RNA–Protein interactions for RNA: ENST00000489215.5

PTPN18-213, Transcript of protein tyrosine phosphatase, non-receptor type 18, humanhuman

TSL 4

Gene PTPN18, Length 460 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN18-213ENST00000489215 PMF1Q6P1K2 205 aa25.15■■□□□ 1.62
PTPN18-213ENST00000489215 ZNF606Q8WXB4 792 aa25.15■■□□□ 1.62
PTPN18-213ENST00000489215 SHC3Q92529 594 aa25.15■■□□□ 1.62
PTPN18-213ENST00000489215 XPO6Q96QU8 1125 aaKnown RBP25.15■■□□□ 1.62
PTPN18-213ENST00000489215 TRIM62Q9BVG3 475 aa25.15■■□□□ 1.62
PTPN18-213ENST00000489215 CCDC163A0A0D9SF12 145 aa25.14■■□□□ 1.62
PTPN18-213ENST00000489215 PES1O00541 588 aaKnown RBP25.14■■□□□ 1.62
PTPN18-213ENST00000489215 SCAMP3O14828 347 aaKnown RBP25.14■■□□□ 1.62
PTPN18-213ENST00000489215 GREM1O60565 184 aa25.14■■□□□ 1.62
PTPN18-213ENST00000489215 STC2O76061 302 aa25.14■■□□□ 1.62
PTPN18-213ENST00000489215 LETM1O95202 739 aaPredicted RBP25.14■■□□□ 1.62
PTPN18-213ENST00000489215 USP8P40818 1118 aa25.14■■□□□ 1.62
PTPN18-213ENST00000489215 GRIA2P42262 883 aa25.14■■□□□ 1.62
PTPN18-213ENST00000489215 DAOAP59103 153 aa25.14■■□□□ 1.62
PTPN18-213ENST00000489215 MRPS21P82921 87 aaKnown RBP25.14■■□□□ 1.62
PTPN18-213ENST00000489215 PTK2Q05397 1052 aa25.14■■□□□ 1.62
PTPN18-213ENST00000489215 STX1AQ16623 288 aa25.14■■□□□ 1.62
PTPN18-213ENST00000489215 GAB4Q2WGN9 574 aa25.14■■□□□ 1.62
PTPN18-213ENST00000489215 HSF5Q4G112 596 aaPredicted RBP25.14■■□□□ 1.62
PTPN18-213ENST00000489215 MIIPQ5JXC2 388 aa25.14■■□□□ 1.62
PTPN18-213ENST00000489215 SYT13Q7L8C5 426 aa25.14■■□□□ 1.62
PTPN18-213ENST00000489215 ASCL5Q7RTU5 278 aa25.14■■□□□ 1.62
PTPN18-213ENST00000489215 LONP2Q86WA8 852 aa25.14■■□□□ 1.62
PTPN18-213ENST00000489215 ANKRD20A12PQ8NF67 263 aa25.14■■□□□ 1.62
PTPN18-213ENST00000489215 PLD4Q96BZ4 506 aa25.14■■□□□ 1.62
PTPN18-213ENST00000489215 ZSWIM1Q9BR11 485 aa25.14■■□□□ 1.62
PTPN18-213ENST00000489215 SAMSN1Q9NSI8 373 aaKnown RBP25.14■■□□□ 1.62
PTPN18-213ENST00000489215 DEC1Q9P2X7 70 aa25.14■■□□□ 1.62
PTPN18-213ENST00000489215 MYOFQ9NZM1 2061 aa25.13■■□□□ 1.61
PTPN18-213ENST00000489215 MDM4O15151 490 aa25.13■■□□□ 1.61
PTPN18-213ENST00000489215 THAP12O43422 761 aa25.13■■□□□ 1.61
PTPN18-213ENST00000489215 GPD2P43304 727 aa25.13■■□□□ 1.61
PTPN18-213ENST00000489215 TNFRSF4P43489 277 aa25.13■■□□□ 1.61
PTPN18-213ENST00000489215 BPIFB4P59827 614 aa25.13■■□□□ 1.61
PTPN18-213ENST00000489215 Q6ZNB5 142 aa25.13■■□□□ 1.61
PTPN18-213ENST00000489215 RPLP0P6Q8NHW5 317 aa25.13■■□□□ 1.61
PTPN18-213ENST00000489215 KCNV2Q8TDN2 545 aa25.13■■□□□ 1.61
PTPN18-213ENST00000489215 ARHGEF4Q9NR80 690 aa25.13■■□□□ 1.61
PTPN18-213ENST00000489215 MARK1Q9P0L2 795 aa25.13■■□□□ 1.61
PTPN18-213ENST00000489215 DNAJC12Q9UKB3 198 aa25.13■■□□□ 1.61
PTPN18-213ENST00000489215 HBS1LQ9Y450 684 aaKnown RBP25.13■■□□□ 1.61
PTPN18-213ENST00000489215 YJEFN3A6XGL0 299 aa25.12■■□□□ 1.61
PTPN18-213ENST00000489215 E7ENQ6 273 aa25.12■■□□□ 1.61
PTPN18-213ENST00000489215 K7ESF4 209 aa25.12■■□□□ 1.61
PTPN18-213ENST00000489215 KAT7O95251 611 aa25.12■■□□□ 1.61
PTPN18-213ENST00000489215 RPL34P49207 117 aaKnown RBP25.12■■□□□ 1.61
PTPN18-213ENST00000489215 RGS7P49802 495 aa25.12■■□□□ 1.61
PTPN18-213ENST00000489215 SNX16P57768 344 aa25.12■■□□□ 1.61
PTPN18-213ENST00000489215 BHLHA9Q7RTU4 235 aa25.12■■□□□ 1.61
PTPN18-213ENST00000489215 TMEM25Q86YD3 366 aa25.12■■□□□ 1.61
PTPN18-213ENST00000489215 WBP2Q969T9 261 aa25.12■■□□□ 1.61
PTPN18-213ENST00000489215 BBS2Q9BXC9 721 aa25.12■■□□□ 1.61
PTPN18-213ENST00000489215 SLC12A8A0AV02 714 aa25.11■■□□□ 1.61
PTPN18-213ENST00000489215 K7EQS6 105 aa25.11■■□□□ 1.61
PTPN18-213ENST00000489215 HARS2P49590 506 aaKnown RBP25.11■■□□□ 1.61
PTPN18-213ENST00000489215 HSP90AA4PQ58FG1 418 aa25.11■■□□□ 1.61
PTPN18-213ENST00000489215 NAIF1Q69YI7 327 aaPredicted RBP25.11■■□□□ 1.61
PTPN18-213ENST00000489215 GJB7Q6PEY0 223 aa25.11■■□□□ 1.61
PTPN18-213ENST00000489215 ETFBKMTQ8IXQ9 262 aa25.11■■□□□ 1.61
PTPN18-213ENST00000489215 EPC1Q9H2F5 836 aa25.11■■□□□ 1.61
PTPN18-213ENST00000489215 ST7Q9NRC1 585 aa25.11■■□□□ 1.61
PTPN18-213ENST00000489215 RAB23Q9ULC3 237 aa25.11■■□□□ 1.61
PTPN18-213ENST00000489215 ATG2BQ96BY7 2078 aa25.11■■□□□ 1.61
PTPN18-213ENST00000489215 LTFP02788 710 aa25.1■■□□□ 1.61
PTPN18-213ENST00000489215 CYBBP04839 570 aa25.1■■□□□ 1.61
PTPN18-213ENST00000489215 CORO1AP31146 461 aaKnown RBP25.1■■□□□ 1.61
PTPN18-213ENST00000489215 SLC6A11P48066 632 aa25.1■■□□□ 1.61
PTPN18-213ENST00000489215 ZNF445P59923 1031 aa25.1■■□□□ 1.61
PTPN18-213ENST00000489215 USP33Q8TEY7 942 aa25.1■■□□□ 1.61
PTPN18-213ENST00000489215 EZH1Q92800 747 aaPredicted RBP25.1■■□□□ 1.61
PTPN18-213ENST00000489215 NOX5Q96PH1 765 aa25.1■■□□□ 1.61
PTPN18-213ENST00000489215 NAT10Q9H0A0 1025 aaKnown RBP25.1■■□□□ 1.61
PTPN18-213ENST00000489215 SIX2Q9NPC8 291 aa25.1■■□□□ 1.61
PTPN18-213ENST00000489215 ZFHX2Q9C0A1 2572 aaPredicted RBP25.09■■□□□ 1.61
PTPN18-213ENST00000489215 TBC1D3BA6NDS4 549 aa25.09■■□□□ 1.61
PTPN18-213ENST00000489215 BECN2A8MW95 431 aa25.09■■□□□ 1.61
PTPN18-213ENST00000489215 NEDD8-MDP1E9PL57 170 aa25.09■■□□□ 1.61
PTPN18-213ENST00000489215 CACNG3O60359 315 aa25.09■■□□□ 1.61
PTPN18-213ENST00000489215 TULP3O75386 442 aa25.09■■□□□ 1.61
PTPN18-213ENST00000489215 LATS1O95835 1130 aa25.09■■□□□ 1.61
PTPN18-213ENST00000489215 TYRP14679 529 aa25.09■■□□□ 1.61
PTPN18-213ENST00000489215 MYL5Q02045 173 aa25.09■■□□□ 1.61
PTPN18-213ENST00000489215 TRIP4Q15650 581 aaPredicted RBP25.09■■□□□ 1.61
PTPN18-213ENST00000489215 FKBP15Q5T1M5 1219 aa25.09■■□□□ 1.61
PTPN18-213ENST00000489215 CDKAL1Q5VV42 579 aa25.09■■□□□ 1.61
PTPN18-213ENST00000489215 MSANTD2Q6P1R3 559 aa25.09■■□□□ 1.61
PTPN18-213ENST00000489215 TPGS1Q6ZTW0 290 aa25.09■■□□□ 1.61
PTPN18-213ENST00000489215 BEND5Q7L4P6 421 aa25.09■■□□□ 1.61
PTPN18-213ENST00000489215 TRMT11Q7Z4G4 463 aaKnown RBP25.09■■□□□ 1.61
PTPN18-213ENST00000489215 WDR5BQ86VZ2 330 aa25.09■■□□□ 1.61
PTPN18-213ENST00000489215 FMNL3Q8IVF7 1028 aa25.09■■□□□ 1.61
PTPN18-213ENST00000489215 CPXM2Q8N436 756 aa25.09■■□□□ 1.61
PTPN18-213ENST00000489215 NDRG1Q92597 394 aaKnown RBP25.09■■□□□ 1.61
PTPN18-213ENST00000489215 SLC4A5Q9BY07 1137 aa25.09■■□□□ 1.61
PTPN18-213ENST00000489215 PCDHGC3Q9UN70 934 aa25.09■■□□□ 1.61
PTPN18-213ENST00000489215 DAAM1Q9Y4D1 1078 aa25.09■■□□□ 1.61
PTPN18-213ENST00000489215 CEP83Q9Y592 693 aa25.09■■□□□ 1.61
PTPN18-213ENST00000489215 HMBSP08397 361 aa25.08■■□□□ 1.61
PTPN18-213ENST00000489215 KRT9P35527 623 aa25.08■■□□□ 1.61
PTPN18-213ENST00000489215 DMC1Q14565 340 aa25.08■■□□□ 1.61
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms