RNA–Protein interactions for RNA: ENST00000483495.5

CPNE1-225, Transcript of copine 1, humanhuman

TSL 5

Gene CPNE1, Length 1,853 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-225ENST00000483495 TMEM189-UBE2V1I3L0A0 370 aa13.77□□□□□ -0.21
CPNE1-225ENST00000483495 NRP1O14786 923 aa13.77□□□□□ -0.21
CPNE1-225ENST00000483495 EIF3HO15372 352 aaKnown RBP eCLIP13.77□□□□□ -0.211e-6■■□□□ 11.9
CPNE1-225ENST00000483495 FYNP06241 537 aa13.77□□□□□ -0.21
CPNE1-225ENST00000483495 CDK7P50613 346 aa13.77□□□□□ -0.21
CPNE1-225ENST00000483495 PPP2R2AP63151 447 aa13.77□□□□□ -0.21
CPNE1-225ENST00000483495 GNGT1P63211 74 aa13.77□□□□□ -0.21
CPNE1-225ENST00000483495 PAN2Q504Q3 1202 aaKnown RBP13.77□□□□□ -0.21
CPNE1-225ENST00000483495 CLLU1OSQ5K130 101 aa13.77□□□□□ -0.21
CPNE1-225ENST00000483495 DARS2Q6PI48 645 aaKnown RBP13.77□□□□□ -0.21
CPNE1-225ENST00000483495 LEKR1Q6ZMV7 388 aa13.77□□□□□ -0.21
CPNE1-225ENST00000483495 GPRIN1Q7Z2K8 1008 aa13.77□□□□□ -0.21
CPNE1-225ENST00000483495 SCML4Q8N228 414 aa13.77□□□□□ -0.21
CPNE1-225ENST00000483495 EPS8L3Q8TE67 593 aaKnown RBP13.77□□□□□ -0.21
CPNE1-225ENST00000483495 TTC25Q96NG3 672 aa13.77□□□□□ -0.21
CPNE1-225ENST00000483495 SERPINB12Q96P63 405 aa13.77□□□□□ -0.21
CPNE1-225ENST00000483495 CSPG4P5Q96PW8 444 aa13.77□□□□□ -0.21
CPNE1-225ENST00000483495 SLC9A7Q96T83 725 aa13.77□□□□□ -0.21
CPNE1-225ENST00000483495 FTHL17Q9BXU8 183 aa13.77□□□□□ -0.21
CPNE1-225ENST00000483495 DHX35Q9H5Z1 703 aaKnown RBP13.77□□□□□ -0.21
CPNE1-225ENST00000483495 FRMPD3Q5JV73 1810 aa13.77□□□□□ -0.21
CPNE1-225ENST00000483495 ALOX15BO15296 676 aa13.76□□□□□ -0.21
CPNE1-225ENST00000483495 RGS16O15492 202 aaPredicted RBP13.76□□□□□ -0.21
CPNE1-225ENST00000483495 ITGB1P05556 798 aa13.76□□□□□ -0.21
CPNE1-225ENST00000483495 COL6A1P12109 1028 aa13.76□□□□□ -0.21
CPNE1-225ENST00000483495 HPDP32754 393 aaPredicted RBP13.76□□□□□ -0.21
CPNE1-225ENST00000483495 RDXP35241 583 aaKnown RBP13.76□□□□□ -0.21
CPNE1-225ENST00000483495 MDH1P40925 334 aaKnown RBP13.76□□□□□ -0.21
CPNE1-225ENST00000483495 NR2C2P49116 596 aa13.76□□□□□ -0.21
CPNE1-225ENST00000483495 XRCC4Q13426 336 aa13.76□□□□□ -0.21
CPNE1-225ENST00000483495 AUHQ13825 339 aaKnown RBP13.76□□□□□ -0.21
CPNE1-225ENST00000483495 MAPRE1Q15691 268 aaKnown RBP13.76□□□□□ -0.21
CPNE1-225ENST00000483495 PPP6R3Q5H9R7 873 aaPredicted RBP13.76□□□□□ -0.21
CPNE1-225ENST00000483495 OVOS1Q6IE37 1185 aa13.76□□□□□ -0.21
CPNE1-225ENST00000483495 C1orf228Q6PIY5 440 aa13.76□□□□□ -0.21
CPNE1-225ENST00000483495 LRRC31Q6UY01 552 aa13.76□□□□□ -0.21
CPNE1-225ENST00000483495 FAM43BQ6ZT52 329 aaPredicted RBP13.76□□□□□ -0.21
CPNE1-225ENST00000483495 HFE2Q6ZVN8 426 aa13.76□□□□□ -0.21
CPNE1-225ENST00000483495 BHLHA9Q7RTU4 235 aa13.76□□□□□ -0.21
CPNE1-225ENST00000483495 ZC3H18Q86VM9 953 aaKnown RBP13.76□□□□□ -0.21
CPNE1-225ENST00000483495 OR10T2Q8NGX3 314 aa13.76□□□□□ -0.21
CPNE1-225ENST00000483495 UHMK1Q8TAS1 419 aaKnown RBP13.76□□□□□ -0.21
CPNE1-225ENST00000483495 PGAP3Q96FM1 320 aaPredicted RBP13.76□□□□□ -0.21
CPNE1-225ENST00000483495 STMN4Q9H169 189 aaPredicted RBP13.76□□□□□ -0.21
CPNE1-225ENST00000483495 PNPLA8Q9NP80 782 aa13.76□□□□□ -0.21
CPNE1-225ENST00000483495 SAGE1Q9NXZ1 904 aa13.76□□□□□ -0.21
CPNE1-225ENST00000483495 PCDHB8Q9UN66 801 aa13.76□□□□□ -0.21
CPNE1-225ENST00000483495 COL4A4P53420 1690 aaPredicted RBP13.76□□□□□ -0.21
CPNE1-225ENST00000483495 TLDC2A0PJX2 215 aa13.76□□□□□ -0.21
CPNE1-225ENST00000483495 SRRM3A6NNA2 597 aaPredicted RBP13.76□□□□□ -0.21
CPNE1-225ENST00000483495 YJEFN3A6XGL0 299 aa13.76□□□□□ -0.21
CPNE1-225ENST00000483495 KBTBD13C9JR72 458 aa13.76□□□□□ -0.21
CPNE1-225ENST00000483495 E7ENQ6 273 aa13.76□□□□□ -0.21
CPNE1-225ENST00000483495 H7C0C1 242 aa13.76□□□□□ -0.21
CPNE1-225ENST00000483495 B4GALT3O60512 393 aa13.76□□□□□ -0.21
CPNE1-225ENST00000483495 ZBED1O96006 694 aa13.76□□□□□ -0.21
CPNE1-225ENST00000483495 SELPP16109 830 aa13.76□□□□□ -0.21
CPNE1-225ENST00000483495 IBSPP21815 317 aaPredicted RBP13.76□□□□□ -0.21
CPNE1-225ENST00000483495 ATP5OP48047 213 aa13.76□□□□□ -0.21
CPNE1-225ENST00000483495 AIF1P55008 147 aa13.76□□□□□ -0.21
CPNE1-225ENST00000483495 PITX1P78337 314 aaPredicted RBP13.76□□□□□ -0.21
CPNE1-225ENST00000483495 CBLBQ13191 982 aa13.76□□□□□ -0.21
CPNE1-225ENST00000483495 NOMO2Q5JPE7 1267 aa13.76□□□□□ -0.21
CPNE1-225ENST00000483495 SYPL2Q5VXT5 272 aa13.76□□□□□ -0.21
CPNE1-225ENST00000483495 PM20D1Q6GTS8 502 aa13.76□□□□□ -0.21
CPNE1-225ENST00000483495 CENPUQ71F23 418 aa13.76□□□□□ -0.21
CPNE1-225ENST00000483495 LRRC8DQ7L1W4 858 aa13.76□□□□□ -0.21
CPNE1-225ENST00000483495 FAM131BQ86XD5 332 aa13.76□□□□□ -0.21
CPNE1-225ENST00000483495 COLGALT2Q8IYK4 626 aa13.76□□□□□ -0.21
CPNE1-225ENST00000483495 THEM5Q8N1Q8 247 aa13.76□□□□□ -0.21
CPNE1-225ENST00000483495 IRGQQ8WZA9 623 aa13.76□□□□□ -0.21
CPNE1-225ENST00000483495 XRN2Q9H0D6 950 aaKnown RBP eCLIP13.76□□□□□ -0.21
CPNE1-225ENST00000483495 SAYSD1Q9NPB0 183 aa13.76□□□□□ -0.21
CPNE1-225ENST00000483495 RRN3Q9NYV6 651 aa13.76□□□□□ -0.21
CPNE1-225ENST00000483495 CWC15Q9P013 229 aaKnown RBP13.76□□□□□ -0.21
CPNE1-225ENST00000483495 KANSL3Q9P2N6 904 aa13.76□□□□□ -0.21
CPNE1-225ENST00000483495 TDRD15B5MCY1 1934 aaKnown RBP13.75□□□□□ -0.21
CPNE1-225ENST00000483495 E7ESA3 106 aa13.75□□□□□ -0.21
CPNE1-225ENST00000483495 M0QYT0 321 aa13.75□□□□□ -0.21
CPNE1-225ENST00000483495 DDHD2O94830 711 aa13.75□□□□□ -0.21
CPNE1-225ENST00000483495 STAT4Q14765 748 aa13.75□□□□□ -0.21
CPNE1-225ENST00000483495 ANKRD22Q5VYY1 191 aa13.75□□□□□ -0.21
CPNE1-225ENST00000483495 LRRTM3Q86VH5 581 aa13.75□□□□□ -0.21
CPNE1-225ENST00000483495 ZNF280BQ86YH2 543 aa13.75□□□□□ -0.21
CPNE1-225ENST00000483495 URGCPQ8TCY9 931 aa13.75□□□□□ -0.21
CPNE1-225ENST00000483495 HASPINQ8TF76 798 aa13.75□□□□□ -0.21
CPNE1-225ENST00000483495 NTAN1Q96AB6 310 aa13.75□□□□□ -0.21
CPNE1-225ENST00000483495 C9orf72Q96LT7 481 aa13.75□□□□□ -0.21
CPNE1-225ENST00000483495 MAGEB5Q9BZ81 275 aa13.75□□□□□ -0.21
CPNE1-225ENST00000483495 ELAC1Q9H777 363 aaKnown RBP13.75□□□□□ -0.21
CPNE1-225ENST00000483495 CNOT10Q9H9A5 744 aaKnown RBP13.75□□□□□ -0.21
CPNE1-225ENST00000483495 DMAP1Q9NPF5 467 aaPredicted RBP13.75□□□□□ -0.21
CPNE1-225ENST00000483495 TMLHEQ9NVH6 421 aa13.75□□□□□ -0.21
CPNE1-225ENST00000483495 PAK5Q9P286 719 aa13.75□□□□□ -0.21
CPNE1-225ENST00000483495 NAALADL1Q9UQQ1 740 aa13.75□□□□□ -0.21
CPNE1-225ENST00000483495 HEY1Q9Y5J3 304 aa13.75□□□□□ -0.21
CPNE1-225ENST00000483495 ERICH4A6NGS2 130 aa13.74□□□□□ -0.21
CPNE1-225ENST00000483495 DNM1LO00429 736 aa13.74□□□□□ -0.21
CPNE1-225ENST00000483495 LTFP02788 710 aa13.74□□□□□ -0.21
CPNE1-225ENST00000483495 USP17L7P0C7H9 530 aa13.74□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms