RNA–Protein interactions for RNA: ENST00000478743.1

HDAC8-217, Transcript of histone deacetylase 8, humanhuman

TSL 4

Gene HDAC8, Length 563 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC8-217ENST00000478743 CRTAC1Q9NQ79 661 aa13.02□□□□□ -0.33
HDAC8-217ENST00000478743 PLK2Q9NYY3 685 aa13.02□□□□□ -0.33
HDAC8-217ENST00000478743 GTF3C5Q9Y5Q8 519 aaPredicted RBP13.02□□□□□ -0.33
HDAC8-217ENST00000478743 TSPAN3O60637 253 aa13.01□□□□□ -0.33
HDAC8-217ENST00000478743 USP12O75317 370 aa13.01□□□□□ -0.33
HDAC8-217ENST00000478743 CTDNEP1O95476 244 aa13.01□□□□□ -0.33
HDAC8-217ENST00000478743 IGHV4-34P06331 123 aa13.01□□□□□ -0.33
HDAC8-217ENST00000478743 CDC25AP30304 524 aa13.01□□□□□ -0.33
HDAC8-217ENST00000478743 PGFP49763 221 aa13.01□□□□□ -0.33
HDAC8-217ENST00000478743 ST3GAL1Q11201 340 aa13.01□□□□□ -0.33
HDAC8-217ENST00000478743 ORC1Q13415 861 aa13.01□□□□□ -0.33
HDAC8-217ENST00000478743 ENPP2Q13822 863 aa13.01□□□□□ -0.33
HDAC8-217ENST00000478743 STARD3Q14849 445 aa13.01□□□□□ -0.33
HDAC8-217ENST00000478743 GEN1Q17RS7 908 aa13.01□□□□□ -0.33
HDAC8-217ENST00000478743 SFMBT2Q5VUG0 894 aa13.01□□□□□ -0.33
HDAC8-217ENST00000478743 FAM171BQ6P995 826 aa13.01□□□□□ -0.33
HDAC8-217ENST00000478743 CCDC81Q6ZN84 652 aa13.01□□□□□ -0.33
HDAC8-217ENST00000478743 DDX42Q86XP3 938 aaKnown RBP eCLIP13.01□□□□□ -0.33
HDAC8-217ENST00000478743 SORCS1Q8WY21 1168 aa13.01□□□□□ -0.33
HDAC8-217ENST00000478743 FUBP3Q96I24 572 aaKnown RBP eCLIP13.01□□□□□ -0.33
HDAC8-217ENST00000478743 NTPCRQ9BSD7 190 aaKnown RBP13.01□□□□□ -0.33
HDAC8-217ENST00000478743 IKZF4Q9H2S9 585 aa13.01□□□□□ -0.33
HDAC8-217ENST00000478743 ADAMTS1Q9UHI8 967 aa13.01□□□□□ -0.33
HDAC8-217ENST00000478743 SH3BP1Q9Y3L3 701 aa13.01□□□□□ -0.33
HDAC8-217ENST00000478743 PTPRJQ12913 1337 aa13.01□□□□□ -0.33
HDAC8-217ENST00000478743 CSMD1Q96PZ7 3565 aa13□□□□□ -0.33
HDAC8-217ENST00000478743 LRBAP50851 2863 aa13□□□□□ -0.33
HDAC8-217ENST00000478743 KIF26BQ2KJY2 2108 aa13□□□□□ -0.33
HDAC8-217ENST00000478743 ZFC3H1O60293 1989 aaKnown RBP13□□□□□ -0.33
HDAC8-217ENST00000478743 A0A0B4J269 797 aa13□□□□□ -0.33
HDAC8-217ENST00000478743 PP2D1A8MPX8 630 aa13□□□□□ -0.33
HDAC8-217ENST00000478743 F8VP50 259 aa13□□□□□ -0.33
HDAC8-217ENST00000478743 VILLO15195 856 aa13□□□□□ -0.33
HDAC8-217ENST00000478743 CKMT2P17540 419 aa13□□□□□ -0.33
HDAC8-217ENST00000478743 CD27P26842 260 aa13□□□□□ -0.33
HDAC8-217ENST00000478743 POLR2BP30876 1174 aaKnown RBP13□□□□□ -0.33
HDAC8-217ENST00000478743 DGKGP49619 791 aa13□□□□□ -0.33
HDAC8-217ENST00000478743 LIG4P49917 911 aa13□□□□□ -0.33
HDAC8-217ENST00000478743 ERVPABLB-1P60509 514 aa13□□□□□ -0.33
HDAC8-217ENST00000478743 CLN3Q13286 438 aa13□□□□□ -0.33
HDAC8-217ENST00000478743 AAMPQ13685 434 aa13□□□□□ -0.33
HDAC8-217ENST00000478743 PROX2Q3B8N5 592 aa13□□□□□ -0.33
HDAC8-217ENST00000478743 ZSCAN23Q3MJ62 389 aa13□□□□□ -0.33
HDAC8-217ENST00000478743 CDCP2Q5VXM1 449 aa13□□□□□ -0.33
HDAC8-217ENST00000478743 NUDT18Q6ZVK8 323 aa13□□□□□ -0.33
HDAC8-217ENST00000478743 ERMNQ8TAM6 284 aa13□□□□□ -0.33
HDAC8-217ENST00000478743 MSTO1Q9BUK6 570 aa13□□□□□ -0.33
HDAC8-217ENST00000478743 PCED1AQ9H1Q7 454 aa13□□□□□ -0.33
HDAC8-217ENST00000478743 EPN3Q9H201 632 aa13□□□□□ -0.33
HDAC8-217ENST00000478743 THAP10Q9P2Z0 257 aaPredicted RBP13□□□□□ -0.33
HDAC8-217ENST00000478743 DERAQ9Y315 318 aa13□□□□□ -0.33
HDAC8-217ENST00000478743 NME7Q9Y5B8 376 aa13□□□□□ -0.33
HDAC8-217ENST00000478743 CACNA1DQ01668 2161 aa13□□□□□ -0.33
HDAC8-217ENST00000478743 NPHP3-ACAD11A0A0J9YXS1 232 aa12.99□□□□□ -0.33
HDAC8-217ENST00000478743 HNRNPDLO14979 420 aaKnown RBP12.99□□□□□ -0.33
HDAC8-217ENST00000478743 SEMA4FO95754 770 aa12.99□□□□□ -0.33
HDAC8-217ENST00000478743 ACADMP11310 421 aa12.99□□□□□ -0.33
HDAC8-217ENST00000478743 PLS3P13797 630 aa12.99□□□□□ -0.33
HDAC8-217ENST00000478743 ACP1P24666 158 aa12.99□□□□□ -0.33
HDAC8-217ENST00000478743 LMO2P25791 158 aa12.99□□□□□ -0.33
HDAC8-217ENST00000478743 LSSP48449 732 aa12.99□□□□□ -0.33
HDAC8-217ENST00000478743 RIPPLY3P57055 190 aa12.99□□□□□ -0.33
HDAC8-217ENST00000478743 C21orf59P57076 290 aa12.99□□□□□ -0.33
HDAC8-217ENST00000478743 MYL7Q01449 175 aa12.99□□□□□ -0.33
HDAC8-217ENST00000478743 ILKQ13418 452 aa12.99□□□□□ -0.33
HDAC8-217ENST00000478743 ZNF234Q14588 700 aa12.99□□□□□ -0.33
HDAC8-217ENST00000478743 ARL13BQ3SXY8 428 aa12.99□□□□□ -0.33
HDAC8-217ENST00000478743 ZNF366Q8N895 744 aa12.99□□□□□ -0.33
HDAC8-217ENST00000478743 RBBP8NLQ8NC74 664 aaPredicted RBP12.99□□□□□ -0.33
HDAC8-217ENST00000478743 CXorf38Q8TB03 319 aa12.99□□□□□ -0.33
HDAC8-217ENST00000478743 TSPAN18Q96SJ8 248 aa12.99□□□□□ -0.33
HDAC8-217ENST00000478743 SYT15Q9BQS2 421 aa12.99□□□□□ -0.33
HDAC8-217ENST00000478743 ACE2Q9BYF1 805 aaPredicted RBP12.99□□□□□ -0.33
HDAC8-217ENST00000478743 POLR1BQ9H9Y6 1135 aa12.99□□□□□ -0.33
HDAC8-217ENST00000478743 C2CD2Q9Y426 696 aa12.99□□□□□ -0.33
HDAC8-217ENST00000478743 NBASA2RRP1 2371 aa12.99□□□□□ -0.33
HDAC8-217ENST00000478743 SPTBN1Q01082 2364 aaKnown RBP12.99□□□□□ -0.33
HDAC8-217ENST00000478743 ANKRD63C9JTQ0 380 aa12.98□□□□□ -0.33
HDAC8-217ENST00000478743 TRIM38O00635 465 aa12.98□□□□□ -0.33
HDAC8-217ENST00000478743 GABRDO14764 452 aa12.98□□□□□ -0.33
HDAC8-217ENST00000478743 CSO75390 466 aaKnown RBP12.98□□□□□ -0.33
HDAC8-217ENST00000478743 OR52Z1P0C646 297 aa12.98□□□□□ -0.33
HDAC8-217ENST00000478743 FDPSP14324 419 aaKnown RBP12.98□□□□□ -0.33
HDAC8-217ENST00000478743 ACO1P21399 889 aaKnown RBP12.98□□□□□ -0.33
HDAC8-217ENST00000478743 MUTP22033 750 aa12.98□□□□□ -0.33
HDAC8-217ENST00000478743 NCKAP1LP55160 1127 aa12.98□□□□□ -0.33
HDAC8-217ENST00000478743 NOP14P78316 857 aaKnown RBP12.98□□□□□ -0.33
HDAC8-217ENST00000478743 MAPK8IP2Q13387 824 aaPredicted RBP12.98□□□□□ -0.33
HDAC8-217ENST00000478743 SOWAHAQ2M3V2 549 aa12.98□□□□□ -0.33
HDAC8-217ENST00000478743 C3orf38Q5JPI3 329 aa12.98□□□□□ -0.33
HDAC8-217ENST00000478743 HAUS3Q68CZ6 603 aa12.98□□□□□ -0.33
HDAC8-217ENST00000478743 C1orf127Q8N9H9 656 aa12.98□□□□□ -0.33
HDAC8-217ENST00000478743 KBTBD7Q8WVZ9 684 aa12.98□□□□□ -0.33
HDAC8-217ENST00000478743 ZNF274Q96GC6 653 aaPredicted RBP12.98□□□□□ -0.33
HDAC8-217ENST00000478743 ZNF560Q96MR9 790 aa12.98□□□□□ -0.33
HDAC8-217ENST00000478743 XPO6Q96QU8 1125 aaKnown RBP12.98□□□□□ -0.33
HDAC8-217ENST00000478743 LHX5Q9H2C1 402 aa12.98□□□□□ -0.33
HDAC8-217ENST00000478743 MARK1Q9P0L2 795 aa12.98□□□□□ -0.33
HDAC8-217ENST00000478743 MAGEC2Q9UBF1 373 aaPredicted RBP12.98□□□□□ -0.33
HDAC8-217ENST00000478743 SATB2Q9UPW6 733 aa12.98□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms