RNA–Protein interactions for RNA: ENST00000486039.1

SNX5-213, Transcript of sorting nexin 5, humanhuman

TSL 1 (best) BASIC

Gene SNX5, Length 602 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX5-213ENST00000486039 GMEB2Q9UKD1 530 aa20.51■□□□□ 0.87
SNX5-213ENST00000486039 RAB23Q9ULC3 237 aa20.51■□□□□ 0.87
SNX5-213ENST00000486039 GTPBP10A4D1E9 387 aaKnown RBP20.5■□□□□ 0.87
SNX5-213ENST00000486039 HOXC11O43248 304 aaPredicted RBP20.5■□□□□ 0.87
SNX5-213ENST00000486039 KRT5P13647 590 aa20.5■□□□□ 0.87
SNX5-213ENST00000486039 LCP1P13796 627 aa20.5■□□□□ 0.87
SNX5-213ENST00000486039 PON1P27169 355 aa20.5■□□□□ 0.87
SNX5-213ENST00000486039 HOXA6P31267 233 aa20.5■□□□□ 0.87
SNX5-213ENST00000486039 MAN2A1Q16706 1144 aa20.5■□□□□ 0.87
SNX5-213ENST00000486039 RSPO4Q2I0M5 234 aaPredicted RBP20.5■□□□□ 0.87
SNX5-213ENST00000486039 HSP90AA4PQ58FG1 418 aa20.5■□□□□ 0.87
SNX5-213ENST00000486039 HEATR6Q6AI08 1181 aaKnown RBP20.5■□□□□ 0.87
SNX5-213ENST00000486039 ENOSF1Q7L5Y1 443 aa20.5■□□□□ 0.87
SNX5-213ENST00000486039 LONP2Q86WA8 852 aa20.5■□□□□ 0.87
SNX5-213ENST00000486039 FAM114A1Q8IWE2 563 aa20.5■□□□□ 0.87
SNX5-213ENST00000486039 ETFBKMTQ8IXQ9 262 aa20.5■□□□□ 0.87
SNX5-213ENST00000486039 SIX6OS1Q8N1H7 587 aa20.5■□□□□ 0.87
SNX5-213ENST00000486039 SCML4Q8N228 414 aa20.5■□□□□ 0.87
SNX5-213ENST00000486039 PHTF2Q8N3S3 785 aa20.5■□□□□ 0.87
SNX5-213ENST00000486039 NAT16Q8N8M0 369 aa20.5■□□□□ 0.87
SNX5-213ENST00000486039 APEX2Q9UBZ4 518 aa20.5■□□□□ 0.87
SNX5-213ENST00000486039 LSM7Q9UK45 103 aaKnown RBP20.5■□□□□ 0.87
SNX5-213ENST00000486039 A0A0A0MRY4 1105 aa20.49■□□□□ 0.87
SNX5-213ENST00000486039 YJEFN3A6XGL0 299 aa20.49■□□□□ 0.87
SNX5-213ENST00000486039 E7ENQ6 273 aa20.49■□□□□ 0.87
SNX5-213ENST00000486039 PIK3R2O00459 728 aa20.49■□□□□ 0.87
SNX5-213ENST00000486039 KLKB1P03952 638 aa20.49■□□□□ 0.87
SNX5-213ENST00000486039 MFAP3P55082 362 aa20.49■□□□□ 0.87
SNX5-213ENST00000486039 SEC13P55735 322 aa20.49■□□□□ 0.87
SNX5-213ENST00000486039 DAOAP59103 153 aa20.49■□□□□ 0.87
SNX5-213ENST00000486039 COG7P83436 770 aa20.49■□□□□ 0.87
SNX5-213ENST00000486039 ANO4Q32M45 955 aa20.49■□□□□ 0.87
SNX5-213ENST00000486039 CT47A1Q5JQC4 288 aaPredicted RBP20.49■□□□□ 0.87
SNX5-213ENST00000486039 MIIPQ5JXC2 388 aa20.49■□□□□ 0.87
SNX5-213ENST00000486039 USP33Q8TEY7 942 aa20.49■□□□□ 0.87
SNX5-213ENST00000486039 SIX2Q9NPC8 291 aa20.49■□□□□ 0.87
SNX5-213ENST00000486039 ACP6Q9NPH0 428 aa20.49■□□□□ 0.87
SNX5-213ENST00000486039 CNGB3Q9NQW8 809 aa20.49■□□□□ 0.87
SNX5-213ENST00000486039 SAMSN1Q9NSI8 373 aaKnown RBP20.49■□□□□ 0.87
SNX5-213ENST00000486039 SLC8A2Q9UPR5 921 aa20.49■□□□□ 0.87
SNX5-213ENST00000486039 CACNA1AO00555 2505 aa20.48■□□□□ 0.87
SNX5-213ENST00000486039 BECN2A8MW95 431 aa20.48■□□□□ 0.87
SNX5-213ENST00000486039 HRO43593 1189 aa20.48■□□□□ 0.87
SNX5-213ENST00000486039 KAT7O95251 611 aa20.48■□□□□ 0.87
SNX5-213ENST00000486039 HMBSP08397 361 aa20.48■□□□□ 0.87
SNX5-213ENST00000486039 CHRM1P11229 460 aaPredicted RBP20.48■□□□□ 0.87
SNX5-213ENST00000486039 TGM1P22735 817 aa20.48■□□□□ 0.87
SNX5-213ENST00000486039 CNR2P34972 360 aa20.48■□□□□ 0.87
SNX5-213ENST00000486039 GPD2P43304 727 aa20.48■□□□□ 0.87
SNX5-213ENST00000486039 PXNP49023 591 aaPredicted RBP20.48■□□□□ 0.87
SNX5-213ENST00000486039 KDSRQ06136 332 aa20.48■□□□□ 0.87
SNX5-213ENST00000486039 LPAL2Q16609 132 aa20.48■□□□□ 0.87
SNX5-213ENST00000486039 ARHGAP44Q17R89 818 aa20.48■□□□□ 0.87
SNX5-213ENST00000486039 VWA3BQ502W6 1294 aa20.48■□□□□ 0.87
SNX5-213ENST00000486039 BSPRYQ5W0U4 402 aa20.48■□□□□ 0.87
SNX5-213ENST00000486039 BTBD8Q5XKL5 378 aa20.48■□□□□ 0.87
SNX5-213ENST00000486039 LAIR1Q6GTX8 287 aa20.48■□□□□ 0.87
SNX5-213ENST00000486039 PRR23BQ6ZRT6 265 aa20.48■□□□□ 0.87
SNX5-213ENST00000486039 TPGS1Q6ZTW0 290 aa20.48■□□□□ 0.87
SNX5-213ENST00000486039 RSRC2Q7L4I2 434 aaKnown RBP20.48■□□□□ 0.87
SNX5-213ENST00000486039 SYT13Q7L8C5 426 aa20.48■□□□□ 0.87
SNX5-213ENST00000486039 HSFY1Q96LI6 401 aa20.48■□□□□ 0.87
SNX5-213ENST00000486039 FAM81BQ96LP2 452 aa20.48■□□□□ 0.87
SNX5-213ENST00000486039 TUBGCP2Q9BSJ2 902 aa20.48■□□□□ 0.87
SNX5-213ENST00000486039 NDST4Q9H3R1 872 aa20.48■□□□□ 0.87
SNX5-213ENST00000486039 ARHGEF4Q9NR80 690 aa20.48■□□□□ 0.87
SNX5-213ENST00000486039 MARCH2Q9P0N8 246 aa20.48■□□□□ 0.87
SNX5-213ENST00000486039 AJAP1Q9UKB5 411 aaPredicted RBP20.48■□□□□ 0.87
SNX5-213ENST00000486039 USP18Q9UMW8 372 aa20.48■□□□□ 0.87
SNX5-213ENST00000486039 MYOFQ9NZM1 2061 aa20.48■□□□□ 0.87
SNX5-213ENST00000486039 ATG2BQ96BY7 2078 aa20.47■□□□□ 0.87
SNX5-213ENST00000486039 SLC12A8A0AV02 714 aa20.47■□□□□ 0.87
SNX5-213ENST00000486039 PALM2-AKAP2B1ALY0 433 aaPredicted RBP20.47■□□□□ 0.87
SNX5-213ENST00000486039 GOLGA6L22H0YM25 854 aa20.47■□□□□ 0.87
SNX5-213ENST00000486039 TRIM24O15164 1050 aa20.47■□□□□ 0.87
SNX5-213ENST00000486039 TULP3O75386 442 aa20.47■□□□□ 0.87
SNX5-213ENST00000486039 APODP05090 189 aa20.47■□□□□ 0.87
SNX5-213ENST00000486039 PRKCSHP14314 528 aaPredicted RBP20.47■□□□□ 0.87
SNX5-213ENST00000486039 GRIA2P42262 883 aa20.47■□□□□ 0.87
SNX5-213ENST00000486039 SRSF5Q13243 272 aaKnown RBP20.47■□□□□ 0.87
SNX5-213ENST00000486039 SIM2Q14190 667 aaPredicted RBP20.47■□□□□ 0.87
SNX5-213ENST00000486039 C2orf27AQ580R0 203 aa20.47■□□□□ 0.87
SNX5-213ENST00000486039 DPY19L2P1Q6NXN4 242 aa20.47■□□□□ 0.87
SNX5-213ENST00000486039 WDR5BQ86VZ2 330 aa20.47■□□□□ 0.87
SNX5-213ENST00000486039 CCDC26Q8TAB7 109 aa20.47■□□□□ 0.87
SNX5-213ENST00000486039 CLEC4CQ8WTT0 213 aa20.47■□□□□ 0.87
SNX5-213ENST00000486039 ZNF606Q8WXB4 792 aa20.47■□□□□ 0.87
SNX5-213ENST00000486039 EDEM1Q92611 657 aa20.47■□□□□ 0.87
SNX5-213ENST00000486039 P2RY11Q96G91 374 aa20.47■□□□□ 0.87
SNX5-213ENST00000486039 PARD6AQ9NPB6 346 aa20.47■□□□□ 0.87
SNX5-213ENST00000486039 MARK1Q9P0L2 795 aa20.47■□□□□ 0.87
SNX5-213ENST00000486039 STRIP2Q9ULQ0 834 aa20.47■□□□□ 0.87
SNX5-213ENST00000486039 PRR5-ARHGAP8B1AHC4 643 aa20.46■□□□□ 0.87
SNX5-213ENST00000486039 KCNJ18B7U540 433 aa20.46■□□□□ 0.87
SNX5-213ENST00000486039 NEDD8-MDP1E9PL57 170 aa20.46■□□□□ 0.87
SNX5-213ENST00000486039 LETM1O95202 739 aaPredicted RBP20.46■□□□□ 0.87
SNX5-213ENST00000486039 RETP07949 1114 aa20.46■□□□□ 0.87
SNX5-213ENST00000486039 SDHBP21912 280 aa20.46■□□□□ 0.87
SNX5-213ENST00000486039 GNA15P30679 374 aa20.46■□□□□ 0.87
SNX5-213ENST00000486039 CORO1AP31146 461 aaKnown RBP20.46■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms