RNA–Protein interactions for RNA: ENST00000485247.1

PTPN4-210, Transcript of protein tyrosine phosphatase, non-receptor type 4, humanhuman

TSL 3

Gene PTPN4, Length 590 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4-210ENST00000485247 EXOC8Q8IYI6 725 aa5.83□□□□□ -1.48
PTPN4-210ENST00000485247 REXO1Q8N1G1 1221 aaKnown RBP5.83□□□□□ -1.48
PTPN4-210ENST00000485247 TMTC2Q8N394 836 aa5.83□□□□□ -1.48
PTPN4-210ENST00000485247 GOLM1Q8NBJ4 401 aa5.83□□□□□ -1.48
PTPN4-210ENST00000485247 FAM13CQ8NE31 585 aa5.83□□□□□ -1.48
PTPN4-210ENST00000485247 CEP76Q8TAP6 659 aa5.83□□□□□ -1.48
PTPN4-210ENST00000485247 SETD7Q8WTS6 366 aaKnown RBP5.83□□□□□ -1.48
PTPN4-210ENST00000485247 CYB5D2Q8WUJ1 264 aa5.83□□□□□ -1.48
PTPN4-210ENST00000485247 TCP11Q8WWU5 503 aa5.83□□□□□ -1.48
PTPN4-210ENST00000485247 COX4I2Q96KJ9 171 aa5.83□□□□□ -1.48
PTPN4-210ENST00000485247 LNPKQ9C0E8 428 aa5.83□□□□□ -1.48
PTPN4-210ENST00000485247 CAPN10Q9HC96 672 aa5.83□□□□□ -1.48
PTPN4-210ENST00000485247 KBTBD4Q9NVX7 518 aa5.83□□□□□ -1.48
PTPN4-210ENST00000485247 REV1Q9UBZ9 1251 aa5.83□□□□□ -1.48
PTPN4-210ENST00000485247 AFF4Q9UHB7 1163 aaKnown RBP5.83□□□□□ -1.48
PTPN4-210ENST00000485247 YIPF1Q9Y548 306 aa5.83□□□□□ -1.48
PTPN4-210ENST00000485247 PTPRBP23467 1997 aa5.83□□□□□ -1.48
PTPN4-210ENST00000485247 GON4LQ3T8J9 2241 aa5.83□□□□□ -1.48
PTPN4-210ENST00000485247 PIEZO2Q9H5I5 2752 aa5.82□□□□□ -1.48
PTPN4-210ENST00000485247 TEX51A0A1B0GUA7 166 aa5.82□□□□□ -1.48
PTPN4-210ENST00000485247 B8ZZF3 427 aa5.82□□□□□ -1.48
PTPN4-210ENST00000485247 H7C4K7 107 aa5.82□□□□□ -1.48
PTPN4-210ENST00000485247 hCG_1984214I3L0E3 225 aa5.82□□□□□ -1.48
PTPN4-210ENST00000485247 EDIL3O43854 480 aa5.82□□□□□ -1.48
PTPN4-210ENST00000485247 SLC28A2O43868 658 aa5.82□□□□□ -1.48
PTPN4-210ENST00000485247 CBFA2T3O75081 653 aa5.82□□□□□ -1.48
PTPN4-210ENST00000485247 SYPP08247 313 aa5.82□□□□□ -1.48
PTPN4-210ENST00000485247 ATXN1LP0C7T5 689 aaKnown RBP5.82□□□□□ -1.48
PTPN4-210ENST00000485247 GABRR2P28476 465 aa5.82□□□□□ -1.48
PTPN4-210ENST00000485247 GJA4P35212 333 aa5.82□□□□□ -1.48
PTPN4-210ENST00000485247 HOXD12P35452 270 aa5.82□□□□□ -1.48
PTPN4-210ENST00000485247 ETV3P41162 512 aa5.82□□□□□ -1.48
PTPN4-210ENST00000485247 P2RY2P41231 377 aa5.82□□□□□ -1.48
PTPN4-210ENST00000485247 PI4KAP42356 2102 aa5.82□□□□□ -1.48
PTPN4-210ENST00000485247 DPP6P42658 865 aa5.82□□□□□ -1.48
PTPN4-210ENST00000485247 QARSP47897 775 aaKnown RBP5.82□□□□□ -1.48
PTPN4-210ENST00000485247 EPHB3P54753 998 aa5.82□□□□□ -1.48
PTPN4-210ENST00000485247 CYP4F8P98187 520 aa5.82□□□□□ -1.48
PTPN4-210ENST00000485247 SLC14A1Q13336 389 aa5.82□□□□□ -1.48
PTPN4-210ENST00000485247 TFDP1Q14186 410 aa5.82□□□□□ -1.48
PTPN4-210ENST00000485247 MXD4Q14582 209 aaPredicted RBP5.82□□□□□ -1.48
PTPN4-210ENST00000485247 CRY1Q16526 586 aa5.82□□□□□ -1.48
PTPN4-210ENST00000485247 ARHGAP15Q53QZ3 475 aa5.82□□□□□ -1.48
PTPN4-210ENST00000485247 COLEC12Q5KU26 742 aa5.82□□□□□ -1.48
PTPN4-210ENST00000485247 SNAP47Q5SQN1 464 aa5.82□□□□□ -1.48
PTPN4-210ENST00000485247 FYB2Q5VWT5 728 aa5.82□□□□□ -1.48
PTPN4-210ENST00000485247 LMBRD2Q68DH5 695 aaPredicted RBP5.82□□□□□ -1.48
PTPN4-210ENST00000485247 GPR155Q7Z3F1 870 aa5.82□□□□□ -1.48
PTPN4-210ENST00000485247 GLRX5Q86SX6 157 aa5.82□□□□□ -1.48
PTPN4-210ENST00000485247 NOSTRINQ8IVI9 506 aa5.82□□□□□ -1.48
PTPN4-210ENST00000485247 CCDC33Q8N5R6 958 aa5.82□□□□□ -1.48
PTPN4-210ENST00000485247 ZNF713Q8N859 430 aaPredicted RBP5.82□□□□□ -1.48
PTPN4-210ENST00000485247 OLIG1Q8TAK6 271 aa5.82□□□□□ -1.48
PTPN4-210ENST00000485247 GIPC2Q8TF65 315 aa5.82□□□□□ -1.48
PTPN4-210ENST00000485247 CD101Q93033 1021 aa5.82□□□□□ -1.48
PTPN4-210ENST00000485247 UBE2FQ969M7 185 aa5.82□□□□□ -1.48
PTPN4-210ENST00000485247 EXOC4Q96A65 974 aa5.82□□□□□ -1.48
PTPN4-210ENST00000485247 PGLYRP2Q96PD5 576 aa5.82□□□□□ -1.48
PTPN4-210ENST00000485247 KIF2CQ99661 725 aa5.82□□□□□ -1.48
PTPN4-210ENST00000485247 LRRC2Q9BYS8 371 aa5.82□□□□□ -1.48
PTPN4-210ENST00000485247 TASP1Q9H6P5 420 aa5.82□□□□□ -1.48
PTPN4-210ENST00000485247 PRDM16Q9HAZ2 1276 aa5.82□□□□□ -1.48
PTPN4-210ENST00000485247 KIAA1522Q9P206 1035 aaPredicted RBP5.82□□□□□ -1.48
PTPN4-210ENST00000485247 WRAP73Q9P2S5 460 aaPredicted RBP5.82□□□□□ -1.48
PTPN4-210ENST00000485247 GDAQ9Y2T3 454 aa5.82□□□□□ -1.48
PTPN4-210ENST00000485247 ZNF503-AS2A6NEH8 195 aa5.81□□□□□ -1.48
PTPN4-210ENST00000485247 IQCJ-SCHIP1C9J366 451 aaPredicted RBP5.81□□□□□ -1.48
PTPN4-210ENST00000485247 CCER2I3L3R5 266 aa5.81□□□□□ -1.48
PTPN4-210ENST00000485247 RRP8O43159 456 aaKnown RBP5.81□□□□□ -1.48
PTPN4-210ENST00000485247 TLX3O43711 291 aaPredicted RBP5.81□□□□□ -1.48
PTPN4-210ENST00000485247 GJB3O75712 270 aa5.81□□□□□ -1.48
PTPN4-210ENST00000485247 ALDH1A2O94788 518 aa5.81□□□□□ -1.48
PTPN4-210ENST00000485247 HTR3BO95264 441 aa5.81□□□□□ -1.48
PTPN4-210ENST00000485247 ESR1P03372 595 aa5.81□□□□□ -1.48
PTPN4-210ENST00000485247 KRT10P13645 584 aa5.81□□□□□ -1.48
PTPN4-210ENST00000485247 HNRNPLP14866 589 aaKnown RBP eCLIP5.81□□□□□ -1.48
PTPN4-210ENST00000485247 YWHABP31946 246 aaKnown RBP5.81□□□□□ -1.48
PTPN4-210ENST00000485247 MCM5P33992 734 aa5.81□□□□□ -1.48
PTPN4-210ENST00000485247 LIFRP42702 1097 aa5.81□□□□□ -1.48
PTPN4-210ENST00000485247 CXADRP78310 365 aa5.81□□□□□ -1.48
PTPN4-210ENST00000485247 SEMG2Q02383 582 aa5.81□□□□□ -1.48
PTPN4-210ENST00000485247 CYP4A11Q02928 519 aa5.81□□□□□ -1.48
PTPN4-210ENST00000485247 POU5F1BQ06416 359 aa5.81□□□□□ -1.48
PTPN4-210ENST00000485247 ZNF33AQ06730 810 aa5.81□□□□□ -1.48
PTPN4-210ENST00000485247 DUSP4Q13115 394 aa5.81□□□□□ -1.48
PTPN4-210ENST00000485247 CAPSQ13938 189 aa5.81□□□□□ -1.48
PTPN4-210ENST00000485247 MPP2Q14168 576 aa5.81□□□□□ -1.48
PTPN4-210ENST00000485247 PLEKHG6Q3KR16 790 aa5.81□□□□□ -1.48
PTPN4-210ENST00000485247 CCDC157Q569K6 752 aa5.81□□□□□ -1.48
PTPN4-210ENST00000485247 XKR9Q5GH70 373 aa5.81□□□□□ -1.48
PTPN4-210ENST00000485247 SPDYCQ5MJ68 293 aa5.81□□□□□ -1.48
PTPN4-210ENST00000485247 ZNF280DQ6N043 979 aa5.81□□□□□ -1.48
PTPN4-210ENST00000485247 CC2D1AQ6P1N0 951 aaPredicted RBP5.81□□□□□ -1.48
PTPN4-210ENST00000485247 FBXL19Q6PCT2 694 aa5.81□□□□□ -1.48
PTPN4-210ENST00000485247 B3GNT9Q6UX72 402 aa5.81□□□□□ -1.48
PTPN4-210ENST00000485247 SYNE3Q6ZMZ3 975 aa5.81□□□□□ -1.48
PTPN4-210ENST00000485247 REC114Q7Z4M0 266 aa5.81□□□□□ -1.48
PTPN4-210ENST00000485247 DNAJB7Q7Z6W7 309 aaPredicted RBP5.81□□□□□ -1.48
PTPN4-210ENST00000485247 FMNL3Q8IVF7 1028 aa5.81□□□□□ -1.48
PTPN4-210ENST00000485247 SLFN12Q8IYM2 578 aa5.81□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms