RNA–Protein interactions for RNA: ENST00000488522.1

TTC3-221, Transcript of tetratricopeptide repeat domain 3, humanhuman

TSL 5

Gene TTC3, Length 853 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC3-221ENST00000488522 GOLPH3LQ9H4A5 285 aa12.97□□□□□ -0.33
TTC3-221ENST00000488522 GMIPQ9P107 970 aa12.97□□□□□ -0.33
TTC3-221ENST00000488522 CHORDC1Q9UHD1 332 aaPredicted RBP12.97□□□□□ -0.33
TTC3-221ENST00000488522 NFE2L3Q9Y4A8 694 aa12.97□□□□□ -0.33
TTC3-221ENST00000488522 ACACAQ13085 2346 aa12.97□□□□□ -0.33
TTC3-221ENST00000488522 APC2O95996 2303 aa12.96□□□□□ -0.33
TTC3-221ENST00000488522 TRIM24O15164 1050 aa12.96□□□□□ -0.33
TTC3-221ENST00000488522 GADD45BO75293 160 aaPredicted RBP12.96□□□□□ -0.33
TTC3-221ENST00000488522 NDUFV2P19404 249 aa12.96□□□□□ -0.33
TTC3-221ENST00000488522 CYP2J2P51589 502 aa12.96□□□□□ -0.33
TTC3-221ENST00000488522 ATXN3P54252 364 aaPredicted RBP12.96□□□□□ -0.33
TTC3-221ENST00000488522 ASIC1P78348 528 aa12.96□□□□□ -0.33
TTC3-221ENST00000488522 ZNF699Q32M78 642 aa12.96□□□□□ -0.33
TTC3-221ENST00000488522 GRAMD4Q6IC98 578 aa12.96□□□□□ -0.33
TTC3-221ENST00000488522 KIAA1211LQ6NV74 962 aa12.96□□□□□ -0.33
TTC3-221ENST00000488522 KLHDC10Q6PID8 442 aa12.96□□□□□ -0.33
TTC3-221ENST00000488522 LRSAM1Q6UWE0 723 aa12.96□□□□□ -0.33
TTC3-221ENST00000488522 CEP57L1Q8IYX8 460 aa12.96□□□□□ -0.33
TTC3-221ENST00000488522 CRYBG2Q8N1P7 616 aa12.96□□□□□ -0.33
TTC3-221ENST00000488522 NAT16Q8N8M0 369 aa12.96□□□□□ -0.33
TTC3-221ENST00000488522 PARD3BQ8TEW8 1205 aa12.96□□□□□ -0.33
TTC3-221ENST00000488522 IPO4Q8TEX9 1081 aaKnown RBP12.96□□□□□ -0.33
TTC3-221ENST00000488522 SMOQ99835 787 aa12.96□□□□□ -0.33
TTC3-221ENST00000488522 FBXO44Q9H4M3 255 aa12.96□□□□□ -0.33
TTC3-221ENST00000488522 FAM124BQ9H5Z6 455 aaPredicted RBP12.96□□□□□ -0.33
TTC3-221ENST00000488522 WDR35Q9P2L0 1181 aa12.96□□□□□ -0.33
TTC3-221ENST00000488522 NXF1Q9UBU9 619 aaKnown RBP12.96□□□□□ -0.33
TTC3-221ENST00000488522 SUSD2Q9UGT4 822 aa12.96□□□□□ -0.33
TTC3-221ENST00000488522 USP25Q9UHP3 1055 aa12.96□□□□□ -0.33
TTC3-221ENST00000488522 FBXO10Q9UK96 956 aa12.96□□□□□ -0.33
TTC3-221ENST00000488522 SMG1Q96Q15 3661 aaKnown RBP12.95□□□□□ -0.34
TTC3-221ENST00000488522 PRRT4C9JH25 899 aa12.95□□□□□ -0.34
TTC3-221ENST00000488522 CLIC2O15247 247 aa12.95□□□□□ -0.34
TTC3-221ENST00000488522 AP1G2O75843 785 aa12.95□□□□□ -0.34
TTC3-221ENST00000488522 VNN1O95497 513 aa12.95□□□□□ -0.34
TTC3-221ENST00000488522 C4BPAP04003 597 aaKnown RBP12.95□□□□□ -0.34
TTC3-221ENST00000488522 SYPP08247 313 aa12.95□□□□□ -0.34
TTC3-221ENST00000488522 CISD3P0C7P0 127 aa12.95□□□□□ -0.34
TTC3-221ENST00000488522 HOXB3P14651 431 aaPredicted RBP12.95□□□□□ -0.34
TTC3-221ENST00000488522 TYRP14679 529 aa12.95□□□□□ -0.34
TTC3-221ENST00000488522 PGFP49763 221 aa12.95□□□□□ -0.34
TTC3-221ENST00000488522 ZNF132P52740 706 aa12.95□□□□□ -0.34
TTC3-221ENST00000488522 CDH8P55286 799 aa12.95□□□□□ -0.34
TTC3-221ENST00000488522 FAM193AP78312 1265 aa12.95□□□□□ -0.34
TTC3-221ENST00000488522 NCOA4Q13772 614 aa12.95□□□□□ -0.34
TTC3-221ENST00000488522 ENPP2Q13822 863 aa12.95□□□□□ -0.34
TTC3-221ENST00000488522 COL9A2Q14055 689 aaPredicted RBP12.95□□□□□ -0.34
TTC3-221ENST00000488522 ANO4Q32M45 955 aa12.95□□□□□ -0.34
TTC3-221ENST00000488522 ZNF667Q5HYK9 610 aa12.95□□□□□ -0.34
TTC3-221ENST00000488522 Q6ZNB5 142 aa12.95□□□□□ -0.34
TTC3-221ENST00000488522 UNC93AQ86WB7 457 aa12.95□□□□□ -0.34
TTC3-221ENST00000488522 PROSER1Q86XN7 944 aa12.95□□□□□ -0.34
TTC3-221ENST00000488522 SLC9A9Q8IVB4 645 aa12.95□□□□□ -0.34
TTC3-221ENST00000488522 ZNF276Q8N554 614 aa12.95□□□□□ -0.34
TTC3-221ENST00000488522 GOLGA5Q8TBA6 731 aa12.95□□□□□ -0.34
TTC3-221ENST00000488522 FOXJ1Q92949 421 aa12.95□□□□□ -0.34
TTC3-221ENST00000488522 MRGPRX1Q96LB2 322 aa12.95□□□□□ -0.34
TTC3-221ENST00000488522 HSPA12BQ96MM6 686 aa12.95□□□□□ -0.34
TTC3-221ENST00000488522 XPO6Q96QU8 1125 aaKnown RBP12.95□□□□□ -0.34
TTC3-221ENST00000488522 ACOX2Q99424 681 aa12.95□□□□□ -0.34
TTC3-221ENST00000488522 SDCBP2Q9H190 292 aa12.95□□□□□ -0.34
TTC3-221ENST00000488522 PNPLA8Q9NP80 782 aa12.95□□□□□ -0.34
TTC3-221ENST00000488522 FSCN3Q9NQT6 498 aa12.95□□□□□ -0.34
TTC3-221ENST00000488522 TLR8Q9NR97 1041 aaKnown RBP12.95□□□□□ -0.34
TTC3-221ENST00000488522 KRT82Q9NSB4 513 aa12.95□□□□□ -0.34
TTC3-221ENST00000488522 DNAJC17Q9NVM6 304 aaKnown RBP12.95□□□□□ -0.34
TTC3-221ENST00000488522 SCML2Q9UQR0 700 aa12.95□□□□□ -0.34
TTC3-221ENST00000488522 CKAP5Q14008 2032 aa12.95□□□□□ -0.34
TTC3-221ENST00000488522 MYH10P35580 1976 aa12.94□□□□□ -0.34
TTC3-221ENST00000488522 PVALEFA0A1B0GWK0 134 aa12.94□□□□□ -0.34
TTC3-221ENST00000488522 LRRIQ3A6PVS8 624 aaPredicted RBP12.94□□□□□ -0.34
TTC3-221ENST00000488522 HHLA1C9JL84 531 aa12.94□□□□□ -0.34
TTC3-221ENST00000488522 NEDD8-MDP1E9PL57 170 aa12.94□□□□□ -0.34
TTC3-221ENST00000488522 TAF4O00268 1085 aa12.94□□□□□ -0.34
TTC3-221ENST00000488522 NPC1O15118 1278 aa12.94□□□□□ -0.34
TTC3-221ENST00000488522 ACTN4O43707 911 aaKnown RBP12.94□□□□□ -0.34
TTC3-221ENST00000488522 BEST1O76090 585 aa12.94□□□□□ -0.34
TTC3-221ENST00000488522 SLFN14P0C7P3 912 aa12.94□□□□□ -0.34
TTC3-221ENST00000488522 C7P10643 843 aa12.94□□□□□ -0.34
TTC3-221ENST00000488522 RDXP35241 583 aaKnown RBP12.94□□□□□ -0.34
TTC3-221ENST00000488522 RING1Q06587 406 aa12.94□□□□□ -0.34
TTC3-221ENST00000488522 KNOP1Q1ED39 458 aaKnown RBP12.94□□□□□ -0.34
TTC3-221ENST00000488522 ZACNQ401N2 412 aa12.94□□□□□ -0.34
TTC3-221ENST00000488522 GLRX5Q86SX6 157 aa12.94□□□□□ -0.34
TTC3-221ENST00000488522 NELFCDQ8IXH7 590 aa12.94□□□□□ -0.34
TTC3-221ENST00000488522 CHPFQ8IZ52 775 aa12.94□□□□□ -0.34
TTC3-221ENST00000488522 FMR1NBQ8N0W7 255 aaPredicted RBP12.94□□□□□ -0.34
TTC3-221ENST00000488522 TRIML1Q8N9V2 468 aa12.94□□□□□ -0.34
TTC3-221ENST00000488522 ADAMTS14Q8WXS8 1223 aa12.94□□□□□ -0.34
TTC3-221ENST00000488522 DNASE2BQ8WZ79 361 aa12.94□□□□□ -0.34
TTC3-221ENST00000488522 TAF4BQ92750 862 aa12.94□□□□□ -0.34
TTC3-221ENST00000488522 CCDC34Q96HJ3 373 aa12.94□□□□□ -0.34
TTC3-221ENST00000488522 MED10Q9BTT4 135 aa12.94□□□□□ -0.34
TTC3-221ENST00000488522 GTPBP2Q9BX10 602 aaKnown RBP12.94□□□□□ -0.34
TTC3-221ENST00000488522 BBS2Q9BXC9 721 aa12.94□□□□□ -0.34
TTC3-221ENST00000488522 ZDHHC5Q9C0B5 715 aa12.94□□□□□ -0.34
TTC3-221ENST00000488522 UTP3Q9NQZ2 479 aaKnown RBP eCLIP12.94□□□□□ -0.343e-9■■■■■ 54.7
TTC3-221ENST00000488522 DMAC2Q9NW81 257 aa12.94□□□□□ -0.34
TTC3-221ENST00000488522 USP36Q9P275 1121 aaKnown RBP12.94□□□□□ -0.34
TTC3-221ENST00000488522 SERTAD1Q9UHV2 236 aa12.94□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms