RNA–Protein interactions for RNA: ENST00000484799.1

SMC4-215, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2

Gene SMC4, Length 478 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-215ENST00000484799 PCGF6Q9BYE7 350 aa4.93□□□□□ -1.62
SMC4-215ENST00000484799 DKK4Q9UBT3 224 aa4.93□□□□□ -1.62
SMC4-215ENST00000484799 INPPL1O15357 1258 aa4.92□□□□□ -1.62
SMC4-215ENST00000484799 THAP12O43422 761 aa4.92□□□□□ -1.62
SMC4-215ENST00000484799 CCNT2O60583 730 aaKnown RBP4.92□□□□□ -1.62
SMC4-215ENST00000484799 TULP3O75386 442 aa4.92□□□□□ -1.62
SMC4-215ENST00000484799 CRYABP02511 175 aaKnown RBP4.92□□□□□ -1.62
SMC4-215ENST00000484799 PEX2P28328 305 aa4.92□□□□□ -1.62
SMC4-215ENST00000484799 RBL1P28749 1068 aa4.92□□□□□ -1.62
SMC4-215ENST00000484799 CDC25AP30304 524 aa4.92□□□□□ -1.62
SMC4-215ENST00000484799 DGKQP52824 942 aa4.92□□□□□ -1.62
SMC4-215ENST00000484799 FOXG1P55316 489 aaPredicted RBP4.92□□□□□ -1.62
SMC4-215ENST00000484799 PLEKHG6Q3KR16 790 aa4.92□□□□□ -1.62
SMC4-215ENST00000484799 COLCA1Q6ZS62 124 aa4.92□□□□□ -1.62
SMC4-215ENST00000484799 UEVLDQ8IX04 471 aa4.92□□□□□ -1.62
SMC4-215ENST00000484799 PIGKQ92643 395 aa4.92□□□□□ -1.62
SMC4-215ENST00000484799 SNX22Q96L94 193 aa4.92□□□□□ -1.62
SMC4-215ENST00000484799 STRBPQ96SI9 672 aaKnown RBP4.92□□□□□ -1.62
SMC4-215ENST00000484799 NUP62CLQ9H1M0 184 aa4.92□□□□□ -1.62
SMC4-215ENST00000484799 GAR1Q9NY12 217 aaKnown RBP4.92□□□□□ -1.62
SMC4-215ENST00000484799 COL20A1Q9P218 1284 aa4.92□□□□□ -1.62
SMC4-215ENST00000484799 G3BP2Q9UN86 482 aaKnown RBP4.92□□□□□ -1.62
SMC4-215ENST00000484799 SLC27A6Q9Y2P4 619 aa4.92□□□□□ -1.62
SMC4-215ENST00000484799 CD8B2A6NJW9 211 aa4.91□□□□□ -1.62
SMC4-215ENST00000484799 CA12O43570 354 aa4.91□□□□□ -1.62
SMC4-215ENST00000484799 TLR2O60603 784 aa4.91□□□□□ -1.62
SMC4-215ENST00000484799 COQ9O75208 318 aa4.91□□□□□ -1.62
SMC4-215ENST00000484799 ZBED1O96006 694 aa4.91□□□□□ -1.62
SMC4-215ENST00000484799 CTSAP10619 480 aa4.91□□□□□ -1.62
SMC4-215ENST00000484799 DEUP1Q05D60 604 aa4.91□□□□□ -1.62
SMC4-215ENST00000484799 SLC14A1Q13336 389 aa4.91□□□□□ -1.62
SMC4-215ENST00000484799 KPNB1Q14974 876 aaKnown RBP4.91□□□□□ -1.62
SMC4-215ENST00000484799 CLCA4Q14CN2 919 aa4.91□□□□□ -1.62
SMC4-215ENST00000484799 MANEAQ5SRI9 462 aa4.91□□□□□ -1.62
SMC4-215ENST00000484799 LVRNQ6Q4G3 990 aa4.91□□□□□ -1.62
SMC4-215ENST00000484799 ZNF793Q6ZN11 406 aa4.91□□□□□ -1.62
SMC4-215ENST00000484799 SESTD1Q86VW0 696 aa4.91□□□□□ -1.62
SMC4-215ENST00000484799 ZDHHC17Q8IUH5 632 aa4.91□□□□□ -1.62
SMC4-215ENST00000484799 RAVER1Q8IY67 606 aaKnown RBP4.91□□□□□ -1.62
SMC4-215ENST00000484799 SAMD14Q8IZD0 417 aaPredicted RBP4.91□□□□□ -1.62
SMC4-215ENST00000484799 ARFGAP1Q8N6T3 406 aa4.91□□□□□ -1.62
SMC4-215ENST00000484799 ABHD5Q8WTS1 349 aa4.91□□□□□ -1.62
SMC4-215ENST00000484799 PMM1Q92871 262 aa4.91□□□□□ -1.62
SMC4-215ENST00000484799 EDC3Q96F86 508 aaKnown RBP4.91□□□□□ -1.62
SMC4-215ENST00000484799 HEYLQ9NQ87 328 aaPredicted RBP4.91□□□□□ -1.62
SMC4-215ENST00000484799 WWOXQ9NZC7 414 aa4.91□□□□□ -1.62
SMC4-215ENST00000484799 TMOD4Q9NZQ9 345 aa4.91□□□□□ -1.62
SMC4-215ENST00000484799 IPO11Q9UI26 975 aaKnown RBP4.91□□□□□ -1.62
SMC4-215ENST00000484799 ASAP1Q9ULH1 1129 aa4.91□□□□□ -1.62
SMC4-215ENST00000484799 RIMKLBQ9ULI2 386 aa4.91□□□□□ -1.62
SMC4-215ENST00000484799 FZD4Q9ULV1 537 aa4.91□□□□□ -1.62
SMC4-215ENST00000484799 VPS4AQ9UN37 437 aa4.91□□□□□ -1.62
SMC4-215ENST00000484799 THRAP3Q9Y2W1 955 aaKnown RBP4.91□□□□□ -1.62
SMC4-215ENST00000484799 FAM90A10PA6NDY2 464 aa4.9□□□□□ -1.63
SMC4-215ENST00000484799 VSTM5A8MXK1 200 aa4.9□□□□□ -1.63
SMC4-215ENST00000484799 KCNAB3O43448 404 aa4.9□□□□□ -1.63
SMC4-215ENST00000484799 OAZ2O95190 189 aa4.9□□□□□ -1.63
SMC4-215ENST00000484799 SYF2O95926 243 aaKnown RBP4.9□□□□□ -1.63
SMC4-215ENST00000484799 MT-ND5P03915 603 aa4.9□□□□□ -1.63
SMC4-215ENST00000484799 TMIGD3P0DMS9 266 aaPredicted RBP4.9□□□□□ -1.63
SMC4-215ENST00000484799 MCM5P33992 734 aa4.9□□□□□ -1.63
SMC4-215ENST00000484799 IL6STP40189 918 aaPredicted RBP4.9□□□□□ -1.63
SMC4-215ENST00000484799 YPEL5P62699 121 aa4.9□□□□□ -1.63
SMC4-215ENST00000484799 CNGA3Q16281 694 aa4.9□□□□□ -1.63
SMC4-215ENST00000484799 TRIM71Q2Q1W2 868 aaKnown RBP4.9□□□□□ -1.63
SMC4-215ENST00000484799 USP49Q70CQ1 688 aa4.9□□□□□ -1.63
SMC4-215ENST00000484799 NOL8Q76FK4 1167 aaKnown RBP4.9□□□□□ -1.63
SMC4-215ENST00000484799 METTL25Q8N6Q8 603 aa4.9□□□□□ -1.63
SMC4-215ENST00000484799 LINC01465Q8N7H1 131 aa4.9□□□□□ -1.63
SMC4-215ENST00000484799 ZDHHC12Q96GR4 267 aa4.9□□□□□ -1.63
SMC4-215ENST00000484799 WDYHV1Q96HA8 205 aa4.9□□□□□ -1.63
SMC4-215ENST00000484799 EIF3CQ99613 913 aaKnown RBP4.9□□□□□ -1.63
SMC4-215ENST00000484799 SCNM1Q9BWG6 230 aa4.9□□□□□ -1.63
SMC4-215ENST00000484799 SLC25A32Q9H2D1 315 aa4.9□□□□□ -1.63
SMC4-215ENST00000484799 PNPLA8Q9NP80 782 aa4.9□□□□□ -1.63
SMC4-215ENST00000484799 PRDM11Q9NQV5 511 aa4.9□□□□□ -1.63
SMC4-215ENST00000484799 KLHL42Q9P2K6 505 aa4.9□□□□□ -1.63
SMC4-215ENST00000484799 IGKV2D-30A0A075B6S6 120 aa4.89□□□□□ -1.63
SMC4-215ENST00000484799 AGPSO00116 658 aa4.89□□□□□ -1.63
SMC4-215ENST00000484799 FOXN3O00409 490 aaPredicted RBP4.89□□□□□ -1.63
SMC4-215ENST00000484799 TPP1O14773 563 aa4.89□□□□□ -1.63
SMC4-215ENST00000484799 ZC3H11AO75152 810 aaKnown RBP eCLIP4.89□□□□□ -1.63
SMC4-215ENST00000484799 WDR47O94967 919 aa4.89□□□□□ -1.63
SMC4-215ENST00000484799 HRGP04196 525 aa4.89□□□□□ -1.63
SMC4-215ENST00000484799 IDEP14735 1019 aa4.89□□□□□ -1.63
SMC4-215ENST00000484799 VPS41P49754 854 aa4.89□□□□□ -1.63
SMC4-215ENST00000484799 SLC12A2P55011 1212 aa4.89□□□□□ -1.63
SMC4-215ENST00000484799 GPC5P78333 572 aa4.89□□□□□ -1.63
SMC4-215ENST00000484799 MTA1Q13330 715 aa4.89□□□□□ -1.63
SMC4-215ENST00000484799 RAPGEF1Q13905 1077 aa4.89□□□□□ -1.63
SMC4-215ENST00000484799 HSP90AB2PQ58FF8 381 aa4.89□□□□□ -1.63
SMC4-215ENST00000484799 MANEALQ5VSG8 457 aa4.89□□□□□ -1.63
SMC4-215ENST00000484799 DAB2IPQ5VWQ8 1189 aa4.89□□□□□ -1.63
SMC4-215ENST00000484799 DEF8Q6ZN54 512 aa4.89□□□□□ -1.63
SMC4-215ENST00000484799 UBE2Q1Q7Z7E8 422 aa4.89□□□□□ -1.63
SMC4-215ENST00000484799 ADGRF4Q8IZF3 695 aa4.89□□□□□ -1.63
SMC4-215ENST00000484799 GADD45GIP1Q8TAE8 222 aaPredicted RBP4.89□□□□□ -1.63
SMC4-215ENST00000484799 MPLKIPQ8TAP9 179 aa4.89□□□□□ -1.63
SMC4-215ENST00000484799 IQCDQ96DY2 449 aa4.89□□□□□ -1.63
SMC4-215ENST00000484799 BRIP1Q9BX63 1249 aa4.89□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms