RNA–Protein interactions for RNA: ENST00000489357.5

VTI1A-207, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 3

Gene VTI1A, Length 444 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-207ENST00000489357 HERPUD2Q9BSE4 406 aa8.83□□□□□ -1
VTI1A-207ENST00000489357 OSBPL7Q9BZF2 842 aa8.83□□□□□ -1
VTI1A-207ENST00000489357 TRIM6Q9C030 488 aaPredicted RBP8.83□□□□□ -1
VTI1A-207ENST00000489357 IL23AQ9NPF7 189 aa8.83□□□□□ -1
VTI1A-207ENST00000489357 AAASQ9NRG9 546 aa8.83□□□□□ -1
VTI1A-207ENST00000489357 SLC38A7Q9NVC3 462 aa8.83□□□□□ -1
VTI1A-207ENST00000489357 TSPAN16Q9UKR8 245 aa8.83□□□□□ -1
VTI1A-207ENST00000489357 USP18Q9UMW8 372 aa8.83□□□□□ -1
VTI1A-207ENST00000489357 R3HDM2Q9Y2K5 976 aaKnown RBP8.83□□□□□ -1
VTI1A-207ENST00000489357 SQORQ9Y6N5 450 aa8.83□□□□□ -1
VTI1A-207ENST00000489357 C5orf60A6NFR6 353 aa8.82□□□□□ -1
VTI1A-207ENST00000489357 ERVH48-1M5A8F1 160 aa8.82□□□□□ -1
VTI1A-207ENST00000489357 PIRO00625 290 aa8.82□□□□□ -1
VTI1A-207ENST00000489357 PRPSAP2O60256 369 aa8.82□□□□□ -1
VTI1A-207ENST00000489357 NBNO60934 754 aa8.82□□□□□ -1
VTI1A-207ENST00000489357 SPAG6O75602 509 aa8.82□□□□□ -1
VTI1A-207ENST00000489357 NPTXRO95502 500 aa8.82□□□□□ -1
VTI1A-207ENST00000489357 TRUB2O95900 331 aaKnown RBP8.82□□□□□ -1
VTI1A-207ENST00000489357 ZFXP17010 805 aaPredicted RBP8.82□□□□□ -1
VTI1A-207ENST00000489357 TGM2P21980 687 aa8.82□□□□□ -1
VTI1A-207ENST00000489357 HPDP32754 393 aaPredicted RBP8.82□□□□□ -1
VTI1A-207ENST00000489357 PHBP35232 272 aa8.82□□□□□ -1
VTI1A-207ENST00000489357 RAP1GAPP47736 663 aa8.82□□□□□ -1
VTI1A-207ENST00000489357 ATP1A2P50993 1020 aa8.82□□□□□ -1
VTI1A-207ENST00000489357 ARSEP51690 589 aa8.82□□□□□ -1
VTI1A-207ENST00000489357 CDH8P55286 799 aa8.82□□□□□ -1
VTI1A-207ENST00000489357 SLC8A3P57103 927 aa8.82□□□□□ -1
VTI1A-207ENST00000489357 GUCY1A3Q02108 690 aa8.82□□□□□ -1
VTI1A-207ENST00000489357 FPGSQ05932 587 aa8.82□□□□□ -1
VTI1A-207ENST00000489357 BST2Q10589 180 aaKnown RBP8.82□□□□□ -1
VTI1A-207ENST00000489357 PPIGQ13427 754 aaKnown RBP eCLIP8.82□□□□□ -12e-7■■■■□ 19.6
VTI1A-207ENST00000489357 AUHQ13825 339 aaKnown RBP8.82□□□□□ -1
VTI1A-207ENST00000489357 CCDC142Q17RM4 750 aa8.82□□□□□ -1
VTI1A-207ENST00000489357 KIZQ2M2Z5 673 aa8.82□□□□□ -1
VTI1A-207ENST00000489357 P3H1Q32P28 736 aa8.82□□□□□ -1
VTI1A-207ENST00000489357 PPP1R26Q5T8A7 1209 aaPredicted RBP8.82□□□□□ -1
VTI1A-207ENST00000489357 FAM102AQ5T9C2 384 aaPredicted RBP8.82□□□□□ -1
VTI1A-207ENST00000489357 CYP4A22Q5TCH4 519 aa8.82□□□□□ -1
VTI1A-207ENST00000489357 C9orf57Q5W0N0 161 aa8.82□□□□□ -1
VTI1A-207ENST00000489357 LLGL2Q6P1M3 1020 aa8.82□□□□□ -1
VTI1A-207ENST00000489357 SLC26A9Q7LBE3 791 aa8.82□□□□□ -1
VTI1A-207ENST00000489357 RSPH3Q86UC2 560 aa8.82□□□□□ -1
VTI1A-207ENST00000489357 TAX1BP1Q86VP1 789 aa8.82□□□□□ -1
VTI1A-207ENST00000489357 NLRP14Q86W24 1093 aa8.82□□□□□ -1
VTI1A-207ENST00000489357 CDR2LQ86X02 465 aaPredicted RBP8.82□□□□□ -1
VTI1A-207ENST00000489357 PPIL6Q8IXY8 311 aa8.82□□□□□ -1
VTI1A-207ENST00000489357 TMEM199Q8N511 208 aa8.82□□□□□ -1
VTI1A-207ENST00000489357 TOP6BLQ8N6T0 577 aa8.82□□□□□ -1
VTI1A-207ENST00000489357 ANKRD52Q8NB46 1076 aa8.82□□□□□ -1
VTI1A-207ENST00000489357 KCTD6Q8NC69 237 aa8.82□□□□□ -1
VTI1A-207ENST00000489357 SLC35F5Q8WV83 523 aa8.82□□□□□ -1
VTI1A-207ENST00000489357 RAPGEF5Q92565 580 aa8.82□□□□□ -1
VTI1A-207ENST00000489357 HAUS1Q96CS2 278 aa8.82□□□□□ -1
VTI1A-207ENST00000489357 ZBTB10Q96DT7 871 aa8.82□□□□□ -1
VTI1A-207ENST00000489357 HSFY1Q96LI6 401 aa8.82□□□□□ -1
VTI1A-207ENST00000489357 TWNKQ96RR1 684 aa8.82□□□□□ -1
VTI1A-207ENST00000489357 RBM15Q96T37 977 aaKnown RBP eCLIP8.82□□□□□ -1
VTI1A-207ENST00000489357 ZNF670Q9BS34 389 aa8.82□□□□□ -1
VTI1A-207ENST00000489357 HEMGNQ9BXL5 484 aa8.82□□□□□ -1
VTI1A-207ENST00000489357 PPP1R12CQ9BZL4 782 aa8.82□□□□□ -1
VTI1A-207ENST00000489357 NSRP1Q9H0G5 558 aaKnown RBP8.82□□□□□ -1
VTI1A-207ENST00000489357 CHST12Q9NRB3 414 aa8.82□□□□□ -1
VTI1A-207ENST00000489357 METTL5Q9NRN9 209 aaKnown RBP8.82□□□□□ -1
VTI1A-207ENST00000489357 TMEM51Q9NW97 253 aa8.82□□□□□ -1
VTI1A-207ENST00000489357 BCCIPQ9P287 314 aaKnown RBP eCLIP8.82□□□□□ -1
VTI1A-207ENST00000489357 RCOR3Q9P2K3 495 aaPredicted RBP8.82□□□□□ -1
VTI1A-207ENST00000489357 CYTH4Q9UIA0 394 aa8.82□□□□□ -1
VTI1A-207ENST00000489357 DNPEPQ9ULA0 475 aa8.82□□□□□ -1
VTI1A-207ENST00000489357 GBF1Q92538 1859 aa8.81□□□□□ -1
VTI1A-207ENST00000489357 KPNA7A9QM74 516 aa8.81□□□□□ -1
VTI1A-207ENST00000489357 E7EVH7 732 aa8.81□□□□□ -1
VTI1A-207ENST00000489357 GOLGA8SH3BPF8 625 aa8.81□□□□□ -1
VTI1A-207ENST00000489357 M0QZ92 97 aa8.81□□□□□ -1
VTI1A-207ENST00000489357 TULP2O00295 520 aa8.81□□□□□ -1
VTI1A-207ENST00000489357 MCF2LO15068 1137 aa8.81□□□□□ -1
VTI1A-207ENST00000489357 ALOX15BO15296 676 aa8.81□□□□□ -1
VTI1A-207ENST00000489357 CST8O60676 142 aa8.81□□□□□ -1
VTI1A-207ENST00000489357 RECQL4O94761 1208 aa8.81□□□□□ -1
VTI1A-207ENST00000489357 SHBGP04278 402 aa8.81□□□□□ -1
VTI1A-207ENST00000489357 PFKMP08237 780 aa8.81□□□□□ -1
VTI1A-207ENST00000489357 KRT10P13645 584 aa8.81□□□□□ -1
VTI1A-207ENST00000489357 PDGFRAP16234 1089 aa8.81□□□□□ -1
VTI1A-207ENST00000489357 ATP2A2P16615 1042 aaKnown RBP8.81□□□□□ -1
VTI1A-207ENST00000489357 FGFR4P22455 802 aa8.81□□□□□ -1
VTI1A-207ENST00000489357 MIPP30301 263 aa8.81□□□□□ -1
VTI1A-207ENST00000489357 LRPAP1P30533 357 aa8.81□□□□□ -1
VTI1A-207ENST00000489357 SDC4P31431 198 aa8.81□□□□□ -1
VTI1A-207ENST00000489357 NR2C2P49116 596 aa8.81□□□□□ -1
VTI1A-207ENST00000489357 TAF6P49848 677 aa8.81□□□□□ -1
VTI1A-207ENST00000489357 AIF1P55008 147 aa8.81□□□□□ -1
VTI1A-207ENST00000489357 CCL23P55773 120 aa8.81□□□□□ -1
VTI1A-207ENST00000489357 SLC6A3Q01959 620 aa8.81□□□□□ -1
VTI1A-207ENST00000489357 XRCC4Q13426 336 aa8.81□□□□□ -1
VTI1A-207ENST00000489357 SHHQ15465 462 aa8.81□□□□□ -1
VTI1A-207ENST00000489357 TCTN1Q2MV58 587 aa8.81□□□□□ -1
VTI1A-207ENST00000489357 GOLGA7BQ2TAP0 167 aa8.81□□□□□ -1
VTI1A-207ENST00000489357 LRIT3Q3SXY7 679 aa8.81□□□□□ -1
VTI1A-207ENST00000489357 PLEKHG4Q58EX7 1191 aa8.81□□□□□ -1
VTI1A-207ENST00000489357 C9orf50Q5SZB4 431 aa8.81□□□□□ -1
VTI1A-207ENST00000489357 RNASEH2BQ5TBB1 312 aaKnown RBP8.81□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms