RNA–Protein interactions for RNA: ENST00000487558.1

CUL3-211, Transcript of cullin 3, humanhuman

TSL 2

Gene CUL3, Length 1,093 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUL3-211ENST00000487558 USP39Q53GS9 565 aaKnown RBP6.55□□□□□ -1.36
CUL3-211ENST00000487558 TTC22Q5TAA0 569 aa6.55□□□□□ -1.36
CUL3-211ENST00000487558 MAATS1Q7Z4T9 603 aa6.55□□□□□ -1.36
CUL3-211ENST00000487558 CAND1Q86VP6 1230 aaKnown RBP6.55□□□□□ -1.36
CUL3-211ENST00000487558 C1orf210Q8IVY1 113 aa6.55□□□□□ -1.36
CUL3-211ENST00000487558 HMGB4Q8WW32 186 aa6.55□□□□□ -1.36
CUL3-211ENST00000487558 OVCA2Q8WZ82 227 aa6.55□□□□□ -1.36
CUL3-211ENST00000487558 HERVK_113Q902F9 699 aa6.55□□□□□ -1.36
CUL3-211ENST00000487558 GLG1Q92896 1179 aa6.55□□□□□ -1.36
CUL3-211ENST00000487558 EXTL1Q92935 676 aa6.55□□□□□ -1.36
CUL3-211ENST00000487558 ZNF703Q9H7S9 590 aaPredicted RBP6.55□□□□□ -1.36
CUL3-211ENST00000487558 GGA3Q9NZ52 723 aa6.55□□□□□ -1.36
CUL3-211ENST00000487558 TMEM98Q9Y2Y6 226 aa6.55□□□□□ -1.36
CUL3-211ENST00000487558 KIAA0355O15063 1070 aa6.54□□□□□ -1.36
CUL3-211ENST00000487558 NARSO43776 548 aaKnown RBP6.54□□□□□ -1.36
CUL3-211ENST00000487558 CBFA2T3O75081 653 aa6.54□□□□□ -1.36
CUL3-211ENST00000487558 RPP40O75818 363 aaKnown RBP6.54□□□□□ -1.36
CUL3-211ENST00000487558 KRT38O76015 456 aa6.54□□□□□ -1.36
CUL3-211ENST00000487558 CER1O95813 267 aa6.54□□□□□ -1.36
CUL3-211ENST00000487558 ONECUT2O95948 504 aa6.54□□□□□ -1.36
CUL3-211ENST00000487558 PDHA1P08559 390 aa6.54□□□□□ -1.36
CUL3-211ENST00000487558 SERPINA4P29622 427 aa6.54□□□□□ -1.36
CUL3-211ENST00000487558 LIPAP38571 399 aa6.54□□□□□ -1.36
CUL3-211ENST00000487558 EIF4A1P60842 406 aaKnown RBP6.54□□□□□ -1.36
CUL3-211ENST00000487558 TGFB2P61812 414 aa6.54□□□□□ -1.36
CUL3-211ENST00000487558 UBE3AQ05086 875 aa6.54□□□□□ -1.36
CUL3-211ENST00000487558 TMEM196Q5HYL7 178 aa6.54□□□□□ -1.36
CUL3-211ENST00000487558 RSRC2Q7L4I2 434 aaKnown RBP6.54□□□□□ -1.36
CUL3-211ENST00000487558 ANKS1BQ7Z6G8 1248 aa6.54□□□□□ -1.36
CUL3-211ENST00000487558 TMTC1Q8IUR5 882 aa6.54□□□□□ -1.36
CUL3-211ENST00000487558 CPOQ8IVL8 374 aa6.54□□□□□ -1.36
CUL3-211ENST00000487558 SLC25A43Q8WUT9 341 aaPredicted RBP6.54□□□□□ -1.36
CUL3-211ENST00000487558 SOCS4Q8WXH5 440 aa6.54□□□□□ -1.36
CUL3-211ENST00000487558 VPS50Q96JG6 964 aa6.54□□□□□ -1.36
CUL3-211ENST00000487558 PGBD1Q96JS3 809 aa6.54□□□□□ -1.36
CUL3-211ENST00000487558 ADAM2Q99965 735 aa6.54□□□□□ -1.36
CUL3-211ENST00000487558 DPCDQ9BVM2 203 aaPredicted RBP6.54□□□□□ -1.36
CUL3-211ENST00000487558 SLC26A6Q9BXS9 759 aa6.54□□□□□ -1.36
CUL3-211ENST00000487558 SERHL2Q9H4I8 314 aa6.54□□□□□ -1.36
CUL3-211ENST00000487558 CHODLQ9H9P2 273 aa6.54□□□□□ -1.36
CUL3-211ENST00000487558 G6PC2Q9NQR9 355 aa6.54□□□□□ -1.36
CUL3-211ENST00000487558 VPS45Q9NRW7 570 aa6.54□□□□□ -1.36
CUL3-211ENST00000487558 RASSF1Q9NS23 344 aa6.54□□□□□ -1.36
CUL3-211ENST00000487558 LIN7CQ9NUP9 197 aaKnown RBP6.54□□□□□ -1.36
CUL3-211ENST00000487558 TERF2IPQ9NYB0 399 aa6.54□□□□□ -1.36
CUL3-211ENST00000487558 DKK2Q9UBU2 259 aa6.54□□□□□ -1.36
CUL3-211ENST00000487558 CCDC196A0A1B0GTZ2 297 aa6.53□□□□□ -1.36
CUL3-211ENST00000487558 SPDEFO95238 335 aa6.53□□□□□ -1.36
CUL3-211ENST00000487558 TFRCP02786 760 aaKnown RBP6.53□□□□□ -1.36
CUL3-211ENST00000487558 TNFAIP3P21580 790 aa6.53□□□□□ -1.36
CUL3-211ENST00000487558 PBX1P40424 430 aa6.53□□□□□ -1.36
CUL3-211ENST00000487558 GEMIN4P57678 1058 aaKnown RBP6.53□□□□□ -1.36
CUL3-211ENST00000487558 VAMP2P63027 116 aa6.53□□□□□ -1.36
CUL3-211ENST00000487558 EIF2B5Q13144 721 aaKnown RBP6.53□□□□□ -1.36
CUL3-211ENST00000487558 SEMA3BQ13214 749 aa6.53□□□□□ -1.36
CUL3-211ENST00000487558 SF3B3Q15393 1217 aaKnown RBP6.53□□□□□ -1.36
CUL3-211ENST00000487558 TBCCQ15814 346 aa6.53□□□□□ -1.36
CUL3-211ENST00000487558 TBRG1Q3YBR2 411 aa6.53□□□□□ -1.36
CUL3-211ENST00000487558 TIGD2Q4W5G0 525 aa6.53□□□□□ -1.36
CUL3-211ENST00000487558 ZNF618Q5T7W0 954 aa6.53□□□□□ -1.36
CUL3-211ENST00000487558 MSANTD2Q6P1R3 559 aa6.53□□□□□ -1.36
CUL3-211ENST00000487558 KRT27Q7Z3Y8 459 aa6.53□□□□□ -1.36
CUL3-211ENST00000487558 LNX2Q8N448 690 aa6.53□□□□□ -1.36
CUL3-211ENST00000487558 METTL25Q8N6Q8 603 aa6.53□□□□□ -1.36
CUL3-211ENST00000487558 NGDNQ8NEJ9 315 aaKnown RBP6.53□□□□□ -1.36
CUL3-211ENST00000487558 SUPT20HQ8NEM7 779 aa6.53□□□□□ -1.36
CUL3-211ENST00000487558 TOR1AIP2Q8NFQ8 470 aa6.53□□□□□ -1.36
CUL3-211ENST00000487558 CEP70Q8NHQ1 597 aa6.53□□□□□ -1.36
CUL3-211ENST00000487558 SSH3Q8TE77 659 aa6.53□□□□□ -1.36
CUL3-211ENST00000487558 LPIN2Q92539 896 aa6.53□□□□□ -1.36
CUL3-211ENST00000487558 FKBP10Q96AY3 582 aa6.53□□□□□ -1.36
CUL3-211ENST00000487558 PAAF1Q9BRP4 392 aa6.53□□□□□ -1.36
CUL3-211ENST00000487558 ALG8Q9BVK2 526 aa6.53□□□□□ -1.36
CUL3-211ENST00000487558 CCDC134Q9H6E4 229 aa6.53□□□□□ -1.36
CUL3-211ENST00000487558 UBN1Q9NPG3 1134 aa6.53□□□□□ -1.36
CUL3-211ENST00000487558 RXFP3Q9NSD7 469 aa6.53□□□□□ -1.36
CUL3-211ENST00000487558 TMLHEQ9NVH6 421 aa6.53□□□□□ -1.36
CUL3-211ENST00000487558 CEP72Q9P209 647 aa6.53□□□□□ -1.36
CUL3-211ENST00000487558 TESQ9UGI8 421 aaKnown RBP6.53□□□□□ -1.36
CUL3-211ENST00000487558 SH2B3Q9UQQ2 575 aa6.53□□□□□ -1.36
CUL3-211ENST00000487558 DERAQ9Y315 318 aa6.53□□□□□ -1.36
CUL3-211ENST00000487558 UNC119BA6NIH7 251 aa6.52□□□□□ -1.37
CUL3-211ENST00000487558 A8MVJ9 347 aa6.52□□□□□ -1.37
CUL3-211ENST00000487558 KIF28PB7ZC32 967 aa6.52□□□□□ -1.37
CUL3-211ENST00000487558 PROM1O43490 865 aa6.52□□□□□ -1.37
CUL3-211ENST00000487558 ZNF202O95125 648 aa6.52□□□□□ -1.37
CUL3-211ENST00000487558 VNN1O95497 513 aa6.52□□□□□ -1.37
CUL3-211ENST00000487558 JUPP14923 745 aa6.52□□□□□ -1.37
CUL3-211ENST00000487558 DRD1P21728 446 aa6.52□□□□□ -1.37
CUL3-211ENST00000487558 ELF1P32519 619 aa6.52□□□□□ -1.37
CUL3-211ENST00000487558 CASP2P42575 452 aa6.52□□□□□ -1.37
CUL3-211ENST00000487558 RBM5P52756 815 aaKnown RBP eCLIP6.52□□□□□ -1.37
CUL3-211ENST00000487558 KRTAP1-1Q07627 177 aa6.52□□□□□ -1.37
CUL3-211ENST00000487558 ABHD18Q0P651 414 aa6.52□□□□□ -1.37
CUL3-211ENST00000487558 SF3A3Q12874 501 aaKnown RBP eCLIP6.52□□□□□ -1.37
CUL3-211ENST00000487558 MTAPQ13126 283 aa6.52□□□□□ -1.37
CUL3-211ENST00000487558 MAPK7Q13164 816 aa6.52□□□□□ -1.37
CUL3-211ENST00000487558 SIM2Q14190 667 aaPredicted RBP6.52□□□□□ -1.37
CUL3-211ENST00000487558 ANKRD1Q15327 319 aa6.52□□□□□ -1.37
CUL3-211ENST00000487558 SMAD1Q15797 465 aaKnown RBP6.52□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms