RNA–Protein interactions for RNA: ENST00000487997.1

PTBP3-208, Transcript of polypyrimidine tract binding protein 3, human

TSL 3

Gene PTBP3, Length 389 nt, Biotype processed transcript, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PTBP3-208	ENST00000487997	SLC9A3R1	O14745	358 aa	Predicted RBP	10	□□□□□ -0.81
PTBP3-208	ENST00000487997	AXIN1	O15169	862 aa		10	□□□□□ -0.81
PTBP3-208	ENST00000487997	NCAM2	O15394	837 aa		10	□□□□□ -0.81
PTBP3-208	ENST00000487997	COCH	O43405	550 aa		10	□□□□□ -0.81
PTBP3-208	ENST00000487997	CALCA	P01258	141 aa		10	□□□□□ -0.81
PTBP3-208	ENST00000487997	ZDHHC11B	P0C7U3	371 aa		10	□□□□□ -0.81
PTBP3-208	ENST00000487997	RARG	P13631	454 aa		10	□□□□□ -0.81
PTBP3-208	ENST00000487997	ATP1A3	P13637	1013 aa		10	□□□□□ -0.81
PTBP3-208	ENST00000487997	GLUL	P15104	373 aa		10	□□□□□ -0.81
PTBP3-208	ENST00000487997	ACADSB	P45954	432 aa		10	□□□□□ -0.81
PTBP3-208	ENST00000487997	RGS7	P49802	495 aa		10	□□□□□ -0.81
PTBP3-208	ENST00000487997	CLCN5	P51795	746 aa		10	□□□□□ -0.81
PTBP3-208	ENST00000487997	SNX16	P57768	344 aa		10	□□□□□ -0.81
PTBP3-208	ENST00000487997	POLR2F	P61218	127 aa	Known RBP	10	□□□□□ -0.81
PTBP3-208	ENST00000487997	YWHAG	P61981	247 aa	Known RBP eCLIP	10	□□□□□ -0.81
PTBP3-208	ENST00000487997	AMPD2	Q01433	879 aa		10	□□□□□ -0.81
PTBP3-208	ENST00000487997	NR1H3	Q13133	447 aa		10	□□□□□ -0.81
PTBP3-208	ENST00000487997	PDGFRL	Q15198	375 aa		10	□□□□□ -0.81
PTBP3-208	ENST00000487997	SYCP1	Q15431	976 aa		10	□□□□□ -0.81
PTBP3-208	ENST00000487997	PTPRN	Q16849	979 aa		10	□□□□□ -0.81
PTBP3-208	ENST00000487997	ITPRIPL2	Q3MIP1	535 aa		10	□□□□□ -0.81
PTBP3-208	ENST00000487997	RAB41	Q5JT25	222 aa		10	□□□□□ -0.81
PTBP3-208	ENST00000487997	C10orf120	Q5SQS8	335 aa		10	□□□□□ -0.81
PTBP3-208	ENST00000487997	BTBD8	Q5XKL5	378 aa		10	□□□□□ -0.81
PTBP3-208	ENST00000487997	C1orf228	Q6PIY5	440 aa		10	□□□□□ -0.81
PTBP3-208	ENST00000487997	ZNF852	Q6ZMS4	543 aa		10	□□□□□ -0.81
PTBP3-208	ENST00000487997	TPRG1	Q6ZUI0	275 aa		10	□□□□□ -0.81
PTBP3-208	ENST00000487997	CACNA2D4	Q7Z3S7	1137 aa		10	□□□□□ -0.81
PTBP3-208	ENST00000487997	RNF139	Q8WU17	664 aa		10	□□□□□ -0.81
PTBP3-208	ENST00000487997	SLC35F5	Q8WV83	523 aa		10	□□□□□ -0.81
PTBP3-208	ENST00000487997	EXOC4	Q96A65	974 aa		10	□□□□□ -0.81
PTBP3-208	ENST00000487997	MSANTD3	Q96H12	275 aa		10	□□□□□ -0.81
PTBP3-208	ENST00000487997	ZFYVE19	Q96K21	471 aa		10	□□□□□ -0.81
PTBP3-208	ENST00000487997	HSFY1	Q96LI6	401 aa		10	□□□□□ -0.81
PTBP3-208	ENST00000487997	NOX5	Q96PH1	765 aa		10	□□□□□ -0.81
PTBP3-208	ENST00000487997	NELL2	Q99435	816 aa		10	□□□□□ -0.81
PTBP3-208	ENST00000487997	ULBP1	Q9BZM6	244 aa		10	□□□□□ -0.81
PTBP3-208	ENST00000487997	C8orf33	Q9H7E9	229 aa	Predicted RBP	10	□□□□□ -0.81
PTBP3-208	ENST00000487997	TBC1D17	Q9HA65	648 aa		10	□□□□□ -0.81
PTBP3-208	ENST00000487997	CBX8	Q9HC52	389 aa		10	□□□□□ -0.81
PTBP3-208	ENST00000487997	CYLD	Q9NQC7	956 aa		10	□□□□□ -0.81
PTBP3-208	ENST00000487997	CNGB3	Q9NQW8	809 aa		10	□□□□□ -0.81
PTBP3-208	ENST00000487997	DUS2	Q9NX74	493 aa	Known RBP	10	□□□□□ -0.81
PTBP3-208	ENST00000487997	CLIC5	Q9NZA1	410 aa		10	□□□□□ -0.81
PTBP3-208	ENST00000487997	DNMT3L	Q9UJW3	386 aa		10	□□□□□ -0.81
PTBP3-208	ENST00000487997	SH3BP1	Q9Y3L3	701 aa		10	□□□□□ -0.81
PTBP3-208	ENST00000487997	KANSL1L	A0AUZ9	987 aa		9.99	□□□□□ -0.81
PTBP3-208	ENST00000487997	LEFTY2	O00292	366 aa		9.99	□□□□□ -0.81
PTBP3-208	ENST00000487997	TULP2	O00295	520 aa		9.99	□□□□□ -0.81
PTBP3-208	ENST00000487997	PIK3R2	O00459	728 aa		9.99	□□□□□ -0.81
PTBP3-208	ENST00000487997	FBXO21	O94952	628 aa		9.99	□□□□□ -0.81
PTBP3-208	ENST00000487997	OLFM2	O95897	454 aa		9.99	□□□□□ -0.81
PTBP3-208	ENST00000487997	PDGFB	P01127	241 aa	Predicted RBP	9.99	□□□□□ -0.81
PTBP3-208	ENST00000487997	TCF3	P15923	654 aa		9.99	□□□□□ -0.81
PTBP3-208	ENST00000487997	SMCP	P49901	116 aa	Predicted RBP	9.99	□□□□□ -0.81
PTBP3-208	ENST00000487997	MLLT6	P55198	1093 aa	Predicted RBP	9.99	□□□□□ -0.81
PTBP3-208	ENST00000487997	STARD6	P59095	220 aa		9.99	□□□□□ -0.81
PTBP3-208	ENST00000487997	USP4	Q13107	963 aa		9.99	□□□□□ -0.81
PTBP3-208	ENST00000487997	RUNX3	Q13761	415 aa		9.99	□□□□□ -0.81
PTBP3-208	ENST00000487997	UBXN2B	Q14CS0	331 aa		9.99	□□□□□ -0.81
PTBP3-208	ENST00000487997	IQCB1	Q15051	598 aa		9.99	□□□□□ -0.81
PTBP3-208	ENST00000487997	ZNF77	Q15935	545 aa		9.99	□□□□□ -0.81
PTBP3-208	ENST00000487997	MEA1	Q16626	185 aa		9.99	□□□□□ -0.81
PTBP3-208	ENST00000487997	PM20D1	Q6GTS8	502 aa		9.99	□□□□□ -0.81
PTBP3-208	ENST00000487997	PMF1	Q6P1K2	205 aa		9.99	□□□□□ -0.81
PTBP3-208	ENST00000487997	LUZP1	Q86V48	1076 aa		9.99	□□□□□ -0.81
PTBP3-208	ENST00000487997	FAM71A	Q8IYT1	594 aa		9.99	□□□□□ -0.81
PTBP3-208	ENST00000487997	CPA6	Q8N4T0	437 aa		9.99	□□□□□ -0.81
PTBP3-208	ENST00000487997	TTC8	Q8TAM2	541 aa		9.99	□□□□□ -0.81
PTBP3-208	ENST00000487997	OSCP1	Q8WVF1	389 aa		9.99	□□□□□ -0.81
PTBP3-208	ENST00000487997	ATP2A3	Q93084	1043 aa		9.99	□□□□□ -0.81
PTBP3-208	ENST00000487997	LRRC3B	Q96PB8	259 aa		9.99	□□□□□ -0.81
PTBP3-208	ENST00000487997	ERGIC2	Q96RQ1	377 aa		9.99	□□□□□ -0.81
PTBP3-208	ENST00000487997	ZSWIM1	Q9BR11	485 aa		9.99	□□□□□ -0.81
PTBP3-208	ENST00000487997	HSD3B7	Q9H2F3	369 aa		9.99	□□□□□ -0.81
PTBP3-208	ENST00000487997	TSPY26P	Q9H489	355 aa		9.99	□□□□□ -0.81
PTBP3-208	ENST00000487997	EBF3	Q9H4W6	596 aa		9.99	□□□□□ -0.81
PTBP3-208	ENST00000487997	NLRC4	Q9NPP4	1024 aa		9.99	□□□□□ -0.81
PTBP3-208	ENST00000487997	OLA1	Q9NTK5	396 aa	Known RBP	9.99	□□□□□ -0.81
PTBP3-208	ENST00000487997	MTPAP	Q9NVV4	582 aa	Known RBP eCLIP	9.99	□□□□□ -0.81
PTBP3-208	ENST00000487997	GTSE1	Q9NYZ3	720 aa		9.99	□□□□□ -0.81
PTBP3-208	ENST00000487997	CFAP97	Q9P2B7	532 aa		9.99	□□□□□ -0.81
PTBP3-208	ENST00000487997	TBC1D14	Q9P2M4	693 aa		9.99	□□□□□ -0.81
PTBP3-208	ENST00000487997	LSM7	Q9UK45	103 aa	Known RBP	9.99	□□□□□ -0.81
PTBP3-208	ENST00000487997	AJAP1	Q9UKB5	411 aa	Predicted RBP	9.99	□□□□□ -0.81
PTBP3-208	ENST00000487997	STRIP2	Q9ULQ0	834 aa		9.99	□□□□□ -0.81
PTBP3-208	ENST00000487997	SIT1	Q9Y3P8	196 aa		9.99	□□□□□ -0.81
PTBP3-208	ENST00000487997	HCN4	Q9Y3Q4	1203 aa		9.99	□□□□□ -0.81
PTBP3-208	ENST00000487997	PIAS3	Q9Y6X2	628 aa		9.99	□□□□□ -0.81
PTBP3-208	ENST00000487997	E2F8	A0AVK6	867 aa		9.98	□□□□□ -0.81
PTBP3-208	ENST00000487997		F8VZ95	297 aa		9.98	□□□□□ -0.81
PTBP3-208	ENST00000487997	SART1	O43290	800 aa	Known RBP	9.98	□□□□□ -0.81
PTBP3-208	ENST00000487997	NFATC1	O95644	943 aa		9.98	□□□□□ -0.81
PTBP3-208	ENST00000487997	CCDC172	P0C7W6	258 aa		9.98	□□□□□ -0.81
PTBP3-208	ENST00000487997	PNMA6A	P0CW24	399 aa	Predicted RBP	9.98	□□□□□ -0.81
PTBP3-208	ENST00000487997	IRF1	P10914	325 aa		9.98	□□□□□ -0.81
PTBP3-208	ENST00000487997	AVPR2	P30518	371 aa		9.98	□□□□□ -0.81
PTBP3-208	ENST00000487997	STAT1	P42224	750 aa		9.98	□□□□□ -0.81
PTBP3-208	ENST00000487997	GPD2	P43304	727 aa		9.98	□□□□□ -0.81
PTBP3-208	ENST00000487997	KLK7	P49862	253 aa		9.98	□□□□□ -0.81

Retrieved 100 of 20,778 RNA–protein pairs in 378.8 ms