RNA–Protein interactions for RNA: ENST00000484087.5

BRCA1-216, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5

Gene BRCA1, Length 1,495 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-216ENST00000484087 OLIG1Q8TAK6 271 aa7.29□□□□□ -1.24
BRCA1-216ENST00000484087 ZNF564Q8TBZ8 553 aaPredicted RBP7.29□□□□□ -1.24
BRCA1-216ENST00000484087 HDAC7Q8WUI4 952 aa7.29□□□□□ -1.24
BRCA1-216ENST00000484087 ACSF2Q96CM8 615 aaPredicted RBP7.29□□□□□ -1.24
BRCA1-216ENST00000484087 ARHGEF26Q96DR7 871 aa7.29□□□□□ -1.24
BRCA1-216ENST00000484087 HES6Q96HZ4 224 aa7.29□□□□□ -1.24
BRCA1-216ENST00000484087 VCPIP1Q96JH7 1222 aa7.29□□□□□ -1.24
BRCA1-216ENST00000484087 PCDHB18PQ96TA0 734 aa7.29□□□□□ -1.24
BRCA1-216ENST00000484087 NUP85Q9BW27 656 aa7.29□□□□□ -1.24
BRCA1-216ENST00000484087 SMG9Q9H0W8 520 aaKnown RBP7.29□□□□□ -1.24
BRCA1-216ENST00000484087 CARD9Q9H257 536 aa7.29□□□□□ -1.24
BRCA1-216ENST00000484087 CYP3A43Q9HB55 503 aa7.29□□□□□ -1.24
BRCA1-216ENST00000484087 CRTAC1Q9NQ79 661 aa7.29□□□□□ -1.24
BRCA1-216ENST00000484087 AVENQ9NQS1 362 aaPredicted RBP7.29□□□□□ -1.24
BRCA1-216ENST00000484087 CISHQ9NSE2 258 aa7.29□□□□□ -1.24
BRCA1-216ENST00000484087 LCMT1Q9UIC8 334 aa7.29□□□□□ -1.24
BRCA1-216ENST00000484087 RAB21Q9UL25 225 aa7.29□□□□□ -1.24
BRCA1-216ENST00000484087 CA14Q9ULX7 337 aa7.29□□□□□ -1.24
BRCA1-216ENST00000484087 PACSIN2Q9UNF0 486 aaPredicted RBP7.29□□□□□ -1.24
BRCA1-216ENST00000484087 SORCS3Q9UPU3 1222 aa7.29□□□□□ -1.24
BRCA1-216ENST00000484087 MRPS23Q9Y3D9 190 aaKnown RBP7.29□□□□□ -1.24
BRCA1-216ENST00000484087 SCINQ9Y6U3 715 aa7.29□□□□□ -1.24
BRCA1-216ENST00000484087 HELZP42694 1942 aaKnown RBP7.28□□□□□ -1.24
BRCA1-216ENST00000484087 MUC6Q6W4X9 2439 aa7.28□□□□□ -1.24
BRCA1-216ENST00000484087 OR6C75A6NL08 312 aa7.28□□□□□ -1.24
BRCA1-216ENST00000484087 CCDC188H7C350 402 aa7.28□□□□□ -1.24
BRCA1-216ENST00000484087 MYO1FO00160 1098 aa7.28□□□□□ -1.24
BRCA1-216ENST00000484087 CLDN5O00501 218 aa7.28□□□□□ -1.24
BRCA1-216ENST00000484087 SPOPO43791 374 aa7.28□□□□□ -1.24
BRCA1-216ENST00000484087 GPR37L1O60883 481 aa7.28□□□□□ -1.24
BRCA1-216ENST00000484087 HUS1O60921 280 aa7.28□□□□□ -1.24
BRCA1-216ENST00000484087 PAPLNO95428 1278 aa7.28□□□□□ -1.24
BRCA1-216ENST00000484087 STAU1O95793 577 aaKnown RBP7.28□□□□□ -1.24
BRCA1-216ENST00000484087 CYP1A1P04798 512 aaPredicted RBP7.28□□□□□ -1.24
BRCA1-216ENST00000484087 CALB1P05937 261 aa7.28□□□□□ -1.24
BRCA1-216ENST00000484087 PAEPP09466 180 aa7.28□□□□□ -1.24
BRCA1-216ENST00000484087 FCARP24071 287 aa7.28□□□□□ -1.24
BRCA1-216ENST00000484087 HOXA9P31269 272 aa7.28□□□□□ -1.24
BRCA1-216ENST00000484087 VIPR2P41587 438 aa7.28□□□□□ -1.24
BRCA1-216ENST00000484087 CENPCQ03188 943 aa7.28□□□□□ -1.24
BRCA1-216ENST00000484087 C2orf54Q08AI8 447 aa7.28□□□□□ -1.24
BRCA1-216ENST00000484087 SIGLEC14Q08ET2 396 aa7.28□□□□□ -1.24
BRCA1-216ENST00000484087 GPS2Q13227 327 aa7.28□□□□□ -1.24
BRCA1-216ENST00000484087 MESDQ14696 234 aa7.28□□□□□ -1.24
BRCA1-216ENST00000484087 DDR2Q16832 855 aa7.28□□□□□ -1.24
BRCA1-216ENST00000484087 WDR72Q3MJ13 1102 aa7.28□□□□□ -1.24
BRCA1-216ENST00000484087 INTS6LQ5JSJ4 861 aaKnown RBP7.28□□□□□ -1.24
BRCA1-216ENST00000484087 NAA35Q5VZE5 725 aa7.28□□□□□ -1.24
BRCA1-216ENST00000484087 TPGS2Q68CL5 300 aa7.28□□□□□ -1.24
BRCA1-216ENST00000484087 WDR93Q6P2C0 686 aa7.28□□□□□ -1.24
BRCA1-216ENST00000484087 ELMSAN1Q6PJG2 1045 aa7.28□□□□□ -1.24
BRCA1-216ENST00000484087 PDZD4Q76G19 769 aaPredicted RBP7.28□□□□□ -1.24
BRCA1-216ENST00000484087 METTL23Q86XA0 190 aa7.28□□□□□ -1.24
BRCA1-216ENST00000484087 LRRC52Q8N7C0 313 aa7.28□□□□□ -1.24
BRCA1-216ENST00000484087 NOA1Q8NC60 698 aaKnown RBP7.28□□□□□ -1.24
BRCA1-216ENST00000484087 SHKBP1Q8TBC3 707 aa7.28□□□□□ -1.24
BRCA1-216ENST00000484087 ACTRT1Q8TDG2 376 aa7.28□□□□□ -1.24
BRCA1-216ENST00000484087 HNRNPLLQ8WVV9 542 aaKnown RBP7.28□□□□□ -1.24
BRCA1-216ENST00000484087 ZNF606Q8WXB4 792 aa7.28□□□□□ -1.24
BRCA1-216ENST00000484087 MYLPFQ96A32 169 aa7.28□□□□□ -1.24
BRCA1-216ENST00000484087 RSPRY1Q96DX4 576 aa7.28□□□□□ -1.24
BRCA1-216ENST00000484087 PKMYT1Q99640 499 aa7.28□□□□□ -1.24
BRCA1-216ENST00000484087 SYT15Q9BQS2 421 aa7.28□□□□□ -1.24
BRCA1-216ENST00000484087 C1QTNF1Q9BXJ1 281 aa7.28□□□□□ -1.24
BRCA1-216ENST00000484087 LRRC3Q9BY71 257 aa7.28□□□□□ -1.24
BRCA1-216ENST00000484087 XYLT2Q9H1B5 865 aa7.28□□□□□ -1.24
BRCA1-216ENST00000484087 ACBD3Q9H3P7 528 aa7.28□□□□□ -1.24
BRCA1-216ENST00000484087 VRTNQ9H8Y1 702 aa7.28□□□□□ -1.24
BRCA1-216ENST00000484087 ANKZF1Q9H8Y5 726 aa7.28□□□□□ -1.24
BRCA1-216ENST00000484087 ABCB6Q9NP58 842 aa7.28□□□□□ -1.24
BRCA1-216ENST00000484087 ACP6Q9NPH0 428 aa7.28□□□□□ -1.24
BRCA1-216ENST00000484087 TMEM30AQ9NV96 361 aa7.28□□□□□ -1.24
BRCA1-216ENST00000484087 ADAM22Q9P0K1 906 aa7.28□□□□□ -1.24
BRCA1-216ENST00000484087 EPS15L1Q9UBC2 864 aa7.28□□□□□ -1.24
BRCA1-216ENST00000484087 DPP7Q9UHL4 492 aa7.28□□□□□ -1.24
BRCA1-216ENST00000484087 CDH7Q9ULB5 785 aa7.28□□□□□ -1.24
BRCA1-216ENST00000484087 MAGED2Q9UNF1 606 aaPredicted RBP7.28□□□□□ -1.24
BRCA1-216ENST00000484087 USTQ9Y2C2 406 aa7.28□□□□□ -1.24
BRCA1-216ENST00000484087 SBDSQ9Y3A5 250 aaKnown RBP eCLIP7.28□□□□□ -1.24
BRCA1-216ENST00000484087 ALG6Q9Y672 507 aa7.28□□□□□ -1.24
BRCA1-216ENST00000484087 PATJQ8NI35 1801 aa7.28□□□□□ -1.24
BRCA1-216ENST00000484087 MIA3Q5JRA6 1907 aa7.28□□□□□ -1.24
BRCA1-216ENST00000484087 CCDC66A2RUB6 948 aa7.27□□□□□ -1.25
BRCA1-216ENST00000484087 KRBA1A5PL33 1030 aa7.27□□□□□ -1.25
BRCA1-216ENST00000484087 TMEM110-MUSTN1A8MSY1 372 aa7.27□□□□□ -1.25
BRCA1-216ENST00000484087 PRR33A8MZF0 331 aa7.27□□□□□ -1.25
BRCA1-216ENST00000484087 PDE2AO00408 941 aaPredicted RBP7.27□□□□□ -1.25
BRCA1-216ENST00000484087 PI15O43692 258 aa7.27□□□□□ -1.25
BRCA1-216ENST00000484087 CD19P15391 556 aa7.27□□□□□ -1.25
BRCA1-216ENST00000484087 PTPN2P17706 415 aa7.27□□□□□ -1.25
BRCA1-216ENST00000484087 CD72P21854 359 aa7.27□□□□□ -1.25
BRCA1-216ENST00000484087 GABRR2P28476 465 aa7.27□□□□□ -1.25
BRCA1-216ENST00000484087 PNPLA4P41247 253 aa7.27□□□□□ -1.25
BRCA1-216ENST00000484087 SLC1A1P43005 524 aa7.27□□□□□ -1.25
BRCA1-216ENST00000484087 ZNF132P52740 706 aa7.27□□□□□ -1.25
BRCA1-216ENST00000484087 NOMO3P69849 1222 aa7.27□□□□□ -1.25
BRCA1-216ENST00000484087 IFRD2Q12894 506 aaPredicted RBP7.27□□□□□ -1.25
BRCA1-216ENST00000484087 TDGQ13569 410 aa7.27□□□□□ -1.25
BRCA1-216ENST00000484087 ZNF394Q53GI3 561 aa7.27□□□□□ -1.25
BRCA1-216ENST00000484087 MDH1BQ5I0G3 518 aa7.27□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms