RNA–Protein interactions for RNA: ENST00000475873.2

USP4-209, Transcript of ubiquitin specific peptidase 4, humanhuman

TSL 3

Gene USP4, Length 536 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP4-209ENST00000475873 CYP11B2P19099 503 aa5.13□□□□□ -1.59
USP4-209ENST00000475873 CYP3A5P20815 502 aa5.13□□□□□ -1.59
USP4-209ENST00000475873 ACO1P21399 889 aaKnown RBP5.13□□□□□ -1.59
USP4-209ENST00000475873 TGM2P21980 687 aa5.13□□□□□ -1.59
USP4-209ENST00000475873 ACAT1P24752 427 aaKnown RBP5.13□□□□□ -1.59
USP4-209ENST00000475873 CHMLP26374 656 aa5.13□□□□□ -1.59
USP4-209ENST00000475873 RBMS1P29558 406 aaKnown RBP5.13□□□□□ -1.59
USP4-209ENST00000475873 RXRGP48443 463 aa5.13□□□□□ -1.59
USP4-209ENST00000475873 EFNA5P52803 228 aa5.13□□□□□ -1.59
USP4-209ENST00000475873 INHBCP55103 352 aa5.13□□□□□ -1.59
USP4-209ENST00000475873 C21orf59P57076 290 aa5.13□□□□□ -1.59
USP4-209ENST00000475873 NXPH1P58417 271 aa5.13□□□□□ -1.59
USP4-209ENST00000475873 KCNAB2Q13303 367 aa5.13□□□□□ -1.59
USP4-209ENST00000475873 MORC3Q14149 939 aa5.13□□□□□ -1.59
USP4-209ENST00000475873 PDIA5Q14554 519 aa5.13□□□□□ -1.59
USP4-209ENST00000475873 ENOX2Q16206 610 aaKnown RBP5.13□□□□□ -1.59
USP4-209ENST00000475873 GEN1Q17RS7 908 aa5.13□□□□□ -1.59
USP4-209ENST00000475873 ANO4Q32M45 955 aa5.13□□□□□ -1.59
USP4-209ENST00000475873 SGO2Q562F6 1265 aa5.13□□□□□ -1.59
USP4-209ENST00000475873 SPATA1Q5VX52 437 aa5.13□□□□□ -1.59
USP4-209ENST00000475873 PPP4R3AQ6IN85 833 aa5.13□□□□□ -1.59
USP4-209ENST00000475873 SDE2Q6IQ49 451 aa5.13□□□□□ -1.59
USP4-209ENST00000475873 ADAT2Q7Z6V5 191 aaKnown RBP5.13□□□□□ -1.59
USP4-209ENST00000475873 OSTM1Q86WC4 334 aa5.13□□□□□ -1.59
USP4-209ENST00000475873 CCDC12Q8WUD4 166 aaPredicted RBP5.13□□□□□ -1.59
USP4-209ENST00000475873 LEO1Q8WVC0 666 aaPredicted RBP5.13□□□□□ -1.59
USP4-209ENST00000475873 SORCS1Q8WY21 1168 aa5.13□□□□□ -1.59
USP4-209ENST00000475873 PRCCQ92733 491 aaPredicted RBP5.13□□□□□ -1.59
USP4-209ENST00000475873 CCDC97Q96F63 343 aaPredicted RBP5.13□□□□□ -1.59
USP4-209ENST00000475873 AIFM3Q96NN9 605 aa5.13□□□□□ -1.59
USP4-209ENST00000475873 TTLL2Q9BWV7 592 aa5.13□□□□□ -1.59
USP4-209ENST00000475873 OSBPL2Q9H1P3 480 aa5.13□□□□□ -1.59
USP4-209ENST00000475873 ADNPQ9H2P0 1102 aa5.13□□□□□ -1.59
USP4-209ENST00000475873 TTC12Q9H892 705 aaPredicted RBP5.13□□□□□ -1.59
USP4-209ENST00000475873 ABCB6Q9NP58 842 aa5.13□□□□□ -1.59
USP4-209ENST00000475873 ZNF71Q9NQZ8 489 aaPredicted RBP5.13□□□□□ -1.59
USP4-209ENST00000475873 UCKL1Q9NWZ5 548 aa5.13□□□□□ -1.59
USP4-209ENST00000475873 ARHGAP28Q9P2N2 729 aa5.13□□□□□ -1.59
USP4-209ENST00000475873 THAP10Q9P2Z0 257 aaPredicted RBP5.13□□□□□ -1.59
USP4-209ENST00000475873 SEL1LQ9UBV2 794 aa5.13□□□□□ -1.59
USP4-209ENST00000475873 SERGEFQ9UGK8 458 aa5.13□□□□□ -1.59
USP4-209ENST00000475873 UBQLN1Q9UMX0 589 aaKnown RBP5.13□□□□□ -1.59
USP4-209ENST00000475873 PCDHA4Q9UN74 947 aa5.13□□□□□ -1.59
USP4-209ENST00000475873 PCDHB6Q9Y5E3 794 aa5.13□□□□□ -1.59
USP4-209ENST00000475873 ACANP16112 2415 aa5.13□□□□□ -1.59
USP4-209ENST00000475873 FN1P02751 2386 aaKnown RBP5.12□□□□□ -1.59
USP4-209ENST00000475873 A0A1W2PPC4 97 aa5.12□□□□□ -1.59
USP4-209ENST00000475873 NEDD8-MDP1E9PL57 170 aa5.12□□□□□ -1.59
USP4-209ENST00000475873 K7EM74 188 aa5.12□□□□□ -1.59
USP4-209ENST00000475873 K7ERI5 159 aa5.12□□□□□ -1.59
USP4-209ENST00000475873 COCHO43405 550 aa5.12□□□□□ -1.59
USP4-209ENST00000475873 MED24O75448 989 aa5.12□□□□□ -1.59
USP4-209ENST00000475873 ADRB2P07550 413 aa5.12□□□□□ -1.59
USP4-209ENST00000475873 TYRP14679 529 aa5.12□□□□□ -1.59
USP4-209ENST00000475873 PFKLP17858 780 aa5.12□□□□□ -1.59
USP4-209ENST00000475873 SLC5A2P31639 672 aa5.12□□□□□ -1.59
USP4-209ENST00000475873 NPTX2P47972 431 aa5.12□□□□□ -1.59
USP4-209ENST00000475873 PGFP49763 221 aa5.12□□□□□ -1.59
USP4-209ENST00000475873 POLE2P56282 527 aa5.12□□□□□ -1.59
USP4-209ENST00000475873 NLRP5P59047 1200 aa5.12□□□□□ -1.59
USP4-209ENST00000475873 SMARCB1Q12824 385 aa5.12□□□□□ -1.59
USP4-209ENST00000475873 ZNF211Q13398 564 aaPredicted RBP5.12□□□□□ -1.59
USP4-209ENST00000475873 ZNF234Q14588 700 aa5.12□□□□□ -1.59
USP4-209ENST00000475873 NOLC1Q14978 699 aaKnown RBP eCLIP5.12□□□□□ -1.59
USP4-209ENST00000475873 FHL5Q5TD97 284 aa5.12□□□□□ -1.59
USP4-209ENST00000475873 BTBD8Q5XKL5 378 aa5.12□□□□□ -1.59
USP4-209ENST00000475873 TMEM215Q68D42 235 aa5.12□□□□□ -1.59
USP4-209ENST00000475873 JADE1Q6IE81 842 aa5.12□□□□□ -1.59
USP4-209ENST00000475873 FOXR1Q6PIV2 292 aa5.12□□□□□ -1.59
USP4-209ENST00000475873 SYNE3Q6ZMZ3 975 aa5.12□□□□□ -1.59
USP4-209ENST00000475873 TMC6Q7Z403 805 aa5.12□□□□□ -1.59
USP4-209ENST00000475873 CATSPER3Q86XQ3 398 aa5.12□□□□□ -1.59
USP4-209ENST00000475873 BLIDQ8IZY5 108 aa5.12□□□□□ -1.59
USP4-209ENST00000475873 ZNF366Q8N895 744 aa5.12□□□□□ -1.59
USP4-209ENST00000475873 CCDC148Q8NFR7 591 aa5.12□□□□□ -1.59
USP4-209ENST00000475873 SCFD1Q8WVM8 642 aa5.12□□□□□ -1.59
USP4-209ENST00000475873 BHMTQ93088 406 aa5.12□□□□□ -1.59
USP4-209ENST00000475873 TCTN2Q96GX1 697 aa5.12□□□□□ -1.59
USP4-209ENST00000475873 PYM1Q9BRP8 204 aaKnown RBP5.12□□□□□ -1.59
USP4-209ENST00000475873 SLC12A9Q9BXP2 914 aa5.12□□□□□ -1.59
USP4-209ENST00000475873 MRPL4Q9BYD3 311 aaKnown RBP5.12□□□□□ -1.59
USP4-209ENST00000475873 CCSER1Q9C0I3 900 aa5.12□□□□□ -1.59
USP4-209ENST00000475873 LSG1Q9H089 658 aaKnown RBP5.12□□□□□ -1.59
USP4-209ENST00000475873 RPF1Q9H9Y2 349 aaKnown RBP5.12□□□□□ -1.59
USP4-209ENST00000475873 GDF3Q9NR23 364 aa5.12□□□□□ -1.59
USP4-209ENST00000475873 WDR70Q9NW82 654 aa5.12□□□□□ -1.59
USP4-209ENST00000475873 DONSONQ9NYP3 566 aa5.12□□□□□ -1.59
USP4-209ENST00000475873 PLK2Q9NYY3 685 aa5.12□□□□□ -1.59
USP4-209ENST00000475873 TBC1D14Q9P2M4 693 aa5.12□□□□□ -1.59
USP4-209ENST00000475873 FBXO10Q9UK96 956 aa5.12□□□□□ -1.59
USP4-209ENST00000475873 GTF3C4Q9UKN8 822 aa5.12□□□□□ -1.59
USP4-209ENST00000475873 SNX14Q9Y5W7 946 aa5.12□□□□□ -1.59
USP4-209ENST00000475873 STAB1Q9NY15 2570 aa5.12□□□□□ -1.59
USP4-209ENST00000475873 DIDO1Q9BTC0 2240 aaKnown RBP5.12□□□□□ -1.59
USP4-209ENST00000475873 CSPG4Q6UVK1 2322 aa5.12□□□□□ -1.59
USP4-209ENST00000475873 PKDREJQ9NTG1 2253 aa5.11□□□□□ -1.59
USP4-209ENST00000475873 YKT6O15498 198 aa5.11□□□□□ -1.59
USP4-209ENST00000475873 CCNT1O60563 726 aaKnown RBP5.11□□□□□ -1.59
USP4-209ENST00000475873 ATP2C2O75185 946 aa5.11□□□□□ -1.59
USP4-209ENST00000475873 ITGA2BP08514 1039 aa5.11□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 65.1 ms