RNA–Protein interactions for RNA: ENST00000481048.5

LRCH3-216, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

TSL 3

Gene LRCH3, Length 536 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-216ENST00000481048 ARL6IP4Q66PJ3 421 aaKnown RBP7.03□□□□□ -1.28
LRCH3-216ENST00000481048 RINT1Q6NUQ1 792 aa7.03□□□□□ -1.28
LRCH3-216ENST00000481048 ZPBP2Q6X784 338 aa7.03□□□□□ -1.28
LRCH3-216ENST00000481048 TCEAL8Q8IYN2 117 aa7.03□□□□□ -1.28
LRCH3-216ENST00000481048 LEMD2Q8NC56 503 aa7.03□□□□□ -1.28
LRCH3-216ENST00000481048 APPL2Q8NEU8 664 aa7.03□□□□□ -1.28
LRCH3-216ENST00000481048 DACT3Q96B18 629 aaPredicted RBP7.03□□□□□ -1.28
LRCH3-216ENST00000481048 CLDN23Q96B33 292 aa7.03□□□□□ -1.28
LRCH3-216ENST00000481048 ELSPBP1Q96BH3 223 aa7.03□□□□□ -1.28
LRCH3-216ENST00000481048 CRELD1Q96HD1 420 aa7.03□□□□□ -1.28
LRCH3-216ENST00000481048 TCHPQ9BT92 498 aa7.03□□□□□ -1.28
LRCH3-216ENST00000481048 RPP25Q9BUL9 199 aaKnown RBP7.03□□□□□ -1.28
LRCH3-216ENST00000481048 CDT1Q9H211 546 aa7.03□□□□□ -1.28
LRCH3-216ENST00000481048 TRPV5Q9NQA5 729 aa7.03□□□□□ -1.28
LRCH3-216ENST00000481048 DNMT3BQ9UBC3 853 aaKnown RBP7.03□□□□□ -1.28
LRCH3-216ENST00000481048 FBXO4Q9UKT5 387 aa7.03□□□□□ -1.28
LRCH3-216ENST00000481048 MRPS17Q9Y2R5 130 aaKnown RBP7.03□□□□□ -1.28
LRCH3-216ENST00000481048 MRPS23Q9Y3D9 190 aaKnown RBP7.03□□□□□ -1.28
LRCH3-216ENST00000481048 CDY1Q9Y6F8 540 aa7.03□□□□□ -1.28
LRCH3-216ENST00000481048 SLC22A31A6NKX4 558 aa7.02□□□□□ -1.29
LRCH3-216ENST00000481048 PODXLO00592 558 aa7.02□□□□□ -1.29
LRCH3-216ENST00000481048 MAN2B1O00754 1011 aa7.02□□□□□ -1.29
LRCH3-216ENST00000481048 ABLIM1O14639 778 aa7.02□□□□□ -1.29
LRCH3-216ENST00000481048 CLDN3O15551 220 aa7.02□□□□□ -1.29
LRCH3-216ENST00000481048 ADAM12O43184 909 aa7.02□□□□□ -1.29
LRCH3-216ENST00000481048 LAMTOR5O43504 91 aa7.02□□□□□ -1.29
LRCH3-216ENST00000481048 TOM1L1O75674 476 aa7.02□□□□□ -1.29
LRCH3-216ENST00000481048 PLS3P13797 630 aa7.02□□□□□ -1.29
LRCH3-216ENST00000481048 GLULP15104 373 aa7.02□□□□□ -1.29
LRCH3-216ENST00000481048 PNLIPP16233 465 aa7.02□□□□□ -1.29
LRCH3-216ENST00000481048 TKTP29401 623 aaKnown RBP7.02□□□□□ -1.29
LRCH3-216ENST00000481048 MARCKSP29966 332 aaPredicted RBP7.02□□□□□ -1.29
LRCH3-216ENST00000481048 ABCD1P33897 745 aa7.02□□□□□ -1.29
LRCH3-216ENST00000481048 TOB1P50616 345 aaPredicted RBP7.02□□□□□ -1.29
LRCH3-216ENST00000481048 MLLT6P55198 1093 aaPredicted RBP7.02□□□□□ -1.29
LRCH3-216ENST00000481048 NTHL1P78549 312 aa7.02□□□□□ -1.29
LRCH3-216ENST00000481048 ROR1Q01973 937 aa7.02□□□□□ -1.29
LRCH3-216ENST00000481048 STRN3Q13033 797 aa7.02□□□□□ -1.29
LRCH3-216ENST00000481048 SNW1Q13573 536 aaKnown RBP7.02□□□□□ -1.29
LRCH3-216ENST00000481048 GLRA4Q5JXX5 417 aa7.02□□□□□ -1.29
LRCH3-216ENST00000481048 CYP4A22Q5TCH4 519 aa7.02□□□□□ -1.29
LRCH3-216ENST00000481048 ZNF852Q6ZMS4 543 aa7.02□□□□□ -1.29
LRCH3-216ENST00000481048 DAW1Q8N136 415 aa7.02□□□□□ -1.29
LRCH3-216ENST00000481048 ELMOD1Q8N336 334 aa7.02□□□□□ -1.29
LRCH3-216ENST00000481048 SYT2Q8N9I0 419 aaPredicted RBP7.02□□□□□ -1.29
LRCH3-216ENST00000481048 ITFG1Q8TB96 612 aa7.02□□□□□ -1.29
LRCH3-216ENST00000481048 KCNG4Q8TDN1 519 aa7.02□□□□□ -1.29
LRCH3-216ENST00000481048 DNASE1L2Q92874 299 aa7.02□□□□□ -1.29
LRCH3-216ENST00000481048 E2F7Q96AV8 911 aa7.02□□□□□ -1.29
LRCH3-216ENST00000481048 PLCD4Q9BRC7 762 aa7.02□□□□□ -1.29
LRCH3-216ENST00000481048 IER2Q9BTL4 223 aa7.02□□□□□ -1.29
LRCH3-216ENST00000481048 KIFC3Q9BVG8 833 aa7.02□□□□□ -1.29
LRCH3-216ENST00000481048 TARS2Q9BW92 718 aaKnown RBP7.02□□□□□ -1.29
LRCH3-216ENST00000481048 FAM126AQ9BYI3 521 aaPredicted RBP7.02□□□□□ -1.29
LRCH3-216ENST00000481048 GPR88Q9GZN0 384 aa7.02□□□□□ -1.29
LRCH3-216ENST00000481048 XYLT2Q9H1B5 865 aa7.02□□□□□ -1.29
LRCH3-216ENST00000481048 CXCL16Q9H2A7 254 aa7.02□□□□□ -1.29
LRCH3-216ENST00000481048 ZFP14Q9HCL3 533 aa7.02□□□□□ -1.29
LRCH3-216ENST00000481048 LARSQ9P2J5 1176 aaKnown RBP7.02□□□□□ -1.29
LRCH3-216ENST00000481048 AFF4Q9UHB7 1163 aaKnown RBP7.02□□□□□ -1.29
LRCH3-216ENST00000481048 NUB1Q9Y5A7 615 aa7.02□□□□□ -1.29
LRCH3-216ENST00000481048 PCDHB6Q9Y5E3 794 aa7.02□□□□□ -1.29
LRCH3-216ENST00000481048 DCHS1Q96JQ0 3298 aa7.02□□□□□ -1.29
LRCH3-216ENST00000481048 TICRRQ7Z2Z1 1910 aa7.01□□□□□ -1.29
LRCH3-216ENST00000481048 CACNA1BQ00975 2339 aa7.01□□□□□ -1.29
LRCH3-216ENST00000481048 WDR27A2RRH5 827 aa7.01□□□□□ -1.29
LRCH3-216ENST00000481048 E9PMD0 336 aa7.01□□□□□ -1.29
LRCH3-216ENST00000481048 M0QZQ0 153 aa7.01□□□□□ -1.29
LRCH3-216ENST00000481048 PRRG1O14668 218 aa7.01□□□□□ -1.29
LRCH3-216ENST00000481048 SLC16A4O15374 487 aa7.01□□□□□ -1.29
LRCH3-216ENST00000481048 XPOTO43592 962 aaKnown RBP7.01□□□□□ -1.29
LRCH3-216ENST00000481048 KINO60870 393 aaKnown RBP7.01□□□□□ -1.29
LRCH3-216ENST00000481048 OAZ2O95190 189 aa7.01□□□□□ -1.29
LRCH3-216ENST00000481048 CLTAP09496 248 aa7.01□□□□□ -1.29
LRCH3-216ENST00000481048 CYP3A5P20815 502 aa7.01□□□□□ -1.29
LRCH3-216ENST00000481048 LRPAP1P30533 357 aa7.01□□□□□ -1.29
LRCH3-216ENST00000481048 BRCC3P46736 316 aa7.01□□□□□ -1.29
LRCH3-216ENST00000481048 YBX1P67809 324 aaKnown RBP7.01□□□□□ -1.29
LRCH3-216ENST00000481048 ATP2C1P98194 919 aaPredicted RBP7.01□□□□□ -1.29
LRCH3-216ENST00000481048 MCL1Q07820 350 aa7.01□□□□□ -1.29
LRCH3-216ENST00000481048 ADCY1Q08828 1119 aa7.01□□□□□ -1.29
LRCH3-216ENST00000481048 MAPK7Q13164 816 aa7.01□□□□□ -1.29
LRCH3-216ENST00000481048 NOLC1Q14978 699 aaKnown RBP eCLIP7.01□□□□□ -1.29
LRCH3-216ENST00000481048 BBS9Q3SYG4 887 aa7.01□□□□□ -1.29
LRCH3-216ENST00000481048 SPECC1Q5M775 1068 aa7.01□□□□□ -1.29
LRCH3-216ENST00000481048 IQCEQ6IPM2 695 aa7.01□□□□□ -1.29
LRCH3-216ENST00000481048 ZNF280DQ6N043 979 aa7.01□□□□□ -1.29
LRCH3-216ENST00000481048 C1orf228Q6PIY5 440 aa7.01□□□□□ -1.29
LRCH3-216ENST00000481048 CD302Q8IX05 232 aa7.01□□□□□ -1.29
LRCH3-216ENST00000481048 TMEM161BQ8NDZ6 487 aa7.01□□□□□ -1.29
LRCH3-216ENST00000481048 DEPDC1BQ8WUY9 529 aa7.01□□□□□ -1.29
LRCH3-216ENST00000481048 RUBCNQ92622 972 aa7.01□□□□□ -1.29
LRCH3-216ENST00000481048 AK8Q96MA6 479 aa7.01□□□□□ -1.29
LRCH3-216ENST00000481048 ZNF512Q96ME7 567 aaPredicted RBP7.01□□□□□ -1.29
LRCH3-216ENST00000481048 ZMAT2Q96NC0 199 aaKnown RBP7.01□□□□□ -1.29
LRCH3-216ENST00000481048 MMTAG2Q9BU76 263 aaKnown RBP7.01□□□□□ -1.29
LRCH3-216ENST00000481048 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP7.01□□□□□ -1.29
LRCH3-216ENST00000481048 TRPV4Q9HBA0 871 aa7.01□□□□□ -1.29
LRCH3-216ENST00000481048 CYP4F11Q9HBI6 524 aa7.01□□□□□ -1.29
LRCH3-216ENST00000481048 POLD4Q9HCU8 107 aa7.01□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms