RNA–Protein interactions for RNA: ENST00000489037.1

BRCA1-218, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 4

Gene BRCA1, Length 455 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-218ENST00000489037 BSPRYQ5W0U4 402 aa14.96□□□□□ -0.01
BRCA1-218ENST00000489037 RHBDF2Q6PJF5 856 aa14.96□□□□□ -0.01
BRCA1-218ENST00000489037 STK32AQ8WU08 396 aa14.96□□□□□ -0.01
BRCA1-218ENST00000489037 ATRIPQ8WXE1 791 aa14.96□□□□□ -0.01
BRCA1-218ENST00000489037 NDRG1Q92597 394 aaKnown RBP14.96□□□□□ -0.01
BRCA1-218ENST00000489037 PCMTD1Q96MG8 357 aaPredicted RBP14.96□□□□□ -0.01
BRCA1-218ENST00000489037 NOX5Q96PH1 765 aa14.96□□□□□ -0.01
BRCA1-218ENST00000489037 ZSWIM1Q9BR11 485 aa14.96□□□□□ -0.01
BRCA1-218ENST00000489037 FAM126AQ9BYI3 521 aaPredicted RBP14.96□□□□□ -0.01
BRCA1-218ENST00000489037 MIS12Q9H081 205 aa14.96□□□□□ -0.01
BRCA1-218ENST00000489037 PDCL3Q9H2J4 239 aa14.96□□□□□ -0.01
BRCA1-218ENST00000489037 SEMA4AQ9H3S1 761 aa14.96□□□□□ -0.01
BRCA1-218ENST00000489037 SIX2Q9NPC8 291 aa14.96□□□□□ -0.01
BRCA1-218ENST00000489037 SPHK2Q9NRA0 654 aa14.96□□□□□ -0.01
BRCA1-218ENST00000489037 CEP83Q9Y592 693 aa14.96□□□□□ -0.01
BRCA1-218ENST00000489037 YJEFN3A6XGL0 299 aa14.95□□□□□ -0.02
BRCA1-218ENST00000489037 BECN2A8MW95 431 aa14.95□□□□□ -0.02
BRCA1-218ENST00000489037 E7ENQ6 273 aa14.95□□□□□ -0.02
BRCA1-218ENST00000489037 FOXN3O00409 490 aaPredicted RBP14.95□□□□□ -0.02
BRCA1-218ENST00000489037 STC2O76061 302 aa14.95□□□□□ -0.02
BRCA1-218ENST00000489037 APODP05090 189 aa14.95□□□□□ -0.02
BRCA1-218ENST00000489037 EIF2DP41214 584 aaKnown RBP14.95□□□□□ -0.02
BRCA1-218ENST00000489037 GPD2P43304 727 aa14.95□□□□□ -0.02
BRCA1-218ENST00000489037 KCNMA1Q12791 1236 aa14.95□□□□□ -0.02
BRCA1-218ENST00000489037 DRAP1Q14919 205 aaPredicted RBP14.95□□□□□ -0.02
BRCA1-218ENST00000489037 KLHDC7AQ5VTJ3 777 aa14.95□□□□□ -0.02
BRCA1-218ENST00000489037 DENND1BQ6P3S1 775 aa14.95□□□□□ -0.02
BRCA1-218ENST00000489037 Q6ZS52 159 aa14.95□□□□□ -0.02
BRCA1-218ENST00000489037 ALYREFQ86V81 257 aaKnown RBP14.95□□□□□ -0.02
BRCA1-218ENST00000489037 MAML2Q8IZL2 1156 aaPredicted RBP14.95□□□□□ -0.02
BRCA1-218ENST00000489037 NKD2Q969F2 451 aaPredicted RBP14.95□□□□□ -0.02
BRCA1-218ENST00000489037 XPO6Q96QU8 1125 aaKnown RBP14.95□□□□□ -0.02
BRCA1-218ENST00000489037 PNKPQ96T60 521 aa14.95□□□□□ -0.02
BRCA1-218ENST00000489037 TRIM62Q9BVG3 475 aa14.95□□□□□ -0.02
BRCA1-218ENST00000489037 PRMT8Q9NR22 394 aaPredicted RBP14.95□□□□□ -0.02
BRCA1-218ENST00000489037 WDR35Q9P2L0 1181 aa14.95□□□□□ -0.02
BRCA1-218ENST00000489037 WDFY4Q6ZS81 3184 aa14.95□□□□□ -0.02
BRCA1-218ENST00000489037 PIEZO1Q92508 2521 aa14.95□□□□□ -0.02
BRCA1-218ENST00000489037 PROB1E7EW31 1015 aa14.94□□□□□ -0.02
BRCA1-218ENST00000489037 HOXC11O43248 304 aaPredicted RBP14.94□□□□□ -0.02
BRCA1-218ENST00000489037 RNF40O75150 1001 aa14.94□□□□□ -0.02
BRCA1-218ENST00000489037 LTFP02788 710 aa14.94□□□□□ -0.02
BRCA1-218ENST00000489037 CORO1AP31146 461 aaKnown RBP14.94□□□□□ -0.02
BRCA1-218ENST00000489037 CHKAP35790 457 aa14.94□□□□□ -0.02
BRCA1-218ENST00000489037 OPRD1P41143 372 aa14.94□□□□□ -0.02
BRCA1-218ENST00000489037 HARS2P49590 506 aaKnown RBP14.94□□□□□ -0.02
BRCA1-218ENST00000489037 MRE11P49959 708 aa14.94□□□□□ -0.02
BRCA1-218ENST00000489037 COPB1P53618 953 aaKnown RBP14.94□□□□□ -0.02
BRCA1-218ENST00000489037 KLHL40Q2TBA0 621 aa14.94□□□□□ -0.02
BRCA1-218ENST00000489037 ANO6Q4KMQ2 910 aa14.94□□□□□ -0.02
BRCA1-218ENST00000489037 FMNL3Q8IVF7 1028 aa14.94□□□□□ -0.02
BRCA1-218ENST00000489037 AOPEPQ8N6M6 819 aa14.94□□□□□ -0.02
BRCA1-218ENST00000489037 EDEM1Q92611 657 aa14.94□□□□□ -0.02
BRCA1-218ENST00000489037 WBP2Q969T9 261 aa14.94□□□□□ -0.02
BRCA1-218ENST00000489037 ACDQ96AP0 544 aa14.94□□□□□ -0.02
BRCA1-218ENST00000489037 FAM149B1Q96BN6 582 aa14.94□□□□□ -0.02
BRCA1-218ENST00000489037 PLD4Q96BZ4 506 aa14.94□□□□□ -0.02
BRCA1-218ENST00000489037 PHOX2BQ99453 314 aa14.94□□□□□ -0.02
BRCA1-218ENST00000489037 BBS2Q9BXC9 721 aa14.94□□□□□ -0.02
BRCA1-218ENST00000489037 FBRSL1Q9HCM7 1045 aaKnown RBP14.94□□□□□ -0.02
BRCA1-218ENST00000489037 PLCB1Q9NQ66 1216 aa14.94□□□□□ -0.02
BRCA1-218ENST00000489037 ARHGEF4Q9NR80 690 aa14.94□□□□□ -0.02
BRCA1-218ENST00000489037 ZSCAN32Q9NX65 697 aa14.94□□□□□ -0.02
BRCA1-218ENST00000489037 DEC1Q9P2X7 70 aa14.94□□□□□ -0.02
BRCA1-218ENST00000489037 LIMA1Q9UHB6 759 aaKnown RBP14.94□□□□□ -0.02
BRCA1-218ENST00000489037 SLC8A2Q9UPR5 921 aa14.94□□□□□ -0.02
BRCA1-218ENST00000489037 HBS1LQ9Y450 684 aaKnown RBP14.94□□□□□ -0.02
BRCA1-218ENST00000489037 DAAM1Q9Y4D1 1078 aa14.94□□□□□ -0.02
BRCA1-218ENST00000489037 PCDHGA2Q9Y5H1 932 aa14.94□□□□□ -0.02
BRCA1-218ENST00000489037 CAPN9O14815 690 aa14.93□□□□□ -0.02
BRCA1-218ENST00000489037 CYBBP04839 570 aa14.93□□□□□ -0.02
BRCA1-218ENST00000489037 UCHL3P15374 230 aa14.93□□□□□ -0.02
BRCA1-218ENST00000489037 SLC6A11P48066 632 aa14.93□□□□□ -0.02
BRCA1-218ENST00000489037 SATB1Q01826 763 aa14.93□□□□□ -0.02
BRCA1-218ENST00000489037 GAS6Q14393 721 aa14.93□□□□□ -0.02
BRCA1-218ENST00000489037 NAIF1Q69YI7 327 aaPredicted RBP14.93□□□□□ -0.02
BRCA1-218ENST00000489037 TSSK4Q6SA08 328 aa14.93□□□□□ -0.02
BRCA1-218ENST00000489037 TPGS1Q6ZTW0 290 aa14.93□□□□□ -0.02
BRCA1-218ENST00000489037 BHLHA9Q7RTU4 235 aa14.93□□□□□ -0.02
BRCA1-218ENST00000489037 TMEM25Q86YD3 366 aa14.93□□□□□ -0.02
BRCA1-218ENST00000489037 SCUBE3Q8IX30 993 aa14.93□□□□□ -0.02
BRCA1-218ENST00000489037 FAM71AQ8IYT1 594 aa14.93□□□□□ -0.02
BRCA1-218ENST00000489037 NAT16Q8N8M0 369 aa14.93□□□□□ -0.02
BRCA1-218ENST00000489037 BPIFA3Q9BQP9 254 aa14.93□□□□□ -0.02
BRCA1-218ENST00000489037 SLC4A5Q9BY07 1137 aa14.93□□□□□ -0.02
BRCA1-218ENST00000489037 STK33Q9BYT3 514 aa14.93□□□□□ -0.02
BRCA1-218ENST00000489037 ACP6Q9NPH0 428 aa14.93□□□□□ -0.02
BRCA1-218ENST00000489037 SFMBT1Q9UHJ3 866 aa14.93□□□□□ -0.02
BRCA1-218ENST00000489037 PCDHGC3Q9UN70 934 aa14.93□□□□□ -0.02
BRCA1-218ENST00000489037 FHOD1Q9Y613 1164 aa14.93□□□□□ -0.02
BRCA1-218ENST00000489037 R4GN57 208 aa14.93□□□□□ -0.02
BRCA1-218ENST00000489037 TBC1D3BA6NDS4 549 aa14.92□□□□□ -0.02
BRCA1-218ENST00000489037 CHURC1-FNTBB4DL54 471 aa14.92□□□□□ -0.02
BRCA1-218ENST00000489037 NEDD8-MDP1E9PL57 170 aa14.92□□□□□ -0.02
BRCA1-218ENST00000489037 KAT7O95251 611 aa14.92□□□□□ -0.02
BRCA1-218ENST00000489037 PAPSS2O95340 614 aaPredicted RBP14.92□□□□□ -0.02
BRCA1-218ENST00000489037 NCAM1P13591 858 aa14.92□□□□□ -0.02
BRCA1-218ENST00000489037 CLCN1P35523 988 aa14.92□□□□□ -0.02
BRCA1-218ENST00000489037 GRIA2P42262 883 aa14.92□□□□□ -0.02
BRCA1-218ENST00000489037 RPL34P49207 117 aaKnown RBP14.92□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms