RNA–Protein interactions for RNA: ENST00000488596.5

CD46-215, Transcript of CD46 molecule, humanhuman

TSL 3

Gene CD46, Length 872 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD46-215ENST00000488596 NHLRC4P0CG21 123 aaPredicted RBP3.81□□□□□ -1.8
CD46-215ENST00000488596 SRGAP2BP0DMP2 458 aa3.81□□□□□ -1.8
CD46-215ENST00000488596 ARP10275 920 aa3.81□□□□□ -1.8
CD46-215ENST00000488596 IDEP14735 1019 aa3.81□□□□□ -1.8
CD46-215ENST00000488596 EGR1P18146 543 aa3.81□□□□□ -1.8
CD46-215ENST00000488596 DRD4P21917 467 aa3.81□□□□□ -1.8
CD46-215ENST00000488596 EPHA3P29320 983 aa3.81□□□□□ -1.8
CD46-215ENST00000488596 MPGP29372 298 aa3.81□□□□□ -1.8
CD46-215ENST00000488596 PTGER1P34995 402 aa3.81□□□□□ -1.8
CD46-215ENST00000488596 HALP42357 657 aa3.81□□□□□ -1.8
CD46-215ENST00000488596 PDE1AP54750 535 aa3.81□□□□□ -1.8
CD46-215ENST00000488596 TIRAPP58753 221 aa3.81□□□□□ -1.8
CD46-215ENST00000488596 SPARCL1Q14515 664 aa3.81□□□□□ -1.8
CD46-215ENST00000488596 DHX8Q14562 1220 aaKnown RBP3.81□□□□□ -1.8
CD46-215ENST00000488596 MAPKAPK3Q16644 382 aa3.81□□□□□ -1.8
CD46-215ENST00000488596 GORABQ5T7V8 394 aa3.81□□□□□ -1.8
CD46-215ENST00000488596 ANO1Q5XXA6 986 aa3.81□□□□□ -1.8
CD46-215ENST00000488596 SUMO4Q6EEV6 95 aa3.81□□□□□ -1.8
CD46-215ENST00000488596 DPY19L3Q6ZPD9 716 aa3.81□□□□□ -1.8
CD46-215ENST00000488596 MYCT1Q8N699 235 aa3.81□□□□□ -1.8
CD46-215ENST00000488596 METTL25Q8N6Q8 603 aa3.81□□□□□ -1.8
CD46-215ENST00000488596 PBKQ96KB5 322 aa3.81□□□□□ -1.8
CD46-215ENST00000488596 EHD3Q9NZN3 535 aa3.81□□□□□ -1.8
CD46-215ENST00000488596 TMOD4Q9NZQ9 345 aa3.81□□□□□ -1.8
CD46-215ENST00000488596 LRFN1Q9P244 771 aa3.81□□□□□ -1.8
CD46-215ENST00000488596 VPS51Q9UID3 782 aa3.81□□□□□ -1.8
CD46-215ENST00000488596 CCNL1Q9UK58 526 aaPredicted RBP3.81□□□□□ -1.8
CD46-215ENST00000488596 DRG1Q9Y295 367 aaKnown RBP3.81□□□□□ -1.8
CD46-215ENST00000488596 SLC27A6Q9Y2P4 619 aa3.81□□□□□ -1.8
CD46-215ENST00000488596 ZNF521Q96K83 1311 aa3.8□□□□□ -1.8
CD46-215ENST00000488596 AP4M1O00189 453 aa3.8□□□□□ -1.8
CD46-215ENST00000488596 EXOC5O00471 708 aa3.8□□□□□ -1.8
CD46-215ENST00000488596 ZSCAN9O15535 394 aaPredicted RBP3.8□□□□□ -1.8
CD46-215ENST00000488596 CCNT2O60583 730 aaKnown RBP3.8□□□□□ -1.8
CD46-215ENST00000488596 SNX2O60749 519 aa3.8□□□□□ -1.8
CD46-215ENST00000488596 MOSPD3O75425 235 aa3.8□□□□□ -1.8
CD46-215ENST00000488596 SKAP2O75563 359 aaPredicted RBP3.8□□□□□ -1.8
CD46-215ENST00000488596 EIF3JO75822 258 aaKnown RBP3.8□□□□□ -1.8
CD46-215ENST00000488596 BMP15O95972 392 aa3.8□□□□□ -1.8
CD46-215ENST00000488596 CSTBP04080 98 aaKnown RBP3.8□□□□□ -1.8
CD46-215ENST00000488596 JUPP14923 745 aa3.8□□□□□ -1.8
CD46-215ENST00000488596 ZFXP17010 805 aaPredicted RBP3.8□□□□□ -1.8
CD46-215ENST00000488596 MST1P26927 711 aa3.8□□□□□ -1.8
CD46-215ENST00000488596 EPHB2P29323 1055 aa3.8□□□□□ -1.8
CD46-215ENST00000488596 CCT8P50990 548 aa3.8□□□□□ -1.8
CD46-215ENST00000488596 TUBA4AP68366 448 aa3.8□□□□□ -1.8
CD46-215ENST00000488596 GPS1Q13098 491 aa3.8□□□□□ -1.8
CD46-215ENST00000488596 BMPR2Q13873 1038 aa3.8□□□□□ -1.8
CD46-215ENST00000488596 KRT72Q14CN4 511 aa3.8□□□□□ -1.8
CD46-215ENST00000488596 ZACNQ401N2 412 aa3.8□□□□□ -1.8
CD46-215ENST00000488596 ABLIM2Q6H8Q1 611 aa3.8□□□□□ -1.8
CD46-215ENST00000488596 MRNIPQ6NTE8 343 aa3.8□□□□□ -1.8
CD46-215ENST00000488596 USP17L6PQ6QN14 398 aa3.8□□□□□ -1.8
CD46-215ENST00000488596 YTHDF3Q7Z739 585 aaKnown RBP3.8□□□□□ -1.8
CD46-215ENST00000488596 NEK8Q86SG6 692 aa3.8□□□□□ -1.8
CD46-215ENST00000488596 CERS3Q8IU89 383 aa3.8□□□□□ -1.8
CD46-215ENST00000488596 WASF1Q92558 559 aa3.8□□□□□ -1.8
CD46-215ENST00000488596 GRAMD1AQ96CP6 724 aa3.8□□□□□ -1.8
CD46-215ENST00000488596 PRPF18Q99633 342 aaKnown RBP3.8□□□□□ -1.8
CD46-215ENST00000488596 SH2D3AQ9BRG2 576 aa3.8□□□□□ -1.8
CD46-215ENST00000488596 DPCDQ9BVM2 203 aaPredicted RBP3.8□□□□□ -1.8
CD46-215ENST00000488596 SORBS1Q9BX66 1292 aaKnown RBP3.8□□□□□ -1.8
CD46-215ENST00000488596 VN1R3Q9BXE9 311 aa3.8□□□□□ -1.8
CD46-215ENST00000488596 QTRT1Q9BXR0 403 aaKnown RBP3.8□□□□□ -1.8
CD46-215ENST00000488596 NECTIN3Q9NQS3 549 aa3.8□□□□□ -1.8
CD46-215ENST00000488596 GRHPRQ9UBQ7 328 aa3.8□□□□□ -1.8
CD46-215ENST00000488596 LPAR3Q9UBY5 353 aa3.8□□□□□ -1.8
CD46-215ENST00000488596 MORC2Q9Y6X9 1032 aaPredicted RBP3.8□□□□□ -1.8
CD46-215ENST00000488596 TRIM38O00635 465 aa3.79□□□□□ -1.8
CD46-215ENST00000488596 ASNA1O43681 348 aa3.79□□□□□ -1.8
CD46-215ENST00000488596 EBLN1P0CF75 366 aa3.79□□□□□ -1.8
CD46-215ENST00000488596 GYS1P13807 737 aa3.79□□□□□ -1.8
CD46-215ENST00000488596 PCSK6P29122 969 aa3.79□□□□□ -1.8
CD46-215ENST00000488596 MTHFSP49914 203 aa3.79□□□□□ -1.8
CD46-215ENST00000488596 TIAL1Q01085 375 aaKnown RBP eCLIP3.79□□□□□ -1.88e-20■■■■□ 21.1
CD46-215ENST00000488596 BLMHQ13867 455 aa3.79□□□□□ -1.8
CD46-215ENST00000488596 PTK2BQ14289 1009 aa3.79□□□□□ -1.8
CD46-215ENST00000488596 SLC5A9Q2M3M2 681 aa3.79□□□□□ -1.8
CD46-215ENST00000488596 PROSER3Q2NL68 480 aa3.79□□□□□ -1.8
CD46-215ENST00000488596 INO80DQ53TQ3 878 aaPredicted RBP3.79□□□□□ -1.8
CD46-215ENST00000488596 CEP78Q5JTW2 689 aa3.79□□□□□ -1.8
CD46-215ENST00000488596 ZNF618Q5T7W0 954 aa3.79□□□□□ -1.8
CD46-215ENST00000488596 MZT2AQ6P582 158 aa3.79□□□□□ -1.8
CD46-215ENST00000488596 FSTL5Q8N475 847 aaPredicted RBP3.79□□□□□ -1.8
CD46-215ENST00000488596 LRRC71Q8N4P6 559 aa3.79□□□□□ -1.8
CD46-215ENST00000488596 ANKRD42Q8N9B4 389 aa3.79□□□□□ -1.8
CD46-215ENST00000488596 OR1N1Q8NGS0 311 aa3.79□□□□□ -1.8
CD46-215ENST00000488596 SUN3Q8TAQ9 357 aa3.79□□□□□ -1.8
CD46-215ENST00000488596 ABHD5Q8WTS1 349 aa3.79□□□□□ -1.8
CD46-215ENST00000488596 SOCS4Q8WXH5 440 aa3.79□□□□□ -1.8
CD46-215ENST00000488596 CCT6BQ92526 530 aa3.79□□□□□ -1.8
CD46-215ENST00000488596 REPS1Q96D71 796 aa3.79□□□□□ -1.8
CD46-215ENST00000488596 ALG8Q9BVK2 526 aa3.79□□□□□ -1.8
CD46-215ENST00000488596 SEMA4CQ9C0C4 833 aa3.79□□□□□ -1.8
CD46-215ENST00000488596 ARHGEF3Q9NR81 526 aa3.79□□□□□ -1.8
CD46-215ENST00000488596 SERTAD4Q9NUC0 356 aa3.79□□□□□ -1.8
CD46-215ENST00000488596 DACT1Q9NYF0 836 aa3.79□□□□□ -1.8
CD46-215ENST00000488596 RIMKLBQ9ULI2 386 aa3.79□□□□□ -1.8
CD46-215ENST00000488596 DTNAQ9Y4J8 743 aa3.79□□□□□ -1.8
CD46-215ENST00000488596 PCDHGB3Q9Y5G1 929 aa3.79□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms