RNA–Protein interactions for RNA: ENST00000488214.1

PDAP1-203, Transcript of PDGFA associated protein 1, humanhuman

TSL 3

Gene PDAP1, Length 274 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDAP1-203ENST00000488214 AFF4Q9UHB7 1163 aaKnown RBP7.21□□□□□ -1.26
PDAP1-203ENST00000488214 MAGED2Q9UNF1 606 aaPredicted RBP7.21□□□□□ -1.26
PDAP1-203ENST00000488214 AP4E1Q9UPM8 1137 aa7.21□□□□□ -1.26
PDAP1-203ENST00000488214 RWDD3Q9Y3V2 267 aa7.21□□□□□ -1.26
PDAP1-203ENST00000488214 NR2E1Q9Y466 385 aa7.21□□□□□ -1.26
PDAP1-203ENST00000488214 NR2E3Q9Y5X4 410 aa7.21□□□□□ -1.26
PDAP1-203ENST00000488214 USP3Q9Y6I4 520 aa7.21□□□□□ -1.26
PDAP1-203ENST00000488214 SLC38A8A6NNN8 435 aa7.2□□□□□ -1.26
PDAP1-203ENST00000488214 DYNC1I1O14576 645 aa7.2□□□□□ -1.26
PDAP1-203ENST00000488214 MDM4O15151 490 aa7.2□□□□□ -1.26
PDAP1-203ENST00000488214 TEX28O15482 410 aa7.2□□□□□ -1.26
PDAP1-203ENST00000488214 MSI1O43347 362 aaKnown RBP7.2□□□□□ -1.26
PDAP1-203ENST00000488214 RAD51CO43502 376 aa7.2□□□□□ -1.26
PDAP1-203ENST00000488214 ARHGEF15O94989 841 aa7.2□□□□□ -1.26
PDAP1-203ENST00000488214 SEC24AO95486 1093 aa7.2□□□□□ -1.26
PDAP1-203ENST00000488214 FYNP06241 537 aa7.2□□□□□ -1.26
PDAP1-203ENST00000488214 CA3P07451 260 aa7.2□□□□□ -1.26
PDAP1-203ENST00000488214 CD48P09326 243 aa7.2□□□□□ -1.26
PDAP1-203ENST00000488214 CTSAP10619 480 aa7.2□□□□□ -1.26
PDAP1-203ENST00000488214 YWHAQP27348 245 aa7.2□□□□□ -1.26
PDAP1-203ENST00000488214 PTPN7P35236 360 aa7.2□□□□□ -1.26
PDAP1-203ENST00000488214 BMPR1AP36894 532 aa7.2□□□□□ -1.26
PDAP1-203ENST00000488214 COPS2P61201 443 aa7.2□□□□□ -1.26
PDAP1-203ENST00000488214 DR1Q01658 176 aa7.2□□□□□ -1.26
PDAP1-203ENST00000488214 MMRN1Q13201 1228 aa7.2□□□□□ -1.26
PDAP1-203ENST00000488214 PLD1Q13393 1074 aa7.2□□□□□ -1.26
PDAP1-203ENST00000488214 DPYSL3Q14195 570 aa7.2□□□□□ -1.26
PDAP1-203ENST00000488214 VEPH1Q14D04 833 aa7.2□□□□□ -1.26
PDAP1-203ENST00000488214 SIX1Q15475 284 aaPredicted RBP7.2□□□□□ -1.26
PDAP1-203ENST00000488214 TAF12Q16514 161 aa7.2□□□□□ -1.26
PDAP1-203ENST00000488214 CA9Q16790 459 aa7.2□□□□□ -1.26
PDAP1-203ENST00000488214 EFHC2Q5JST6 749 aa7.2□□□□□ -1.26
PDAP1-203ENST00000488214 RASIP1Q5U651 963 aa7.2□□□□□ -1.26
PDAP1-203ENST00000488214 TPGS2Q68CL5 300 aa7.2□□□□□ -1.26
PDAP1-203ENST00000488214 SND1Q7KZF4 910 aaKnown RBP eCLIP7.2□□□□□ -1.26
PDAP1-203ENST00000488214 TMC7Q7Z402 723 aa7.2□□□□□ -1.26
PDAP1-203ENST00000488214 SPRED2Q7Z698 418 aa7.2□□□□□ -1.26
PDAP1-203ENST00000488214 SCD5Q86SK9 330 aa7.2□□□□□ -1.26
PDAP1-203ENST00000488214 ARHGAP18Q8N392 663 aa7.2□□□□□ -1.26
PDAP1-203ENST00000488214 GPR161Q8N6U8 529 aaKnown RBP7.2□□□□□ -1.26
PDAP1-203ENST00000488214 PRELID2Q8N945 189 aa7.2□□□□□ -1.26
PDAP1-203ENST00000488214 RNF139Q8WU17 664 aa7.2□□□□□ -1.26
PDAP1-203ENST00000488214 MAIP1Q8WWC4 291 aa7.2□□□□□ -1.26
PDAP1-203ENST00000488214 C1orf54Q8WWF1 131 aa7.2□□□□□ -1.26
PDAP1-203ENST00000488214 CENPIQ92674 756 aaPredicted RBP7.2□□□□□ -1.26
PDAP1-203ENST00000488214 RNF34Q969K3 372 aa7.2□□□□□ -1.26
PDAP1-203ENST00000488214 MAGOHBQ96A72 148 aaKnown RBP7.2□□□□□ -1.26
PDAP1-203ENST00000488214 SPATA17Q96L03 361 aa7.2□□□□□ -1.26
PDAP1-203ENST00000488214 CCDC114Q96M63 670 aa7.2□□□□□ -1.26
PDAP1-203ENST00000488214 KCTD15Q96SI1 283 aaPredicted RBP7.2□□□□□ -1.26
PDAP1-203ENST00000488214 PNKPQ96T60 521 aa7.2□□□□□ -1.26
PDAP1-203ENST00000488214 FAM118BQ9BPY3 351 aa7.2□□□□□ -1.26
PDAP1-203ENST00000488214 TCF25Q9BQ70 676 aa7.2□□□□□ -1.26
PDAP1-203ENST00000488214 TRIM51Q9BSJ1 452 aa7.2□□□□□ -1.26
PDAP1-203ENST00000488214 C17orf80Q9BSJ5 609 aa7.2□□□□□ -1.26
PDAP1-203ENST00000488214 SMOC2Q9H3U7 446 aa7.2□□□□□ -1.26
PDAP1-203ENST00000488214 SLITRK6Q9H5Y7 841 aa7.2□□□□□ -1.26
PDAP1-203ENST00000488214 DHX35Q9H5Z1 703 aaKnown RBP7.2□□□□□ -1.26
PDAP1-203ENST00000488214 NMUR1Q9HB89 426 aa7.2□□□□□ -1.26
PDAP1-203ENST00000488214 PCDH18Q9HCL0 1135 aa7.2□□□□□ -1.26
PDAP1-203ENST00000488214 ALG13Q9NP73 1137 aaKnown RBP7.2□□□□□ -1.26
PDAP1-203ENST00000488214 ABCC13Q9NSE7 274 aa7.2□□□□□ -1.26
PDAP1-203ENST00000488214 RRN3Q9NYV6 651 aa7.2□□□□□ -1.26
PDAP1-203ENST00000488214 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP7.2□□□□□ -1.26
PDAP1-203ENST00000488214 NUDT5Q9UKK9 219 aa7.2□□□□□ -1.26
PDAP1-203ENST00000488214 SCML2Q9UQR0 700 aa7.2□□□□□ -1.26
PDAP1-203ENST00000488214 SSX2IPQ9Y2D8 614 aa7.2□□□□□ -1.26
PDAP1-203ENST00000488214 R3HDM2Q9Y2K5 976 aaKnown RBP7.2□□□□□ -1.26
PDAP1-203ENST00000488214 INSL5Q9Y5Q6 135 aa7.2□□□□□ -1.26
PDAP1-203ENST00000488214 CEP290O15078 2479 aa7.2□□□□□ -1.26
PDAP1-203ENST00000488214 DOCK4Q8N1I0 1966 aa7.19□□□□□ -1.26
PDAP1-203ENST00000488214 TARSL2A2RTX5 802 aaKnown RBP7.19□□□□□ -1.26
PDAP1-203ENST00000488214 C3orf70A6NLC5 250 aaPredicted RBP7.19□□□□□ -1.26
PDAP1-203ENST00000488214 FSCN2O14926 492 aa7.19□□□□□ -1.26
PDAP1-203ENST00000488214 IRAK2O43187 625 aa7.19□□□□□ -1.26
PDAP1-203ENST00000488214 CST8O60676 142 aa7.19□□□□□ -1.26
PDAP1-203ENST00000488214 LPXNO60711 386 aa7.19□□□□□ -1.26
PDAP1-203ENST00000488214 ZMYND10O75800 440 aa7.19□□□□□ -1.26
PDAP1-203ENST00000488214 ABLIM3O94929 683 aa7.19□□□□□ -1.26
PDAP1-203ENST00000488214 HEXIM1O94992 359 aaKnown RBP7.19□□□□□ -1.26
PDAP1-203ENST00000488214 TJP3O95049 919 aa7.19□□□□□ -1.26
PDAP1-203ENST00000488214 MOCS2O96007 188 aaPredicted RBP7.19□□□□□ -1.26
PDAP1-203ENST00000488214 ADH1AP07327 375 aa7.19□□□□□ -1.26
PDAP1-203ENST00000488214 CNPP09543 421 aaKnown RBP7.19□□□□□ -1.26
PDAP1-203ENST00000488214 ATF2P15336 505 aa7.19□□□□□ -1.26
PDAP1-203ENST00000488214 KDELR1P24390 212 aa7.19□□□□□ -1.26
PDAP1-203ENST00000488214 CHRNA3P32297 505 aa7.19□□□□□ -1.26
PDAP1-203ENST00000488214 GBP1P32455 592 aa7.19□□□□□ -1.26
PDAP1-203ENST00000488214 ELF1P32519 619 aa7.19□□□□□ -1.26
PDAP1-203ENST00000488214 ALDH1A3P47895 512 aa7.19□□□□□ -1.26
PDAP1-203ENST00000488214 TUFMP49411 452 aaKnown RBP7.19□□□□□ -1.26
PDAP1-203ENST00000488214 PGFP49763 221 aa7.19□□□□□ -1.26
PDAP1-203ENST00000488214 TUBB4BP68371 445 aa7.19□□□□□ -1.26
PDAP1-203ENST00000488214 SLC7A5Q01650 507 aa7.19□□□□□ -1.26
PDAP1-203ENST00000488214 ADCY2Q08462 1091 aa7.19□□□□□ -1.26
PDAP1-203ENST00000488214 TWF1Q12792 350 aa7.19□□□□□ -1.26
PDAP1-203ENST00000488214 EFEMP1Q12805 493 aa7.19□□□□□ -1.26
PDAP1-203ENST00000488214 TAF10Q12962 218 aa7.19□□□□□ -1.26
PDAP1-203ENST00000488214 KLF1Q13351 362 aaPredicted RBP7.19□□□□□ -1.26
PDAP1-203ENST00000488214 SNX1Q13596 522 aa7.19□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms