RNA–Protein interactions for RNA: ENST00000481131.5

UPF3A-207, Transcript of UPF3A, regulator of nonsense mediated mRNA decay, humanhuman

TSL 3

Gene UPF3A, Length 678 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3A-207ENST00000481131 CCDC117Q8IWD4 279 aaPredicted RBP5.98□□□□□ -1.45
UPF3A-207ENST00000481131 RUBCNQ92622 972 aa5.98□□□□□ -1.45
UPF3A-207ENST00000481131 CTHRC1Q96CG8 243 aa5.98□□□□□ -1.45
UPF3A-207ENST00000481131 RSPRY1Q96DX4 576 aa5.98□□□□□ -1.45
UPF3A-207ENST00000481131 FBXL20Q96IG2 436 aa5.98□□□□□ -1.45
UPF3A-207ENST00000481131 VPS16Q9H269 839 aa5.98□□□□□ -1.45
UPF3A-207ENST00000481131 FEM1BQ9UK73 627 aa5.98□□□□□ -1.45
UPF3A-207ENST00000481131 GABRQQ9UN88 632 aa5.98□□□□□ -1.45
UPF3A-207ENST00000481131 ARHGEF11O15085 1522 aa5.98□□□□□ -1.45
UPF3A-207ENST00000481131 CARMIL1Q5VZK9 1371 aa5.97□□□□□ -1.45
UPF3A-207ENST00000481131 H0Y3Z8 333 aa5.97□□□□□ -1.45
UPF3A-207ENST00000481131 PPP6R2O75170 966 aa5.97□□□□□ -1.45
UPF3A-207ENST00000481131 CER1O95813 267 aa5.97□□□□□ -1.45
UPF3A-207ENST00000481131 JUPP14923 745 aa5.97□□□□□ -1.45
UPF3A-207ENST00000481131 MCM5P33992 734 aa5.97□□□□□ -1.45
UPF3A-207ENST00000481131 PTPRRQ15256 657 aa5.97□□□□□ -1.45
UPF3A-207ENST00000481131 AASDHQ4L235 1098 aaPredicted RBP5.97□□□□□ -1.45
UPF3A-207ENST00000481131 FBXO47Q5MNV8 452 aa5.97□□□□□ -1.45
UPF3A-207ENST00000481131 TEDDM1Q5T9Z0 273 aa5.97□□□□□ -1.45
UPF3A-207ENST00000481131 TTC22Q5TAA0 569 aa5.97□□□□□ -1.45
UPF3A-207ENST00000481131 FAM90A2PQ658T7 463 aa5.97□□□□□ -1.45
UPF3A-207ENST00000481131 RRAGAQ7L523 313 aa5.97□□□□□ -1.45
UPF3A-207ENST00000481131 FTSJ3Q8IY81 847 aaKnown RBP5.97□□□□□ -1.45
UPF3A-207ENST00000481131 CSGALNACT1Q8TDX6 532 aa5.97□□□□□ -1.45
UPF3A-207ENST00000481131 SH3RF3Q8TEJ3 882 aaPredicted RBP5.97□□□□□ -1.45
UPF3A-207ENST00000481131 THAP4Q8WY91 577 aa5.97□□□□□ -1.45
UPF3A-207ENST00000481131 TFAP2BQ92481 460 aa5.97□□□□□ -1.45
UPF3A-207ENST00000481131 ZSCAN31Q96LW9 406 aaPredicted RBP5.97□□□□□ -1.45
UPF3A-207ENST00000481131 PRR25Q96S07 402 aa5.97□□□□□ -1.45
UPF3A-207ENST00000481131 ALG8Q9BVK2 526 aa5.97□□□□□ -1.45
UPF3A-207ENST00000481131 SAYSD1Q9NPB0 183 aa5.97□□□□□ -1.45
UPF3A-207ENST00000481131 TRIM36Q9NQ86 728 aa5.97□□□□□ -1.45
UPF3A-207ENST00000481131 KIF17Q9P2E2 1029 aa5.97□□□□□ -1.45
UPF3A-207ENST00000481131 STEAP1Q9UHE8 339 aa5.97□□□□□ -1.45
UPF3A-207ENST00000481131 PGAP2Q9UHJ9 254 aa5.97□□□□□ -1.45
UPF3A-207ENST00000481131 CNTN6Q9UQ52 1028 aa5.97□□□□□ -1.45
UPF3A-207ENST00000481131 LRRFIP2Q9Y608 721 aaKnown RBP5.97□□□□□ -1.45
UPF3A-207ENST00000481131 GXYLT2A0PJZ3 443 aa5.96□□□□□ -1.46
UPF3A-207ENST00000481131 C1QTNF3-AMACRE9PGA6 284 aa5.96□□□□□ -1.46
UPF3A-207ENST00000481131 M0QZQ0 153 aa5.96□□□□□ -1.46
UPF3A-207ENST00000481131 KIAA0355O15063 1070 aa5.96□□□□□ -1.46
UPF3A-207ENST00000481131 PEX1O43933 1283 aa5.96□□□□□ -1.46
UPF3A-207ENST00000481131 PMPCBO75439 489 aa5.96□□□□□ -1.46
UPF3A-207ENST00000481131 AGR2O95994 175 aa5.96□□□□□ -1.46
UPF3A-207ENST00000481131 PYGLP06737 847 aa5.96□□□□□ -1.46
UPF3A-207ENST00000481131 DRD1P21728 446 aa5.96□□□□□ -1.46
UPF3A-207ENST00000481131 CTGFP29279 349 aa5.96□□□□□ -1.46
UPF3A-207ENST00000481131 FOLR3P41439 243 aa5.96□□□□□ -1.46
UPF3A-207ENST00000481131 EIF4A1P60842 406 aaKnown RBP5.96□□□□□ -1.46
UPF3A-207ENST00000481131 ATPAF1Q5TC12 328 aaPredicted RBP5.96□□□□□ -1.46
UPF3A-207ENST00000481131 NFRKBQ6P4R8 1299 aa5.96□□□□□ -1.46
UPF3A-207ENST00000481131 CLASRPQ8N2M8 674 aaKnown RBP5.96□□□□□ -1.46
UPF3A-207ENST00000481131 XAGE5Q8WWM1 108 aa5.96□□□□□ -1.46
UPF3A-207ENST00000481131 PBKQ96KB5 322 aa5.96□□□□□ -1.46
UPF3A-207ENST00000481131 TRAPPC9Q96Q05 1148 aa5.96□□□□□ -1.46
UPF3A-207ENST00000481131 MECRQ9BV79 373 aa5.96□□□□□ -1.46
UPF3A-207ENST00000481131 TAF1DQ9H5J8 278 aaPredicted RBP5.96□□□□□ -1.46
UPF3A-207ENST00000481131 SYBUQ9NX95 663 aa5.96□□□□□ -1.46
UPF3A-207ENST00000481131 EHD3Q9NZN3 535 aa5.96□□□□□ -1.46
UPF3A-207ENST00000481131 NKX1-2Q9UD57 310 aaPredicted RBP5.96□□□□□ -1.46
UPF3A-207ENST00000481131 GJD2Q9UKL4 321 aa5.96□□□□□ -1.46
UPF3A-207ENST00000481131 ASAP1Q9ULH1 1129 aa5.96□□□□□ -1.46
UPF3A-207ENST00000481131 SH2B3Q9UQQ2 575 aa5.96□□□□□ -1.46
UPF3A-207ENST00000481131 LZTS1Q9Y250 596 aa5.96□□□□□ -1.46
UPF3A-207ENST00000481131 PRXQ9BXM0 1461 aa5.96□□□□□ -1.46
UPF3A-207ENST00000481131 RAPGEF2Q9Y4G8 1499 aa5.96□□□□□ -1.46
UPF3A-207ENST00000481131 KIF21BO75037 1637 aa5.96□□□□□ -1.46
UPF3A-207ENST00000481131 RRN3P2A6NIE6 340 aa5.95□□□□□ -1.46
UPF3A-207ENST00000481131 A8MVJ9 347 aa5.95□□□□□ -1.46
UPF3A-207ENST00000481131 KIF28PB7ZC32 967 aa5.95□□□□□ -1.46
UPF3A-207ENST00000481131 MPPED1O15442 326 aa5.95□□□□□ -1.46
UPF3A-207ENST00000481131 CTIFO43310 598 aaKnown RBP5.95□□□□□ -1.46
UPF3A-207ENST00000481131 SH3BP5O60239 455 aa5.95□□□□□ -1.46
UPF3A-207ENST00000481131 TMEM225BP0DP42 221 aa5.95□□□□□ -1.46
UPF3A-207ENST00000481131 NR2F6P10588 404 aa5.95□□□□□ -1.46
UPF3A-207ENST00000481131 CD19P15391 556 aa5.95□□□□□ -1.46
UPF3A-207ENST00000481131 ZFXP17010 805 aaPredicted RBP5.95□□□□□ -1.46
UPF3A-207ENST00000481131 GKP32189 559 aa5.95□□□□□ -1.46
UPF3A-207ENST00000481131 SEC24CP53992 1094 aa5.95□□□□□ -1.46
UPF3A-207ENST00000481131 DEUP1Q05D60 604 aa5.95□□□□□ -1.46
UPF3A-207ENST00000481131 IQGAP2Q13576 1575 aa5.95□□□□□ -1.46
UPF3A-207ENST00000481131 CSHL1Q14406 222 aa5.95□□□□□ -1.46
UPF3A-207ENST00000481131 PUM1Q14671 1186 aaKnown RBP eCLIP5.95□□□□□ -1.46
UPF3A-207ENST00000481131 LY6G5CQ5SRR4 150 aa5.95□□□□□ -1.46
UPF3A-207ENST00000481131 IGFL4Q6B9Z1 124 aa5.95□□□□□ -1.46
UPF3A-207ENST00000481131 Q6ZNX1 250 aa5.95□□□□□ -1.46
UPF3A-207ENST00000481131 RAB11FIP2Q7L804 512 aa5.95□□□□□ -1.46
UPF3A-207ENST00000481131 CPOQ8IVL8 374 aa5.95□□□□□ -1.46
UPF3A-207ENST00000481131 SLC44A3Q8N4M1 653 aa5.95□□□□□ -1.46
UPF3A-207ENST00000481131 SIMC1Q8NDZ2 872 aa5.95□□□□□ -1.46
UPF3A-207ENST00000481131 WDR60Q8WVS4 1066 aa5.95□□□□□ -1.46
UPF3A-207ENST00000481131 EIF2AK1Q9BQI3 630 aaKnown RBP5.95□□□□□ -1.46
UPF3A-207ENST00000481131 TWSG1Q9GZX9 223 aa5.95□□□□□ -1.46
UPF3A-207ENST00000481131 MAF1Q9H063 256 aa5.95□□□□□ -1.46
UPF3A-207ENST00000481131 VPS45Q9NRW7 570 aa5.95□□□□□ -1.46
UPF3A-207ENST00000481131 GGA3Q9NZ52 723 aa5.95□□□□□ -1.46
UPF3A-207ENST00000481131 REXO2Q9Y3B8 237 aaKnown RBP5.95□□□□□ -1.46
UPF3A-207ENST00000481131 ARAP1Q96P48 1450 aa5.95□□□□□ -1.46
UPF3A-207ENST00000481131 MAST3O60307 1309 aa5.95□□□□□ -1.46
UPF3A-207ENST00000481131 TISP43B9A030 160 aa5.94□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms