RNA–Protein interactions for RNA: ENST00000481929.5

HDAC6-224, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 591 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-224ENST00000481929 SIPA1Q96FS4 1042 aa15.84■□□□□ 0.13
HDAC6-224ENST00000481929 ACCSQ96QU6 501 aa15.84■□□□□ 0.13
HDAC6-224ENST00000481929 NUP58Q9BVL2 599 aa15.84■□□□□ 0.13
HDAC6-224ENST00000481929 GMIPQ9P107 970 aa15.84■□□□□ 0.13
HDAC6-224ENST00000481929 FTSJ1Q9UET6 329 aa15.84■□□□□ 0.13
HDAC6-224ENST00000481929 SNX11Q9Y5W9 270 aa15.84■□□□□ 0.13
HDAC6-224ENST00000481929 AK5Q9Y6K8 562 aa15.84■□□□□ 0.13
HDAC6-224ENST00000481929 ACADMP11310 421 aa15.83■□□□□ 0.12
HDAC6-224ENST00000481929 JUPP14923 745 aa15.83■□□□□ 0.12
HDAC6-224ENST00000481929 PTPN1P18031 435 aaKnown RBP15.83■□□□□ 0.12
HDAC6-224ENST00000481929 ZNF132P52740 706 aa15.83■□□□□ 0.12
HDAC6-224ENST00000481929 KCNA1Q09470 495 aa15.83■□□□□ 0.12
HDAC6-224ENST00000481929 SF3A1Q15459 793 aaKnown RBP15.83■□□□□ 0.12
HDAC6-224ENST00000481929 L1TD1Q5T7N2 865 aaKnown RBP15.83■□□□□ 0.12
HDAC6-224ENST00000481929 SNX30Q5VWJ9 437 aa15.83■□□□□ 0.12
HDAC6-224ENST00000481929 MCTP1Q6DN14 999 aa15.83■□□□□ 0.12
HDAC6-224ENST00000481929 HTR3DQ70Z44 454 aa15.83■□□□□ 0.12
HDAC6-224ENST00000481929 TMPRSS6Q8IU80 811 aa15.83■□□□□ 0.12
HDAC6-224ENST00000481929 OR6B3Q8NGW1 331 aa15.83■□□□□ 0.12
HDAC6-224ENST00000481929 MRPL45Q9BRJ2 306 aaKnown RBP15.83■□□□□ 0.12
HDAC6-224ENST00000481929 PCED1AQ9H1Q7 454 aa15.83■□□□□ 0.12
HDAC6-224ENST00000481929 MRPL44Q9H9J2 332 aaKnown RBP15.83■□□□□ 0.12
HDAC6-224ENST00000481929 UTP3Q9NQZ2 479 aaKnown RBP eCLIP15.83■□□□□ 0.121e-15■■■■■ 67.3
HDAC6-224ENST00000481929 INTS13Q9NVM9 706 aa15.83■□□□□ 0.12
HDAC6-224ENST00000481929 LSM7Q9UK45 103 aaKnown RBP15.83■□□□□ 0.12
HDAC6-224ENST00000481929 CLDN5O00501 218 aa15.82■□□□□ 0.12
HDAC6-224ENST00000481929 NPC1O15118 1278 aa15.82■□□□□ 0.12
HDAC6-224ENST00000481929 PCDHGA12O60330 932 aa15.82■□□□□ 0.12
HDAC6-224ENST00000481929 SYNCRIPO60506 623 aaKnown RBP15.82■□□□□ 0.12
HDAC6-224ENST00000481929 CISD3P0C7P0 127 aa15.82■□□□□ 0.12
HDAC6-224ENST00000481929 SYCP3Q8IZU3 236 aa15.82■□□□□ 0.12
HDAC6-224ENST00000481929 OR5B17Q8NGF7 314 aa15.82■□□□□ 0.12
HDAC6-224ENST00000481929 IGSF8Q969P0 613 aa15.82■□□□□ 0.12
HDAC6-224ENST00000481929 STRA6Q9BX79 667 aa15.82■□□□□ 0.12
HDAC6-224ENST00000481929 TRIM9Q9C026 710 aa15.82■□□□□ 0.12
HDAC6-224ENST00000481929 SEL1LQ9UBV2 794 aa15.82■□□□□ 0.12
HDAC6-224ENST00000481929 ANKRD6Q9Y2G4 727 aa15.82■□□□□ 0.12
HDAC6-224ENST00000481929 COL6A6A6NMZ7 2263 aa15.82■□□□□ 0.12
HDAC6-224ENST00000481929 ATP8B3O60423 1300 aa15.81■□□□□ 0.12
HDAC6-224ENST00000481929 TACC1O75410 805 aa15.81■□□□□ 0.12
HDAC6-224ENST00000481929 PRPF6O94906 941 aaKnown RBP15.81■□□□□ 0.12
HDAC6-224ENST00000481929 IGLV3-19P01714 112 aa15.81■□□□□ 0.12
HDAC6-224ENST00000481929 GRIA4P48058 902 aa15.81■□□□□ 0.12
HDAC6-224ENST00000481929 SLC5A3P53794 718 aa15.81■□□□□ 0.12
HDAC6-224ENST00000481929 GOLGA8FQ08AF8 430 aa15.81■□□□□ 0.12
HDAC6-224ENST00000481929 GOLGA8DPQ0D2H9 430 aa15.81■□□□□ 0.12
HDAC6-224ENST00000481929 PTPRJQ12913 1337 aa15.81■□□□□ 0.12
HDAC6-224ENST00000481929 ORC1Q13415 861 aa15.81■□□□□ 0.12
HDAC6-224ENST00000481929 DUOXA2Q1HG44 320 aa15.81■□□□□ 0.12
HDAC6-224ENST00000481929 DYMQ7RTS9 669 aa15.81■□□□□ 0.12
HDAC6-224ENST00000481929 CACUL1Q86Y37 369 aa15.81■□□□□ 0.12
HDAC6-224ENST00000481929 SCAMP5Q8TAC9 235 aa15.81■□□□□ 0.12
HDAC6-224ENST00000481929 SNIP1Q8TAD8 396 aaKnown RBP15.81■□□□□ 0.12
HDAC6-224ENST00000481929 BHMTQ93088 406 aa15.81■□□□□ 0.12
HDAC6-224ENST00000481929 CBWD1Q9BRT8 395 aa15.81■□□□□ 0.12
HDAC6-224ENST00000481929 B3GNT5Q9BYG0 378 aa15.81■□□□□ 0.12
HDAC6-224ENST00000481929 DPEP3Q9H4B8 488 aa15.81■□□□□ 0.12
HDAC6-224ENST00000481929 PCIF1Q9H4Z3 704 aa15.81■□□□□ 0.12
HDAC6-224ENST00000481929 NME7Q9Y5B8 376 aa15.81■□□□□ 0.12
HDAC6-224ENST00000481929 PCDHGA1Q9Y5H4 931 aa15.81■□□□□ 0.12
HDAC6-224ENST00000481929 H0Y8X5 98 aa15.8■□□□□ 0.12
HDAC6-224ENST00000481929 GREM1O60565 184 aa15.8■□□□□ 0.12
HDAC6-224ENST00000481929 TLR5O60602 858 aa15.8■□□□□ 0.12
HDAC6-224ENST00000481929 GCNT3O95395 438 aa15.8■□□□□ 0.12
HDAC6-224ENST00000481929 ZDHHC11BP0C7U3 371 aa15.8■□□□□ 0.12
HDAC6-224ENST00000481929 IL12RB1P42701 662 aa15.8■□□□□ 0.12
HDAC6-224ENST00000481929 CDH8P55286 799 aa15.8■□□□□ 0.12
HDAC6-224ENST00000481929 SURF1Q15526 300 aa15.8■□□□□ 0.12
HDAC6-224ENST00000481929 TAF1BQ53T94 588 aaPredicted RBP15.8■□□□□ 0.12
HDAC6-224ENST00000481929 FAM124AQ86V42 546 aa15.8■□□□□ 0.12
HDAC6-224ENST00000481929 GPD1LQ8N335 351 aa15.8■□□□□ 0.12
HDAC6-224ENST00000481929 B3GALNT2Q8NCR0 500 aa15.8■□□□□ 0.12
HDAC6-224ENST00000481929 UCMAQ8WVF2 138 aa15.8■□□□□ 0.12
HDAC6-224ENST00000481929 KCNK16Q96T55 309 aa15.8■□□□□ 0.12
HDAC6-224ENST00000481929 CLMPQ9H6B4 373 aa15.8■□□□□ 0.12
HDAC6-224ENST00000481929 TM9SF3Q9HD45 589 aa15.8■□□□□ 0.12
HDAC6-224ENST00000481929 TBC1D7Q9P0N9 293 aa15.8■□□□□ 0.12
HDAC6-224ENST00000481929 THAP10Q9P2Z0 257 aaPredicted RBP15.8■□□□□ 0.12
HDAC6-224ENST00000481929 SLCO1B1Q9Y6L6 691 aa15.8■□□□□ 0.12
HDAC6-224ENST00000481929 A8MXQ7 604 aa15.79■□□□□ 0.12
HDAC6-224ENST00000481929 ERVH48-1M5A8F1 160 aa15.79■□□□□ 0.12
HDAC6-224ENST00000481929 KCNK3O14649 394 aa15.79■□□□□ 0.12
HDAC6-224ENST00000481929 FAM163BP0C2L3 166 aa15.79■□□□□ 0.12
HDAC6-224ENST00000481929 CDK4P11802 303 aa15.79■□□□□ 0.12
HDAC6-224ENST00000481929 GAP43P17677 238 aa15.79■□□□□ 0.12
HDAC6-224ENST00000481929 CLDN6P56747 220 aa15.79■□□□□ 0.12
HDAC6-224ENST00000481929 TNNC1P63316 161 aa15.79■□□□□ 0.12
HDAC6-224ENST00000481929 IL9RQ01113 521 aa15.79■□□□□ 0.12
HDAC6-224ENST00000481929 ENPP2Q13822 863 aa15.79■□□□□ 0.12
HDAC6-224ENST00000481929 RTP5Q14D33 572 aa15.79■□□□□ 0.12
HDAC6-224ENST00000481929 E2F5Q15329 346 aa15.79■□□□□ 0.12
HDAC6-224ENST00000481929 PCSK4Q6UW60 755 aa15.79■□□□□ 0.12
HDAC6-224ENST00000481929 FAM35AQ86V20 835 aa15.79■□□□□ 0.12
HDAC6-224ENST00000481929 ZSCAN31Q96LW9 406 aaPredicted RBP15.79■□□□□ 0.12
HDAC6-224ENST00000481929 MED10Q9BTT4 135 aa15.79■□□□□ 0.12
HDAC6-224ENST00000481929 KLF16Q9BXK1 252 aaPredicted RBP15.79■□□□□ 0.12
HDAC6-224ENST00000481929 NRSN2Q9GZP1 204 aa15.79■□□□□ 0.12
HDAC6-224ENST00000481929 OSGEPQ9NPF4 335 aa15.79■□□□□ 0.12
HDAC6-224ENST00000481929 DMAP1Q9NPF5 467 aaPredicted RBP15.79■□□□□ 0.12
HDAC6-224ENST00000481929 COMMD8Q9NX08 183 aa15.79■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms