 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC39-206ENST00000489868 C8orf58Q8NAV2 365 aa6.13□□□□□ -1.43
CCDC39-206ENST00000489868 CCDC150Q8NCX0 1101 aa6.13□□□□□ -1.43
CCDC39-206ENST00000489868 DEPTORQ8TB45 409 aa6.13□□□□□ -1.43
CCDC39-206ENST00000489868 ZNF566Q969W8 418 aa6.13□□□□□ -1.43
CCDC39-206ENST00000489868 ELAC2Q9BQ52 826 aaKnown RBP6.13□□□□□ -1.43
CCDC39-206ENST00000489868 DDX24Q9GZR7 859 aaKnown RBP eCLIP6.13□□□□□ -1.43
CCDC39-206ENST00000489868 TFCP2L1Q9NZI6 479 aa6.13□□□□□ -1.43
CCDC39-206ENST00000489868 FLRT1Q9NZU1 646 aa6.13□□□□□ -1.43
CCDC39-206ENST00000489868 DHHO43323 396 aa6.12□□□□□ -1.43
CCDC39-206ENST00000489868 CYP2D6P10635 497 aa6.12□□□□□ -1.43
CCDC39-206ENST00000489868 GRM1Q13255 1194 aa6.12□□□□□ -1.43
CCDC39-206ENST00000489868 SEC23BQ15437 767 aa6.12□□□□□ -1.43
CCDC39-206ENST00000489868 FAM186BQ8IYM0 893 aa6.12□□□□□ -1.43
CCDC39-206ENST00000489868 DDX51Q8N8A6 666 aaKnown RBP eCLIP6.12□□□□□ -1.43
CCDC39-206ENST00000489868 PNISRQ8TF01 805 aaKnown RBP6.12□□□□□ -1.43
CCDC39-206ENST00000489868 ABHD5Q8WTS1 349 aa6.12□□□□□ -1.43
CCDC39-206ENST00000489868 C5orf34Q96MH7 638 aa6.12□□□□□ -1.43
CCDC39-206ENST00000489868 QTRT1Q9BXR0 403 aaKnown RBP6.12□□□□□ -1.43
CCDC39-206ENST00000489868 PDGFCQ9NRA1 345 aa6.12□□□□□ -1.43
CCDC39-206ENST00000489868 COL3A1P02461 1466 aaPredicted RBP6.11□□□□□ -1.43
CCDC39-206ENST00000489868 CCDC194A0A1B0GVG4 234 aa6.11□□□□□ -1.43
CCDC39-206ENST00000489868 H3BNC9 293 aa6.11□□□□□ -1.43
CCDC39-206ENST00000489868 PODXLO00592 558 aa6.11□□□□□ -1.43
CCDC39-206ENST00000489868 CCNT2O60583 730 aaKnown RBP6.11□□□□□ -1.43
CCDC39-206ENST00000489868 PLA2G6O60733 806 aa6.11□□□□□ -1.43
CCDC39-206ENST00000489868 CHRM5P08912 532 aaPredicted RBP6.11□□□□□ -1.43
CCDC39-206ENST00000489868 GALNSP34059 522 aa6.11□□□□□ -1.43
CCDC39-206ENST00000489868 CFHR3Q02985 330 aa6.11□□□□□ -1.43
CCDC39-206ENST00000489868 DNASE1L3Q13609 305 aa6.11□□□□□ -1.43
CCDC39-206ENST00000489868 ATP1A4Q13733 1029 aa6.11□□□□□ -1.43
CCDC39-206ENST00000489868 LARS2Q15031 903 aaKnown RBP6.11□□□□□ -1.43
CCDC39-206ENST00000489868 MAPKAPK3Q16644 382 aa6.11□□□□□ -1.43
CCDC39-206ENST00000489868 TMEM196Q5HYL7 178 aa6.11□□□□□ -1.43
CCDC39-206ENST00000489868 FAM90A2PQ658T7 463 aa6.11□□□□□ -1.43
CCDC39-206ENST00000489868 NOL8Q76FK4 1167 aaKnown RBP6.11□□□□□ -1.43
CCDC39-206ENST00000489868 C12orf76Q8N812 135 aaPredicted RBP6.11□□□□□ -1.43
CCDC39-206ENST00000489868 ADAMTS18Q8TE60 1221 aa6.11□□□□□ -1.43
CCDC39-206ENST00000489868 TNIP3Q96KP6 325 aa6.11□□□□□ -1.43
CCDC39-206ENST00000489868 ZCWPW1Q9H0M4 648 aa6.11□□□□□ -1.43
CCDC39-206ENST00000489868 USP29Q9HBJ7 922 aa6.11□□□□□ -1.43
CCDC39-206ENST00000489868 NLRC4Q9NPP4 1024 aa6.11□□□□□ -1.43
CCDC39-206ENST00000489868 FSCN3Q9NQT6 498 aa6.11□□□□□ -1.43
CCDC39-206ENST00000489868 GAR1Q9NY12 217 aaKnown RBP6.11□□□□□ -1.43
CCDC39-206ENST00000489868 TMOD4Q9NZQ9 345 aa6.11□□□□□ -1.43
CCDC39-206ENST00000489868 CDC23Q9UJX2 597 aa6.11□□□□□ -1.43
CCDC39-206ENST00000489868 GCATO75600 419 aa6.1□□□□□ -1.43
CCDC39-206ENST00000489868 IFIT2P09913 472 aaKnown RBP6.1□□□□□ -1.43
CCDC39-206ENST00000489868 DRD1P21728 446 aa6.1□□□□□ -1.43
CCDC39-206ENST00000489868 SFPQP23246 707 aaKnown RBP eCLIP6.1□□□□□ -1.43
CCDC39-206ENST00000489868 EPHB2P29323 1055 aa6.1□□□□□ -1.43
CCDC39-206ENST00000489868 RAE1P78406 368 aaKnown RBP6.1□□□□□ -1.43
CCDC39-206ENST00000489868 KCNJ12Q14500 433 aa6.1□□□□□ -1.43
CCDC39-206ENST00000489868 MFSD13AQ14CX5 517 aa6.1□□□□□ -1.43
CCDC39-206ENST00000489868 RAB30Q15771 203 aa6.1□□□□□ -1.43
CCDC39-206ENST00000489868 SUPT20HL1Q3ZLR7 823 aa6.1□□□□□ -1.43
CCDC39-206ENST00000489868 DGKKQ5KSL6 1271 aa6.1□□□□□ -1.43
CCDC39-206ENST00000489868 DENND2CQ68D51 928 aa6.1□□□□□ -1.43
CCDC39-206ENST00000489868 DCDC5Q6ZRR9 648 aa6.1□□□□□ -1.43
CCDC39-206ENST00000489868 P3H2Q8IVL5 708 aa6.1□□□□□ -1.43
CCDC39-206ENST00000489868 IPO4Q8TEX9 1081 aaKnown RBP6.1□□□□□ -1.43
CCDC39-206ENST00000489868 VPS50Q96JG6 964 aa6.1□□□□□ -1.43
CCDC39-206ENST00000489868 CCDC17Q96LX7 622 aa6.1□□□□□ -1.43
CCDC39-206ENST00000489868 FYTTD1Q96QD9 318 aaKnown RBP6.1□□□□□ -1.43
CCDC39-206ENST00000489868 STK33Q9BYT3 514 aa6.1□□□□□ -1.43
CCDC39-206ENST00000489868 IGSF9Q9P2J2 1179 aa6.1□□□□□ -1.43
CCDC39-206ENST00000489868 FZD4Q9ULV1 537 aa6.1□□□□□ -1.43
CCDC39-206ENST00000489868 PCDHB2Q9Y5E7 798 aa6.1□□□□□ -1.43
CCDC39-206ENST00000489868 BTBD19C9JJ37 291 aa6.09□□□□□ -1.43
CCDC39-206ENST00000489868 M0QZQ0 153 aa6.09□□□□□ -1.43
CCDC39-206ENST00000489868 CLIC1O00299 241 aa6.09□□□□□ -1.43
CCDC39-206ENST00000489868 PCDH17O14917 1159 aa6.09□□□□□ -1.43
CCDC39-206ENST00000489868 FYB1O15117 783 aa6.09□□□□□ -1.43
CCDC39-206ENST00000489868 ZSCAN9O15535 394 aaPredicted RBP6.09□□□□□ -1.43
CCDC39-206ENST00000489868 TMIGD3P0DMS9 266 aaPredicted RBP6.09□□□□□ -1.43
CCDC39-206ENST00000489868 IL6STP40189 918 aaPredicted RBP6.09□□□□□ -1.43
CCDC39-206ENST00000489868 ABCG1P45844 678 aa6.09□□□□□ -1.43
CCDC39-206ENST00000489868 SLC14A1Q13336 389 aa6.09□□□□□ -1.43
CCDC39-206ENST00000489868 KCNB1Q14721 858 aa6.09□□□□□ -1.43
CCDC39-206ENST00000489868 TMEM65Q6PI78 240 aa6.09□□□□□ -1.43
CCDC39-206ENST00000489868 FBXO38Q6PIJ6 1188 aa6.09□□□□□ -1.43
CCDC39-206ENST00000489868 PIK3AP1Q6ZUJ8 805 aa6.09□□□□□ -1.43
CCDC39-206ENST00000489868 KRT73Q86Y46 540 aa6.09□□□□□ -1.43
CCDC39-206ENST00000489868 ZNF398Q8TD17 642 aa6.09□□□□□ -1.43
CCDC39-206ENST00000489868 EFHD1Q9BUP0 239 aa6.09□□□□□ -1.43
CCDC39-206ENST00000489868 EIF2AQ9BY44 585 aaKnown RBP6.09□□□□□ -1.43
CCDC39-206ENST00000489868 ZNF700Q9H0M5 742 aa6.09□□□□□ -1.43
CCDC39-206ENST00000489868 NECTIN3Q9NQS3 549 aa6.09□□□□□ -1.43
CCDC39-206ENST00000489868 SEMA5BQ9P283 1151 aa6.09□□□□□ -1.43
CCDC39-206ENST00000489868 SLC39A10Q9ULF5 831 aa6.09□□□□□ -1.43
CCDC39-206ENST00000489868 DTNAQ9Y4J8 743 aa6.09□□□□□ -1.43
CCDC39-206ENST00000489868 DNAJC9-AS1A6NH13 148 aa6.08□□□□□ -1.44
CCDC39-206ENST00000489868 C16orf96A6NNT2 1141 aa6.08□□□□□ -1.44
CCDC39-206ENST00000489868 UBE2Q2LH0YL09 131 aa6.08□□□□□ -1.44
CCDC39-206ENST00000489868 PPP6CO00743 305 aa6.08□□□□□ -1.44
CCDC39-206ENST00000489868 PLIN1O60240 522 aa6.08□□□□□ -1.44
CCDC39-206ENST00000489868 USP1O94782 785 aa6.08□□□□□ -1.44
CCDC39-206ENST00000489868 TUBB4AP04350 444 aa6.08□□□□□ -1.44
CCDC39-206ENST00000489868 IDEP14735 1019 aa6.08□□□□□ -1.44
CCDC39-206ENST00000489868 PPM1AP35813 382 aa6.08□□□□□ -1.44
CCDC39-206ENST00000489868 TXNL4AP83876 142 aaKnown RBP6.08□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms