RNA–Protein interactions for RNA: ENST00000477890.6

CPSF7-211, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 5

Gene CPSF7, Length 1,234 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-211ENST00000477890 HHLA1C9JL84 531 aa12.39□□□□□ -0.43
CPSF7-211ENST00000477890 IKBKBO14920 756 aa12.39□□□□□ -0.43
CPSF7-211ENST00000477890 MDM4O15151 490 aa12.39□□□□□ -0.43
CPSF7-211ENST00000477890 ZNF217O75362 1048 aa12.39□□□□□ -0.43
CPSF7-211ENST00000477890 RARGP13631 454 aa12.39□□□□□ -0.43
CPSF7-211ENST00000477890 PDIA4P13667 645 aaKnown RBP12.39□□□□□ -0.43
CPSF7-211ENST00000477890 NDUFV2P19404 249 aa12.39□□□□□ -0.43
CPSF7-211ENST00000477890 HOXD12P35452 270 aa12.39□□□□□ -0.43
CPSF7-211ENST00000477890 DNM1Q05193 864 aaKnown RBP12.39□□□□□ -0.43
CPSF7-211ENST00000477890 GFPT1Q06210 699 aaPredicted RBP12.39□□□□□ -0.43
CPSF7-211ENST00000477890 ZNF33AQ06730 810 aa12.39□□□□□ -0.43
CPSF7-211ENST00000477890 C1orf220Q5T0J3 134 aa12.39□□□□□ -0.43
CPSF7-211ENST00000477890 ATL3Q6DD88 541 aa12.39□□□□□ -0.43
CPSF7-211ENST00000477890 KIAA1211LQ6NV74 962 aa12.39□□□□□ -0.43
CPSF7-211ENST00000477890 TOGARAM2Q6ZUX3 1019 aa12.39□□□□□ -0.43
CPSF7-211ENST00000477890 HDDC3Q8N4P3 179 aa12.39□□□□□ -0.43
CPSF7-211ENST00000477890 CEP76Q8TAP6 659 aa12.39□□□□□ -0.43
CPSF7-211ENST00000477890 IPO4Q8TEX9 1081 aaKnown RBP12.39□□□□□ -0.43
CPSF7-211ENST00000477890 TMEM174Q8WUU8 243 aa12.39□□□□□ -0.43
CPSF7-211ENST00000477890 BHMTQ93088 406 aa12.39□□□□□ -0.43
CPSF7-211ENST00000477890 SNX21Q969T3 373 aa12.39□□□□□ -0.43
CPSF7-211ENST00000477890 CYFIP2Q96F07 1278 aa12.39□□□□□ -0.43
CPSF7-211ENST00000477890 HNRNPABQ99729 332 aaKnown RBP12.39□□□□□ -0.43
CPSF7-211ENST00000477890 SCNM1Q9BWG6 230 aa12.39□□□□□ -0.43
CPSF7-211ENST00000477890 IMPG2Q9BZV3 1241 aa12.39□□□□□ -0.43
CPSF7-211ENST00000477890 NMUR1Q9HB89 426 aa12.39□□□□□ -0.43
CPSF7-211ENST00000477890 MARK1Q9P0L2 795 aa12.39□□□□□ -0.43
CPSF7-211ENST00000477890 ZMIZ1Q9ULJ6 1067 aa12.39□□□□□ -0.43
CPSF7-211ENST00000477890 SLC6A14Q9UN76 642 aa12.39□□□□□ -0.43
CPSF7-211ENST00000477890 CYP8B1Q9UNU6 501 aa12.39□□□□□ -0.43
CPSF7-211ENST00000477890 RAD54BQ9Y620 910 aa12.39□□□□□ -0.43
CPSF7-211ENST00000477890 A0A1B0GVL5 298 aa12.38□□□□□ -0.43
CPSF7-211ENST00000477890 CALUO43852 315 aaPredicted RBP12.38□□□□□ -0.43
CPSF7-211ENST00000477890 KIF20AO95235 890 aa12.38□□□□□ -0.43
CPSF7-211ENST00000477890 SERPINF2P08697 491 aa12.38□□□□□ -0.43
CPSF7-211ENST00000477890 CD58P19256 250 aa12.38□□□□□ -0.43
CPSF7-211ENST00000477890 PLA2G4AP47712 749 aa12.38□□□□□ -0.43
CPSF7-211ENST00000477890 DGKGP49619 791 aa12.38□□□□□ -0.43
CPSF7-211ENST00000477890 VAMP7P51809 220 aa12.38□□□□□ -0.43
CPSF7-211ENST00000477890 INCA1Q0VD86 236 aa12.38□□□□□ -0.43
CPSF7-211ENST00000477890 PKP1Q13835 747 aa12.38□□□□□ -0.43
CPSF7-211ENST00000477890 C10orf120Q5SQS8 335 aa12.38□□□□□ -0.43
CPSF7-211ENST00000477890 SLC41A1Q8IVJ1 513 aa12.38□□□□□ -0.43
CPSF7-211ENST00000477890 HSCBQ8IWL3 235 aa12.38□□□□□ -0.43
CPSF7-211ENST00000477890 GABRG3Q99928 467 aa12.38□□□□□ -0.43
CPSF7-211ENST00000477890 NT5C1AQ9BXI3 368 aa12.38□□□□□ -0.43
CPSF7-211ENST00000477890 APOBEC3GQ9HC16 384 aaKnown RBP12.38□□□□□ -0.43
CPSF7-211ENST00000477890 CD248Q9HCU0 757 aa12.38□□□□□ -0.43
CPSF7-211ENST00000477890 MTPAPQ9NVV4 582 aaKnown RBP eCLIP12.38□□□□□ -0.43
CPSF7-211ENST00000477890 CACNA2D2Q9NY47 1150 aa12.38□□□□□ -0.43
CPSF7-211ENST00000477890 PLK2Q9NYY3 685 aa12.38□□□□□ -0.43
CPSF7-211ENST00000477890 DNMT3LQ9UJW3 386 aa12.38□□□□□ -0.43
CPSF7-211ENST00000477890 NAGPAQ9UK23 515 aa12.38□□□□□ -0.43
CPSF7-211ENST00000477890 RCOR1Q9UKL0 485 aa12.38□□□□□ -0.43
CPSF7-211ENST00000477890 RALYQ9UKM9 306 aaKnown RBP12.38□□□□□ -0.43
CPSF7-211ENST00000477890 PCDHA5Q9Y5H7 936 aa12.38□□□□□ -0.43
CPSF7-211ENST00000477890 PCDH15Q96QU1 1955 aa12.38□□□□□ -0.43
CPSF7-211ENST00000477890 FRYQ5TBA9 3013 aa12.37□□□□□ -0.43
CPSF7-211ENST00000477890 ZFHX4Q86UP3 3567 aa12.37□□□□□ -0.43
CPSF7-211ENST00000477890 CACNA1EQ15878 2313 aa12.37□□□□□ -0.43
CPSF7-211ENST00000477890 CFAP47Q6ZTR5 3102 aa12.37□□□□□ -0.43
CPSF7-211ENST00000477890 SPAARA0A1B0GVQ0 90 aa12.37□□□□□ -0.43
CPSF7-211ENST00000477890 OPHN1O60890 802 aa12.37□□□□□ -0.43
CPSF7-211ENST00000477890 TRIM49P0CI25 452 aa12.37□□□□□ -0.43
CPSF7-211ENST00000477890 TRIM49CP0CI26 452 aa12.37□□□□□ -0.43
CPSF7-211ENST00000477890 PFKFB1P16118 471 aa12.37□□□□□ -0.43
CPSF7-211ENST00000477890 NR2F2P24468 414 aa12.37□□□□□ -0.43
CPSF7-211ENST00000477890 GCLMP48507 274 aa12.37□□□□□ -0.43
CPSF7-211ENST00000477890 SEMA3BQ13214 749 aa12.37□□□□□ -0.43
CPSF7-211ENST00000477890 KLHDC10Q6PID8 442 aa12.37□□□□□ -0.43
CPSF7-211ENST00000477890 Q6ZNB5 142 aa12.37□□□□□ -0.43
CPSF7-211ENST00000477890 RABEPKQ7Z6M1 372 aa12.37□□□□□ -0.43
CPSF7-211ENST00000477890 RGL4Q8IZJ4 473 aa12.37□□□□□ -0.43
CPSF7-211ENST00000477890 MINDY1Q8N5J2 469 aa12.37□□□□□ -0.43
CPSF7-211ENST00000477890 TRIML1Q8N9V2 468 aa12.37□□□□□ -0.43
CPSF7-211ENST00000477890 KDF1Q8NAX2 398 aaPredicted RBP12.37□□□□□ -0.43
CPSF7-211ENST00000477890 HSPA12BQ96MM6 686 aa12.37□□□□□ -0.43
CPSF7-211ENST00000477890 TMEM121BQ9BXQ6 578 aaPredicted RBP12.37□□□□□ -0.43
CPSF7-211ENST00000477890 SLC6A17Q9H1V8 727 aa12.37□□□□□ -0.43
CPSF7-211ENST00000477890 MMRN2Q9H8L6 949 aa12.37□□□□□ -0.43
CPSF7-211ENST00000477890 CYP3A43Q9HB55 503 aa12.37□□□□□ -0.43
CPSF7-211ENST00000477890 CAPN10Q9HC96 672 aa12.37□□□□□ -0.43
CPSF7-211ENST00000477890 PNPLA8Q9NP80 782 aa12.37□□□□□ -0.43
CPSF7-211ENST00000477890 CD93Q9NPY3 652 aa12.37□□□□□ -0.43
CPSF7-211ENST00000477890 TRAF3IP3Q9Y228 551 aa12.37□□□□□ -0.43
CPSF7-211ENST00000477890 CHD6Q8TD26 2715 aa12.36□□□□□ -0.43
CPSF7-211ENST00000477890 WASH3PC4AMC7 463 aa12.36□□□□□ -0.43
CPSF7-211ENST00000477890 ARHGAP33O14559 1287 aa12.36□□□□□ -0.43
CPSF7-211ENST00000477890 MAPK13O15264 365 aa12.36□□□□□ -0.43
CPSF7-211ENST00000477890 HYAL3O43820 417 aaPredicted RBP12.36□□□□□ -0.43
CPSF7-211ENST00000477890 NDUFS2O75306 463 aa12.36□□□□□ -0.43
CPSF7-211ENST00000477890 CILPO75339 1184 aa12.36□□□□□ -0.43
CPSF7-211ENST00000477890 STC2O76061 302 aa12.36□□□□□ -0.43
CPSF7-211ENST00000477890 MYL1P05976 194 aa12.36□□□□□ -0.43
CPSF7-211ENST00000477890 CISD3P0C7P0 127 aa12.36□□□□□ -0.43
CPSF7-211ENST00000477890 RALAP11233 206 aa12.36□□□□□ -0.43
CPSF7-211ENST00000477890 KRT13P13646 458 aa12.36□□□□□ -0.43
CPSF7-211ENST00000477890 PSEN1P49768 467 aa12.36□□□□□ -0.43
CPSF7-211ENST00000477890 KIF11P52732 1056 aa12.36□□□□□ -0.43
CPSF7-211ENST00000477890 SIM1P81133 766 aaPredicted RBP12.36□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms