RNA–Protein interactions for RNA: ENST00000485591.1

COL6A2-208, Transcript of collagen type VI alpha 2 chain, humanhuman

TSL 3

Gene COL6A2, Length 777 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A2-208ENST00000485591 VIPR2P41587 438 aa20.83■□□□□ 0.93
COL6A2-208ENST00000485591 USP4Q13107 963 aa20.83■□□□□ 0.93
COL6A2-208ENST00000485591 TANGO2Q6ICL3 276 aa20.83■□□□□ 0.93
COL6A2-208ENST00000485591 ALKBH5Q6P6C2 394 aaKnown RBP20.83■□□□□ 0.93
COL6A2-208ENST00000485591 C3orf20Q8ND61 904 aa20.83■□□□□ 0.93
COL6A2-208ENST00000485591 RSPRY1Q96DX4 576 aa20.83■□□□□ 0.93
COL6A2-208ENST00000485591 CCDC42Q96M95 316 aa20.83■□□□□ 0.93
COL6A2-208ENST00000485591 KXD1Q9BQD3 176 aa20.83■□□□□ 0.93
COL6A2-208ENST00000485591 KCNK12Q9HB15 430 aa20.83■□□□□ 0.93
COL6A2-208ENST00000485591 HEPACAM2A8MVW5 462 aa20.82■□□□□ 0.92
COL6A2-208ENST00000485591 GOLGA8SH3BPF8 625 aa20.82■□□□□ 0.92
COL6A2-208ENST00000485591 DPYSL4O14531 572 aa20.82■□□□□ 0.92
COL6A2-208ENST00000485591 CAPN9O14815 690 aa20.82■□□□□ 0.92
COL6A2-208ENST00000485591 MDM4O15151 490 aa20.82■□□□□ 0.92
COL6A2-208ENST00000485591 AKR1B10O60218 316 aa20.82■□□□□ 0.92
COL6A2-208ENST00000485591 GRAP2O75791 330 aa20.82■□□□□ 0.92
COL6A2-208ENST00000485591 GSDMDP57764 484 aa20.82■□□□□ 0.92
COL6A2-208ENST00000485591 ZXDBP98169 803 aa20.82■□□□□ 0.92
COL6A2-208ENST00000485591 GFPT1Q06210 699 aaPredicted RBP20.82■□□□□ 0.92
COL6A2-208ENST00000485591 EFEMP1Q12805 493 aa20.82■□□□□ 0.92
COL6A2-208ENST00000485591 ZNF77Q15935 545 aa20.82■□□□□ 0.92
COL6A2-208ENST00000485591 VITQ6UXI7 678 aa20.82■□□□□ 0.92
COL6A2-208ENST00000485591 ARCQ7LC44 396 aa20.82■□□□□ 0.92
COL6A2-208ENST00000485591 DDX42Q86XP3 938 aaKnown RBP eCLIP20.82■□□□□ 0.92
COL6A2-208ENST00000485591 GJD3Q8N144 294 aa20.82■□□□□ 0.92
COL6A2-208ENST00000485591 ST13P5Q8NFI4 369 aaPredicted RBP20.82■□□□□ 0.92
COL6A2-208ENST00000485591 TRIM11Q96F44 468 aa20.82■□□□□ 0.92
COL6A2-208ENST00000485591 KLF16Q9BXK1 252 aaPredicted RBP20.82■□□□□ 0.92
COL6A2-208ENST00000485591 SMOC2Q9H3U7 446 aa20.82■□□□□ 0.92
COL6A2-208ENST00000485591 SMPD4Q9NXE4 827 aa20.82■□□□□ 0.92
COL6A2-208ENST00000485591 MARCH2Q9P0N8 246 aa20.82■□□□□ 0.92
COL6A2-208ENST00000485591 RASAL2Q9UJF2 1139 aa20.82■□□□□ 0.92
COL6A2-208ENST00000485591 TMEM59LQ9UK28 342 aa20.82■□□□□ 0.92
COL6A2-208ENST00000485591 NAALADL1Q9UQQ1 740 aa20.82■□□□□ 0.92
COL6A2-208ENST00000485591 MYO10Q9HD67 2058 aa20.82■□□□□ 0.92
COL6A2-208ENST00000485591 TCRBV5S1A1TA0A578 114 aa20.81■□□□□ 0.92
COL6A2-208ENST00000485591 MYBL1P10243 752 aa20.81■□□□□ 0.92
COL6A2-208ENST00000485591 RRM1P23921 792 aa20.81■□□□□ 0.92
COL6A2-208ENST00000485591 CCDC122Q5T0U0 273 aa20.81■□□□□ 0.92
COL6A2-208ENST00000485591 SYPL2Q5VXT5 272 aa20.81■□□□□ 0.92
COL6A2-208ENST00000485591 DEFB106AQ8N104 65 aa20.81■□□□□ 0.92
COL6A2-208ENST00000485591 BPIFB1Q8TDL5 484 aa20.81■□□□□ 0.92
COL6A2-208ENST00000485591 DQX1Q8TE96 717 aaKnown RBP20.81■□□□□ 0.92
COL6A2-208ENST00000485591 SH3RF2Q8TEC5 729 aa20.81■□□□□ 0.92
COL6A2-208ENST00000485591 DEPDC1BQ8WUY9 529 aa20.81■□□□□ 0.92
COL6A2-208ENST00000485591 RSAD2Q8WXG1 361 aa20.81■□□□□ 0.92
COL6A2-208ENST00000485591 NECAB3Q96P71 396 aaPredicted RBP20.81■□□□□ 0.92
COL6A2-208ENST00000485591 RPP25Q9BUL9 199 aaKnown RBP20.81■□□□□ 0.92
COL6A2-208ENST00000485591 PLA2G2FQ9BZM2 168 aa20.81■□□□□ 0.92
COL6A2-208ENST00000485591 METTL5Q9NRN9 209 aaKnown RBP20.81■□□□□ 0.92
COL6A2-208ENST00000485591 LEFTY2O00292 366 aa20.8■□□□□ 0.92
COL6A2-208ENST00000485591 ASGR2P07307 311 aa20.8■□□□□ 0.92
COL6A2-208ENST00000485591 PSMC3P17980 439 aa20.8■□□□□ 0.92
COL6A2-208ENST00000485591 NOS2P35228 1153 aa20.8■□□□□ 0.92
COL6A2-208ENST00000485591 MATKP42679 507 aa20.8■□□□□ 0.92
COL6A2-208ENST00000485591 FCHO2Q0JRZ9 810 aa20.8■□□□□ 0.92
COL6A2-208ENST00000485591 DCAF6Q58WW2 860 aa20.8■□□□□ 0.92
COL6A2-208ENST00000485591 DNAJC24Q6P3W2 148 aa20.8■□□□□ 0.92
COL6A2-208ENST00000485591 PHLDB2Q86SQ0 1253 aa20.8■□□□□ 0.92
COL6A2-208ENST00000485591 DNAAF5Q86Y56 855 aa20.8■□□□□ 0.92
COL6A2-208ENST00000485591 MIB1Q86YT6 1006 aa20.8■□□□□ 0.92
COL6A2-208ENST00000485591 TMTC1Q8IUR5 882 aa20.8■□□□□ 0.92
COL6A2-208ENST00000485591 MFSD6LQ8IWD5 586 aa20.8■□□□□ 0.92
COL6A2-208ENST00000485591 CCDC170Q8IYT3 715 aa20.8■□□□□ 0.92
COL6A2-208ENST00000485591 KIAA1958Q8N8K9 716 aa20.8■□□□□ 0.92
COL6A2-208ENST00000485591 RIN3Q8TB24 985 aa20.8■□□□□ 0.92
COL6A2-208ENST00000485591 ZNF653Q96CK0 615 aa20.8■□□□□ 0.92
COL6A2-208ENST00000485591 LRRC3BQ96PB8 259 aa20.8■□□□□ 0.92
COL6A2-208ENST00000485591 UHRF1Q96T88 793 aaPredicted RBP20.8■□□□□ 0.92
COL6A2-208ENST00000485591 CD320Q9NPF0 282 aa20.8■□□□□ 0.92
COL6A2-208ENST00000485591 HBS1LQ9Y450 684 aaKnown RBP20.8■□□□□ 0.92
COL6A2-208ENST00000485591 COL4A2P08572 1712 aa20.8■□□□□ 0.92
COL6A2-208ENST00000485591 UNC80Q8N2C7 3258 aa20.79■□□□□ 0.92
COL6A2-208ENST00000485591 SIGLEC16A6NMB1 481 aa20.79■□□□□ 0.92
COL6A2-208ENST00000485591 FLT3P36888 993 aa20.79■□□□□ 0.92
COL6A2-208ENST00000485591 COG7P83436 770 aa20.79■□□□□ 0.92
COL6A2-208ENST00000485591 NNTQ13423 1086 aa20.79■□□□□ 0.92
COL6A2-208ENST00000485591 MTF1Q14872 753 aa20.79■□□□□ 0.92
COL6A2-208ENST00000485591 PPP1R15BQ5SWA1 713 aa20.79■□□□□ 0.92
COL6A2-208ENST00000485591 PLEKHA7Q6IQ23 1121 aa20.79■□□□□ 0.92
COL6A2-208ENST00000485591 RNF135Q8IUD6 432 aa20.79■□□□□ 0.92
COL6A2-208ENST00000485591 TMEM139Q8IV31 216 aa20.79■□□□□ 0.92
COL6A2-208ENST00000485591 SLC44A3Q8N4M1 653 aa20.79■□□□□ 0.92
COL6A2-208ENST00000485591 ANP32BQ92688 251 aaKnown RBP20.79■□□□□ 0.92
COL6A2-208ENST00000485591 SERPINB11Q96P15 392 aa20.79■□□□□ 0.92
COL6A2-208ENST00000485591 BAG1Q99933 345 aaPredicted RBP20.79■□□□□ 0.92
COL6A2-208ENST00000485591 SELENOOQ9BVL4 669 aa20.79■□□□□ 0.92
COL6A2-208ENST00000485591 GKN1Q9NS71 199 aa20.79■□□□□ 0.92
COL6A2-208ENST00000485591 SPTLC3Q9NUV7 552 aa20.79■□□□□ 0.92
COL6A2-208ENST00000485591 RRN3Q9NYV6 651 aa20.79■□□□□ 0.92
COL6A2-208ENST00000485591 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP20.79■□□□□ 0.92
COL6A2-208ENST00000485591 CFAP97Q9P2B7 532 aa20.79■□□□□ 0.92
COL6A2-208ENST00000485591 CNOT8Q9UFF9 292 aaKnown RBP20.79■□□□□ 0.92
COL6A2-208ENST00000485591 SFMBT1Q9UHJ3 866 aa20.79■□□□□ 0.92
COL6A2-208ENST00000485591 STAP1Q9ULZ2 295 aa20.79■□□□□ 0.92
COL6A2-208ENST00000485591 SLC12A8A0AV02 714 aa20.78■□□□□ 0.92
COL6A2-208ENST00000485591 ATMINO43313 823 aaPredicted RBP20.78■□□□□ 0.92
COL6A2-208ENST00000485591 IGLV3-25P01717 112 aa20.78■□□□□ 0.92
COL6A2-208ENST00000485591 KRT3P12035 628 aa20.78■□□□□ 0.92
COL6A2-208ENST00000485591 KPNA1P52294 538 aaPredicted RBP20.78■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms