RNA–Protein interactions for RNA: ENST00000482541.2

CCNC-204, Transcript of cyclin C, humanhuman

TSL 1 (best) BASIC

Gene CCNC, Length 1,704 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNC-204ENST00000482541 HEXIM2Q96MH2 286 aaKnown RBP8.17□□□□□ -1.1
CCNC-204ENST00000482541 PNKPQ96T60 521 aa8.17□□□□□ -1.1
CCNC-204ENST00000482541 METTL14Q9HCE5 456 aaKnown RBP8.17□□□□□ -1.1
CCNC-204ENST00000482541 UTP3Q9NQZ2 479 aaKnown RBP eCLIP8.17□□□□□ -1.13e-11■■■■■ 99.4
CCNC-204ENST00000482541 CISHQ9NSE2 258 aa8.17□□□□□ -1.1
CCNC-204ENST00000482541 ARMCX3Q9UH62 379 aaPredicted RBP8.17□□□□□ -1.1
CCNC-204ENST00000482541 USP3Q9Y6I4 520 aa8.17□□□□□ -1.1
CCNC-204ENST00000482541 ATG2BQ96BY7 2078 aa8.17□□□□□ -1.1
CCNC-204ENST00000482541 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP8.17□□□□□ -1.1
CCNC-204ENST00000482541 PALM2-AKAP2B1ALY0 433 aaPredicted RBP8.17□□□□□ -1.1
CCNC-204ENST00000482541 AXIN1O15169 862 aa8.17□□□□□ -1.1
CCNC-204ENST00000482541 PMM2O15305 246 aa8.17□□□□□ -1.1
CCNC-204ENST00000482541 RPP40O75818 363 aaKnown RBP8.17□□□□□ -1.1
CCNC-204ENST00000482541 ADH5P11766 374 aa8.17□□□□□ -1.1
CCNC-204ENST00000482541 TNFRSF4P43489 277 aa8.17□□□□□ -1.1
CCNC-204ENST00000482541 PLA2G4AP47712 749 aa8.17□□□□□ -1.1
CCNC-204ENST00000482541 KIF11P52732 1056 aa8.17□□□□□ -1.1
CCNC-204ENST00000482541 PMS1P54277 932 aaKnown RBP8.17□□□□□ -1.1
CCNC-204ENST00000482541 GOLGA8FQ08AF8 430 aa8.17□□□□□ -1.1
CCNC-204ENST00000482541 GOLGA8DPQ0D2H9 430 aa8.17□□□□□ -1.1
CCNC-204ENST00000482541 SPEM2Q0P670 501 aa8.17□□□□□ -1.1
CCNC-204ENST00000482541 SRSF5Q13243 272 aaKnown RBP8.17□□□□□ -1.1
CCNC-204ENST00000482541 CSRP2Q16527 193 aa8.17□□□□□ -1.1
CCNC-204ENST00000482541 LPAL2Q16609 132 aa8.17□□□□□ -1.1
CCNC-204ENST00000482541 ZNF394Q53GI3 561 aa8.17□□□□□ -1.1
CCNC-204ENST00000482541 LY6G5CQ5SRR4 150 aa8.17□□□□□ -1.1
CCNC-204ENST00000482541 TCERG1LQ5VWI1 586 aa8.17□□□□□ -1.1
CCNC-204ENST00000482541 BTBD8Q5XKL5 378 aa8.17□□□□□ -1.1
CCNC-204ENST00000482541 FOXR2Q6PJQ5 311 aa8.17□□□□□ -1.1
CCNC-204ENST00000482541 CACNA2D4Q7Z3S7 1137 aa8.17□□□□□ -1.1
CCNC-204ENST00000482541 TADA2BQ86TJ2 420 aa8.17□□□□□ -1.1
CCNC-204ENST00000482541 KLF16Q9BXK1 252 aaPredicted RBP8.17□□□□□ -1.1
CCNC-204ENST00000482541 SPHK2Q9NRA0 654 aa8.17□□□□□ -1.1
CCNC-204ENST00000482541 USP18Q9UMW8 372 aa8.17□□□□□ -1.1
CCNC-204ENST00000482541 OTOGLQ3ZCN5 2332 aa8.16□□□□□ -1.1
CCNC-204ENST00000482541 MYO15AQ9UKN7 3530 aa8.16□□□□□ -1.1
CCNC-204ENST00000482541 HOXC11O43248 304 aaPredicted RBP8.16□□□□□ -1.1
CCNC-204ENST00000482541 KAT7O95251 611 aa8.16□□□□□ -1.1
CCNC-204ENST00000482541 APBB3O95704 486 aa8.16□□□□□ -1.1
CCNC-204ENST00000482541 APODP05090 189 aa8.16□□□□□ -1.1
CCNC-204ENST00000482541 CCDC192P0DO97 292 aa8.16□□□□□ -1.1
CCNC-204ENST00000482541 HOXC13P31276 330 aa8.16□□□□□ -1.1
CCNC-204ENST00000482541 GRIA2P42262 883 aa8.16□□□□□ -1.1
CCNC-204ENST00000482541 SLC6A11P48066 632 aa8.16□□□□□ -1.1
CCNC-204ENST00000482541 PXNP49023 591 aaPredicted RBP8.16□□□□□ -1.1
CCNC-204ENST00000482541 PGFP49763 221 aa8.16□□□□□ -1.1
CCNC-204ENST00000482541 RAD23BP54727 409 aa8.16□□□□□ -1.1
CCNC-204ENST00000482541 SLC8A3P57103 927 aa8.16□□□□□ -1.1
CCNC-204ENST00000482541 YWHAEP62258 255 aaKnown RBP8.16□□□□□ -1.1
CCNC-204ENST00000482541 CRY1Q16526 586 aa8.16□□□□□ -1.1
CCNC-204ENST00000482541 RSPO4Q2I0M5 234 aaPredicted RBP8.16□□□□□ -1.1
CCNC-204ENST00000482541 CBWD6Q4V339 395 aa8.16□□□□□ -1.1
CCNC-204ENST00000482541 C2orf27AQ580R0 203 aa8.16□□□□□ -1.1
CCNC-204ENST00000482541 DCAF17Q5H9S7 520 aaPredicted RBP8.16□□□□□ -1.1
CCNC-204ENST00000482541 CBWD3Q5JTY5 395 aa8.16□□□□□ -1.1
CCNC-204ENST00000482541 CBWD5Q5RIA9 395 aa8.16□□□□□ -1.1
CCNC-204ENST00000482541 ARHGAP17Q68EM7 881 aa8.16□□□□□ -1.1
CCNC-204ENST00000482541 GPRIN1Q7Z2K8 1008 aa8.16□□□□□ -1.1
CCNC-204ENST00000482541 DGLUCYQ7Z3D6 616 aa8.16□□□□□ -1.1
CCNC-204ENST00000482541 CCDC186Q7Z3E2 898 aa8.16□□□□□ -1.1
CCNC-204ENST00000482541 BBS7Q8IWZ6 715 aa8.16□□□□□ -1.1
CCNC-204ENST00000482541 ANKRD52Q8NB46 1076 aa8.16□□□□□ -1.1
CCNC-204ENST00000482541 SLC4A11Q8NBS3 891 aa8.16□□□□□ -1.1
CCNC-204ENST00000482541 ERCC4Q92889 916 aaPredicted RBP8.16□□□□□ -1.1
CCNC-204ENST00000482541 SLC35C1Q96A29 364 aa8.16□□□□□ -1.1
CCNC-204ENST00000482541 CEP63Q96MT8 703 aa8.16□□□□□ -1.1
CCNC-204ENST00000482541 CDK5RAP1Q96SZ6 601 aaKnown RBP8.16□□□□□ -1.1
CCNC-204ENST00000482541 OCSTAMPQ9BR26 566 aa8.16□□□□□ -1.1
CCNC-204ENST00000482541 PARD6AQ9NPB6 346 aa8.16□□□□□ -1.1
CCNC-204ENST00000482541 SEMA4GQ9NTN9 838 aa8.16□□□□□ -1.1
CCNC-204ENST00000482541 MTPAPQ9NVV4 582 aaKnown RBP eCLIP8.16□□□□□ -1.1
CCNC-204ENST00000482541 CLIC5Q9NZA1 410 aa8.16□□□□□ -1.1
CCNC-204ENST00000482541 DNMT3LQ9UJW3 386 aa8.16□□□□□ -1.1
CCNC-204ENST00000482541 LSM7Q9UK45 103 aaKnown RBP8.16□□□□□ -1.1
CCNC-204ENST00000482541 KIAA1257Q9ULG3 409 aa8.16□□□□□ -1.1
CCNC-204ENST00000482541 MMP17Q9ULZ9 603 aa8.16□□□□□ -1.1
CCNC-204ENST00000482541 GPSM3Q9Y4H4 160 aa8.16□□□□□ -1.1
CCNC-204ENST00000482541 MYO16Q9Y6X6 1858 aa8.16□□□□□ -1.1
CCNC-204ENST00000482541 BICDL2A1A5D9 508 aa8.15□□□□□ -1.1
CCNC-204ENST00000482541 TRIM49BA6NDI0 452 aa8.15□□□□□ -1.1
CCNC-204ENST00000482541 GREM1O60565 184 aa8.15□□□□□ -1.1
CCNC-204ENST00000482541 TBX18O95935 607 aa8.15□□□□□ -1.1
CCNC-204ENST00000482541 RALAP11233 206 aa8.15□□□□□ -1.1
CCNC-204ENST00000482541 RARGP13631 454 aa8.15□□□□□ -1.1
CCNC-204ENST00000482541 TBXAS1P24557 533 aaPredicted RBP8.15□□□□□ -1.1
CCNC-204ENST00000482541 KIR2DL1P43626 348 aaPredicted RBP8.15□□□□□ -1.1
CCNC-204ENST00000482541 DGKEP52429 567 aa8.15□□□□□ -1.1
CCNC-204ENST00000482541 COG7P83436 770 aa8.15□□□□□ -1.1
CCNC-204ENST00000482541 CETN1Q12798 172 aa8.15□□□□□ -1.1
CCNC-204ENST00000482541 RAB41Q5JT25 222 aa8.15□□□□□ -1.1
CCNC-204ENST00000482541 RASSF3Q86WH2 238 aa8.15□□□□□ -1.1
CCNC-204ENST00000482541 TMEM25Q86YD3 366 aa8.15□□□□□ -1.1
CCNC-204ENST00000482541 ETFBKMTQ8IXQ9 262 aa8.15□□□□□ -1.1
CCNC-204ENST00000482541 ARHGAP18Q8N392 663 aa8.15□□□□□ -1.1
CCNC-204ENST00000482541 HHIPQ96QV1 700 aa8.15□□□□□ -1.1
CCNC-204ENST00000482541 RTKNQ9BST9 563 aa8.15□□□□□ -1.1
CCNC-204ENST00000482541 NMUR1Q9HB89 426 aa8.15□□□□□ -1.1
CCNC-204ENST00000482541 ARHGEF4Q9NR80 690 aa8.15□□□□□ -1.1
CCNC-204ENST00000482541 OSER1Q9NX31 292 aa8.15□□□□□ -1.1
CCNC-204ENST00000482541 WDR35Q9P2L0 1181 aa8.15□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms