RNA–Protein interactions for RNA: ENST00000475043.5

PDPN-204, Transcript of podoplanin, humanhuman

TSL 3 BASIC

Gene PDPN, Length 849 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPN-204ENST00000475043 FOXR2Q6PJQ5 311 aa9.91□□□□□ -0.82
PDPN-204ENST00000475043 TMEM270Q6UE05 265 aa9.91□□□□□ -0.82
PDPN-204ENST00000475043 RSRC2Q7L4I2 434 aaKnown RBP9.91□□□□□ -0.82
PDPN-204ENST00000475043 SYT13Q7L8C5 426 aa9.91□□□□□ -0.82
PDPN-204ENST00000475043 CCDC186Q7Z3E2 898 aa9.91□□□□□ -0.82
PDPN-204ENST00000475043 TADA2BQ86TJ2 420 aa9.91□□□□□ -0.82
PDPN-204ENST00000475043 PIGZQ86VD9 579 aa9.91□□□□□ -0.82
PDPN-204ENST00000475043 C12orf40Q86WS4 652 aa9.91□□□□□ -0.82
PDPN-204ENST00000475043 TTC30AQ86WT1 665 aa9.91□□□□□ -0.82
PDPN-204ENST00000475043 TMEM25Q86YD3 366 aa9.91□□□□□ -0.82
PDPN-204ENST00000475043 CAMKK1Q8N5S9 505 aa9.91□□□□□ -0.82
PDPN-204ENST00000475043 TRIML1Q8N9V2 468 aa9.91□□□□□ -0.82
PDPN-204ENST00000475043 ACDQ96AP0 544 aa9.91□□□□□ -0.82
PDPN-204ENST00000475043 KLF16Q9BXK1 252 aaPredicted RBP9.91□□□□□ -0.82
PDPN-204ENST00000475043 LRRC4Q9HBW1 653 aa9.91□□□□□ -0.82
PDPN-204ENST00000475043 ARHGEF4Q9NR80 690 aa9.91□□□□□ -0.82
PDPN-204ENST00000475043 SPHK2Q9NRA0 654 aa9.91□□□□□ -0.82
PDPN-204ENST00000475043 MTPAPQ9NVV4 582 aaKnown RBP eCLIP9.91□□□□□ -0.82
PDPN-204ENST00000475043 RASAL2Q9UJF2 1139 aa9.91□□□□□ -0.82
PDPN-204ENST00000475043 PCDHB4Q9Y5E5 795 aa9.91□□□□□ -0.82
PDPN-204ENST00000475043 UTP18Q9Y5J1 556 aaKnown RBP eCLIP9.91□□□□□ -0.82
PDPN-204ENST00000475043 USP3Q9Y6I4 520 aa9.91□□□□□ -0.82
PDPN-204ENST00000475043 EML5Q05BV3 1969 aa9.91□□□□□ -0.82
PDPN-204ENST00000475043 CFAP54Q96N23 3096 aa9.9□□□□□ -0.82
PDPN-204ENST00000475043 ANTXRLA6NF34 631 aa9.9□□□□□ -0.82
PDPN-204ENST00000475043 PALM2-AKAP2B1ALY0 433 aaPredicted RBP9.9□□□□□ -0.82
PDPN-204ENST00000475043 NEDD8-MDP1E9PL57 170 aa9.9□□□□□ -0.82
PDPN-204ENST00000475043 TULP2O00295 520 aa9.9□□□□□ -0.82
PDPN-204ENST00000475043 P4HA2O15460 535 aa9.9□□□□□ -0.82
PDPN-204ENST00000475043 RPP40O75818 363 aaKnown RBP9.9□□□□□ -0.82
PDPN-204ENST00000475043 AFPP02771 609 aaKnown RBP9.9□□□□□ -0.82
PDPN-204ENST00000475043 VDRP11473 427 aa9.9□□□□□ -0.82
PDPN-204ENST00000475043 HOXA6P31267 233 aa9.9□□□□□ -0.82
PDPN-204ENST00000475043 EIF2DP41214 584 aaKnown RBP9.9□□□□□ -0.82
PDPN-204ENST00000475043 PLA2G4AP47712 749 aa9.9□□□□□ -0.82
PDPN-204ENST00000475043 ID4P47928 161 aa9.9□□□□□ -0.82
PDPN-204ENST00000475043 PDE4CQ08493 712 aa9.9□□□□□ -0.82
PDPN-204ENST00000475043 SPEM2Q0P670 501 aa9.9□□□□□ -0.82
PDPN-204ENST00000475043 MESP2Q0VG99 397 aa9.9□□□□□ -0.82
PDPN-204ENST00000475043 BST2Q10589 180 aaKnown RBP9.9□□□□□ -0.82
PDPN-204ENST00000475043 EFEMP1Q12805 493 aa9.9□□□□□ -0.82
PDPN-204ENST00000475043 SWT1Q5T5J6 900 aaKnown RBP9.9□□□□□ -0.82
PDPN-204ENST00000475043 KLHDC10Q6PID8 442 aa9.9□□□□□ -0.82
PDPN-204ENST00000475043 TPGS1Q6ZTW0 290 aa9.9□□□□□ -0.82
PDPN-204ENST00000475043 HTR3DQ70Z44 454 aa9.9□□□□□ -0.82
PDPN-204ENST00000475043 RRAGAQ7L523 313 aa9.9□□□□□ -0.82
PDPN-204ENST00000475043 SCD5Q86SK9 330 aa9.9□□□□□ -0.82
PDPN-204ENST00000475043 WDR5BQ86VZ2 330 aa9.9□□□□□ -0.82
PDPN-204ENST00000475043 SFTPA1Q8IWL2 248 aa9.9□□□□□ -0.82
PDPN-204ENST00000475043 TRIM59Q8IWR1 403 aa9.9□□□□□ -0.82
PDPN-204ENST00000475043 ARHGAP18Q8N392 663 aa9.9□□□□□ -0.82
PDPN-204ENST00000475043 CCDC33Q8N5R6 958 aa9.9□□□□□ -0.82
PDPN-204ENST00000475043 UBA3Q8TBC4 463 aa9.9□□□□□ -0.82
PDPN-204ENST00000475043 IPO9Q96P70 1041 aaKnown RBP9.9□□□□□ -0.82
PDPN-204ENST00000475043 CDK5RAP1Q96SZ6 601 aaKnown RBP9.9□□□□□ -0.82
PDPN-204ENST00000475043 IRX2Q9BZI1 471 aaPredicted RBP9.9□□□□□ -0.82
PDPN-204ENST00000475043 UBXN6Q9BZV1 441 aa9.9□□□□□ -0.82
PDPN-204ENST00000475043 CLIC5Q9NZA1 410 aa9.9□□□□□ -0.82
PDPN-204ENST00000475043 DEC1Q9P2X7 70 aa9.9□□□□□ -0.82
PDPN-204ENST00000475043 RWDD2AQ9UIY3 292 aa9.9□□□□□ -0.82
PDPN-204ENST00000475043 KIAA1257Q9ULG3 409 aa9.9□□□□□ -0.82
PDPN-204ENST00000475043 USP18Q9UMW8 372 aa9.9□□□□□ -0.82
PDPN-204ENST00000475043 CCDC163A0A0D9SF12 145 aa9.89□□□□□ -0.83
PDPN-204ENST00000475043 TBC1D3BA6NDS4 549 aa9.89□□□□□ -0.83
PDPN-204ENST00000475043 XPO1O14980 1071 aaKnown RBP9.89□□□□□ -0.83
PDPN-204ENST00000475043 AXIN1O15169 862 aa9.89□□□□□ -0.83
PDPN-204ENST00000475043 PMM2O15305 246 aa9.89□□□□□ -0.83
PDPN-204ENST00000475043 HOXC11O43248 304 aaPredicted RBP9.89□□□□□ -0.83
PDPN-204ENST00000475043 TULP3O75386 442 aa9.89□□□□□ -0.83
PDPN-204ENST00000475043 APBB3O95704 486 aa9.89□□□□□ -0.83
PDPN-204ENST00000475043 ZBED1O96006 694 aa9.89□□□□□ -0.83
PDPN-204ENST00000475043 HMBSP08397 361 aa9.89□□□□□ -0.83
PDPN-204ENST00000475043 PAEPP09466 180 aa9.89□□□□□ -0.83
PDPN-204ENST00000475043 LCP1P13796 627 aa9.89□□□□□ -0.83
PDPN-204ENST00000475043 GRIA2P42262 883 aa9.89□□□□□ -0.83
PDPN-204ENST00000475043 DGKEP52429 567 aa9.89□□□□□ -0.83
PDPN-204ENST00000475043 MARSP56192 900 aaKnown RBP9.89□□□□□ -0.83
PDPN-204ENST00000475043 YWHAGP61981 247 aaKnown RBP eCLIP9.89□□□□□ -0.83
PDPN-204ENST00000475043 MRPS21P82921 87 aaKnown RBP9.89□□□□□ -0.83
PDPN-204ENST00000475043 COG7P83436 770 aa9.89□□□□□ -0.83
PDPN-204ENST00000475043 ADIGQ0VDE8 80 aa9.89□□□□□ -0.83
PDPN-204ENST00000475043 TPD52L1Q16890 204 aaPredicted RBP9.89□□□□□ -0.83
PDPN-204ENST00000475043 PREPLQ4J6C6 727 aaPredicted RBP9.89□□□□□ -0.83
PDPN-204ENST00000475043 RAB41Q5JT25 222 aa9.89□□□□□ -0.83
PDPN-204ENST00000475043 EMC10Q5UCC4 262 aa9.89□□□□□ -0.83
PDPN-204ENST00000475043 ARHGEF19Q8IW93 802 aa9.89□□□□□ -0.83
PDPN-204ENST00000475043 SIX6OS1Q8N1H7 587 aa9.89□□□□□ -0.83
PDPN-204ENST00000475043 ALLCQ8N6M5 410 aa9.89□□□□□ -0.83
PDPN-204ENST00000475043 GPR161Q8N6U8 529 aaKnown RBP9.89□□□□□ -0.83
PDPN-204ENST00000475043 UBR7Q8N806 425 aa9.89□□□□□ -0.83
PDPN-204ENST00000475043 EHBP1Q8NDI1 1231 aa9.89□□□□□ -0.83
PDPN-204ENST00000475043 TSTD1Q8NFU3 115 aa9.89□□□□□ -0.83
PDPN-204ENST00000475043 USP33Q8TEY7 942 aa9.89□□□□□ -0.83
PDPN-204ENST00000475043 GAB3Q8WWW8 586 aa9.89□□□□□ -0.83
PDPN-204ENST00000475043 NDRG1Q92597 394 aaKnown RBP9.89□□□□□ -0.83
PDPN-204ENST00000475043 KAT5Q92993 513 aa9.89□□□□□ -0.83
PDPN-204ENST00000475043 BHMTQ93088 406 aa9.89□□□□□ -0.83
PDPN-204ENST00000475043 XPO6Q96QU8 1125 aaKnown RBP9.89□□□□□ -0.83
PDPN-204ENST00000475043 BBS2Q9BXC9 721 aa9.89□□□□□ -0.83
PDPN-204ENST00000475043 ULBP1Q9BZM6 244 aa9.89□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms