RNA–Protein interactions for RNA: ENST00000482310.5

HDAC1-208, Transcript of histone deacetylase 1, humanhuman

TSL 5

Gene HDAC1, Length 779 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC1-208ENST00000482310 KXD1Q9BQD3 176 aa13.84□□□□□ -0.19
HDAC1-208ENST00000482310 RNF38Q9H0F5 515 aa13.84□□□□□ -0.19
HDAC1-208ENST00000482310 ISCUQ9H1K1 167 aa13.84□□□□□ -0.19
HDAC1-208ENST00000482310 TASP1Q9H6P5 420 aa13.84□□□□□ -0.19
HDAC1-208ENST00000482310 POPDC2Q9HBU9 364 aa13.84□□□□□ -0.19
HDAC1-208ENST00000482310 AVENQ9NQS1 362 aaPredicted RBP13.84□□□□□ -0.19
HDAC1-208ENST00000482310 ABCC13Q9NSE7 274 aa13.84□□□□□ -0.19
HDAC1-208ENST00000482310 CDH7Q9ULB5 785 aa13.84□□□□□ -0.19
HDAC1-208ENST00000482310 NENFQ9UMX5 172 aa13.84□□□□□ -0.19
HDAC1-208ENST00000482310 EPN1Q9Y6I3 576 aaPredicted RBP13.84□□□□□ -0.19
HDAC1-208ENST00000482310 NRDCO43847 1150 aa13.83□□□□□ -0.2
HDAC1-208ENST00000482310 PRAMEF12O95522 483 aa13.83□□□□□ -0.2
HDAC1-208ENST00000482310 OAS1P00973 400 aaKnown RBP13.83□□□□□ -0.2
HDAC1-208ENST00000482310 FYNP06241 537 aa13.83□□□□□ -0.2
HDAC1-208ENST00000482310 H2AFZP0C0S5 128 aa13.83□□□□□ -0.2
HDAC1-208ENST00000482310 KRT3P12035 628 aa13.83□□□□□ -0.2
HDAC1-208ENST00000482310 KCNA4P22459 653 aa13.83□□□□□ -0.2
HDAC1-208ENST00000482310 FLT3P36888 993 aa13.83□□□□□ -0.2
HDAC1-208ENST00000482310 VIPR2P41587 438 aa13.83□□□□□ -0.2
HDAC1-208ENST00000482310 MAGEA1P43355 309 aa13.83□□□□□ -0.2
HDAC1-208ENST00000482310 PSEN1P49768 467 aa13.83□□□□□ -0.2
HDAC1-208ENST00000482310 SULT1E1P49888 294 aa13.83□□□□□ -0.2
HDAC1-208ENST00000482310 YWHAZP63104 245 aaKnown RBP13.83□□□□□ -0.2
HDAC1-208ENST00000482310 SMAD2Q15796 467 aaKnown RBP13.83□□□□□ -0.2
HDAC1-208ENST00000482310 FAM78AQ5JUQ0 283 aa13.83□□□□□ -0.2
HDAC1-208ENST00000482310 TRNP1Q6NT89 227 aa13.83□□□□□ -0.2
HDAC1-208ENST00000482310 PPP1R2P3Q6NXS1 205 aa13.83□□□□□ -0.2
HDAC1-208ENST00000482310 DCUN1D2Q6PH85 259 aa13.83□□□□□ -0.2
HDAC1-208ENST00000482310 H2AFVQ71UI9 128 aa13.83□□□□□ -0.2
HDAC1-208ENST00000482310 SLC26A9Q7LBE3 791 aa13.83□□□□□ -0.2
HDAC1-208ENST00000482310 KIAA1328Q86T90 577 aa13.83□□□□□ -0.2
HDAC1-208ENST00000482310 ZDHHC17Q8IUH5 632 aa13.83□□□□□ -0.2
HDAC1-208ENST00000482310 ARID3BQ8IVW6 561 aaPredicted RBP13.83□□□□□ -0.2
HDAC1-208ENST00000482310 CMTM8Q8IZV2 173 aa13.83□□□□□ -0.2
HDAC1-208ENST00000482310 SCML4Q8N228 414 aa13.83□□□□□ -0.2
HDAC1-208ENST00000482310 CCDC112Q8NEF3 446 aa13.83□□□□□ -0.2
HDAC1-208ENST00000482310 CTNNBL1Q8WYA6 563 aaPredicted RBP13.83□□□□□ -0.2
HDAC1-208ENST00000482310 TRIM11Q96F44 468 aa13.83□□□□□ -0.2
HDAC1-208ENST00000482310 CFAP57Q96MR6 1250 aa13.83□□□□□ -0.2
HDAC1-208ENST00000482310 NUP85Q9BW27 656 aa13.83□□□□□ -0.2
HDAC1-208ENST00000482310 FAM204AQ9H8W3 233 aa13.83□□□□□ -0.2
HDAC1-208ENST00000482310 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP13.83□□□□□ -0.2
HDAC1-208ENST00000482310 MARCH2Q9P0N8 246 aa13.83□□□□□ -0.2
HDAC1-208ENST00000482310 WDR35Q9P2L0 1181 aa13.83□□□□□ -0.2
HDAC1-208ENST00000482310 FAM50BQ9Y247 325 aa13.83□□□□□ -0.2
HDAC1-208ENST00000482310 CCL26Q9Y258 94 aa13.83□□□□□ -0.2
HDAC1-208ENST00000482310 PCDHA13Q9Y5I0 950 aa13.83□□□□□ -0.2
HDAC1-208ENST00000482310 CPQQ9Y646 472 aa13.83□□□□□ -0.2
HDAC1-208ENST00000482310 SLC12A8A0AV02 714 aa13.82□□□□□ -0.2
HDAC1-208ENST00000482310 EIF3CLB5ME19 914 aaKnown RBP13.82□□□□□ -0.2
HDAC1-208ENST00000482310 MYBL1P10243 752 aa13.82□□□□□ -0.2
HDAC1-208ENST00000482310 TFE3P19532 575 aaPredicted RBP13.82□□□□□ -0.2
HDAC1-208ENST00000482310 DDX6P26196 483 aaKnown RBP eCLIP13.82□□□□□ -0.2
HDAC1-208ENST00000482310 ATP5C1P36542 298 aaKnown RBP13.82□□□□□ -0.2
HDAC1-208ENST00000482310 RPL7AP62424 266 aaKnown RBP13.82□□□□□ -0.2
HDAC1-208ENST00000482310 GPC5P78333 572 aa13.82□□□□□ -0.2
HDAC1-208ENST00000482310 ATP11AP98196 1134 aa13.82□□□□□ -0.2
HDAC1-208ENST00000482310 NME3Q13232 169 aa13.82□□□□□ -0.2
HDAC1-208ENST00000482310 AAK1Q2M2I8 961 aa13.82□□□□□ -0.2
HDAC1-208ENST00000482310 C15orf59Q2T9L4 293 aaPredicted RBP13.82□□□□□ -0.2
HDAC1-208ENST00000482310 SNX30Q5VWJ9 437 aa13.82□□□□□ -0.2
HDAC1-208ENST00000482310 OTOP3Q7RTS5 596 aa13.82□□□□□ -0.2
HDAC1-208ENST00000482310 TAC4Q86UU9 113 aa13.82□□□□□ -0.2
HDAC1-208ENST00000482310 DQX1Q8TE96 717 aaKnown RBP13.82□□□□□ -0.2
HDAC1-208ENST00000482310 RXFP2Q8WXD0 754 aa13.82□□□□□ -0.2
HDAC1-208ENST00000482310 KHSRPQ92945 711 aaKnown RBP eCLIP13.82□□□□□ -0.2
HDAC1-208ENST00000482310 ACSF2Q96CM8 615 aaPredicted RBP13.82□□□□□ -0.2
HDAC1-208ENST00000482310 BTBD6Q96KE9 485 aa13.82□□□□□ -0.2
HDAC1-208ENST00000482310 EIF3CQ99613 913 aaKnown RBP13.82□□□□□ -0.2
HDAC1-208ENST00000482310 PHF7Q9BWX1 381 aaPredicted RBP13.82□□□□□ -0.2
HDAC1-208ENST00000482310 TRIM7Q9C029 511 aa13.82□□□□□ -0.2
HDAC1-208ENST00000482310 KCNF1Q9H3M0 494 aa13.82□□□□□ -0.2
HDAC1-208ENST00000482310 GKN1Q9NS71 199 aa13.82□□□□□ -0.2
HDAC1-208ENST00000482310 PARVAQ9NVD7 372 aa13.82□□□□□ -0.2
HDAC1-208ENST00000482310 CLIC5Q9NZA1 410 aa13.82□□□□□ -0.2
HDAC1-208ENST00000482310 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP13.82□□□□□ -0.2
HDAC1-208ENST00000482310 CTTNBP2NLQ9P2B4 639 aa13.82□□□□□ -0.2
HDAC1-208ENST00000482310 DNMT3LQ9UJW3 386 aa13.82□□□□□ -0.2
HDAC1-208ENST00000482310 REXO2Q9Y3B8 237 aaKnown RBP13.82□□□□□ -0.2
HDAC1-208ENST00000482310 NR2E1Q9Y466 385 aa13.82□□□□□ -0.2
HDAC1-208ENST00000482310 A0A0U1RQJ8 604 aa13.81□□□□□ -0.2
HDAC1-208ENST00000482310 ANKRD62A6NC57 917 aa13.81□□□□□ -0.2
HDAC1-208ENST00000482310 TMEM110-MUSTN1A8MSY1 372 aa13.81□□□□□ -0.2
HDAC1-208ENST00000482310 DPYSL4O14531 572 aa13.81□□□□□ -0.2
HDAC1-208ENST00000482310 LAMP2P13473 410 aa13.81□□□□□ -0.2
HDAC1-208ENST00000482310 GPD1P21695 349 aa13.81□□□□□ -0.2
HDAC1-208ENST00000482310 RFC1P35251 1148 aaPredicted RBP13.81□□□□□ -0.2
HDAC1-208ENST00000482310 MAMLD1Q13495 774 aa13.81□□□□□ -0.2
HDAC1-208ENST00000482310 PUS10Q3MIT2 529 aaKnown RBP13.81□□□□□ -0.2
HDAC1-208ENST00000482310 RAB6CQ53S08 254 aa13.81□□□□□ -0.2
HDAC1-208ENST00000482310 PARM1Q6UWI2 310 aa13.81□□□□□ -0.2
HDAC1-208ENST00000482310 TADA2BQ86TJ2 420 aa13.81□□□□□ -0.2
HDAC1-208ENST00000482310 SH3RF2Q8TEC5 729 aa13.81□□□□□ -0.2
HDAC1-208ENST00000482310 ATRIPQ8WXE1 791 aa13.81□□□□□ -0.2
HDAC1-208ENST00000482310 RSAD2Q8WXG1 361 aa13.81□□□□□ -0.2
HDAC1-208ENST00000482310 USP13Q92995 863 aaPredicted RBP13.81□□□□□ -0.2
HDAC1-208ENST00000482310 WBP2Q969T9 261 aa13.81□□□□□ -0.2
HDAC1-208ENST00000482310 RSPRY1Q96DX4 576 aa13.81□□□□□ -0.2
HDAC1-208ENST00000482310 VCPIP1Q96JH7 1222 aa13.81□□□□□ -0.2
HDAC1-208ENST00000482310 ASB16Q96NS5 453 aa13.81□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms