RNA–Protein interactions for RNA: ENST00000473334.1

PTP4A1-203, Transcript of protein tyrosine phosphatase type IVA, member 1, humanhuman

TSL 3

Gene PTP4A1, Length 638 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A1-203ENST00000473334 TRIM65Q6PJ69 517 aa23.64■■□□□ 1.37
PTP4A1-203ENST00000473334 GBP6Q6ZN66 633 aa23.64■■□□□ 1.37
PTP4A1-203ENST00000473334 FAM114A1Q8IWE2 563 aa23.64■■□□□ 1.37
PTP4A1-203ENST00000473334 SCML4Q8N228 414 aa23.64■■□□□ 1.37
PTP4A1-203ENST00000473334 SLC35F5Q8WV83 523 aa23.64■■□□□ 1.37
PTP4A1-203ENST00000473334 SECISBP2LQ93073 1101 aaKnown RBP23.64■■□□□ 1.37
PTP4A1-203ENST00000473334 FAM81BQ96LP2 452 aa23.64■■□□□ 1.37
PTP4A1-203ENST00000473334 CNGB3Q9NQW8 809 aa23.64■■□□□ 1.37
PTP4A1-203ENST00000473334 POLR3BQ9NW08 1133 aaPredicted RBP23.64■■□□□ 1.37
PTP4A1-203ENST00000473334 MARCH2Q9P0N8 246 aa23.64■■□□□ 1.37
PTP4A1-203ENST00000473334 STRIP2Q9ULQ0 834 aa23.64■■□□□ 1.37
PTP4A1-203ENST00000473334 GTPBP10A4D1E9 387 aaKnown RBP23.63■■□□□ 1.37
PTP4A1-203ENST00000473334 HRO43593 1189 aa23.63■■□□□ 1.37
PTP4A1-203ENST00000473334 CALCAP01258 141 aa23.63■■□□□ 1.37
PTP4A1-203ENST00000473334 KRT5P13647 590 aa23.63■■□□□ 1.37
PTP4A1-203ENST00000473334 MFAP3P55082 362 aa23.63■■□□□ 1.37
PTP4A1-203ENST00000473334 MRPS21P82921 87 aaKnown RBP23.63■■□□□ 1.37
PTP4A1-203ENST00000473334 PREPLQ4J6C6 727 aaPredicted RBP23.63■■□□□ 1.37
PTP4A1-203ENST00000473334 C2orf27AQ580R0 203 aa23.63■■□□□ 1.37
PTP4A1-203ENST00000473334 PRR23BQ6ZRT6 265 aa23.63■■□□□ 1.37
PTP4A1-203ENST00000473334 SFTPA1Q8IWL2 248 aa23.63■■□□□ 1.37
PTP4A1-203ENST00000473334 PHTF2Q8N3S3 785 aa23.63■■□□□ 1.37
PTP4A1-203ENST00000473334 DCLK2Q8N568 766 aa23.63■■□□□ 1.37
PTP4A1-203ENST00000473334 NAT16Q8N8M0 369 aa23.63■■□□□ 1.37
PTP4A1-203ENST00000473334 NDRG1Q92597 394 aaKnown RBP23.63■■□□□ 1.37
PTP4A1-203ENST00000473334 HHIPQ96QV1 700 aa23.63■■□□□ 1.37
PTP4A1-203ENST00000473334 DCLK3Q9C098 648 aa23.63■■□□□ 1.37
PTP4A1-203ENST00000473334 OLA1Q9NTK5 396 aaKnown RBP23.63■■□□□ 1.37
PTP4A1-203ENST00000473334 MARK1Q9P0L2 795 aa23.63■■□□□ 1.37
PTP4A1-203ENST00000473334 DEC1Q9P2X7 70 aa23.63■■□□□ 1.37
PTP4A1-203ENST00000473334 ZNF510Q9Y2H8 683 aa23.63■■□□□ 1.37
PTP4A1-203ENST00000473334 EP300Q09472 2414 aaPredicted RBP23.63■■□□□ 1.37
PTP4A1-203ENST00000473334 A0A0A0MRY4 1105 aa23.62■■□□□ 1.37
PTP4A1-203ENST00000473334 TULP3O75386 442 aa23.62■■□□□ 1.37
PTP4A1-203ENST00000473334 LCP1P13796 627 aa23.62■■□□□ 1.37
PTP4A1-203ENST00000473334 SLC9A1P19634 815 aa23.62■■□□□ 1.37
PTP4A1-203ENST00000473334 TNFRSF4P43489 277 aa23.62■■□□□ 1.37
PTP4A1-203ENST00000473334 PXNP49023 591 aaPredicted RBP23.62■■□□□ 1.37
PTP4A1-203ENST00000473334 RGS7P49802 495 aa23.62■■□□□ 1.37
PTP4A1-203ENST00000473334 DAOAP59103 153 aa23.62■■□□□ 1.37
PTP4A1-203ENST00000473334 SRSF5Q13243 272 aaKnown RBP23.62■■□□□ 1.37
PTP4A1-203ENST00000473334 SIM2Q14190 667 aaPredicted RBP23.62■■□□□ 1.37
PTP4A1-203ENST00000473334 MAN2A1Q16706 1144 aa23.62■■□□□ 1.37
PTP4A1-203ENST00000473334 EXOC3L4Q17RC7 722 aa23.62■■□□□ 1.37
PTP4A1-203ENST00000473334 PMF1Q6P1K2 205 aa23.62■■□□□ 1.37
PTP4A1-203ENST00000473334 BBS2Q9BXC9 721 aa23.62■■□□□ 1.37
PTP4A1-203ENST00000473334 WDR35Q9P2L0 1181 aa23.62■■□□□ 1.37
PTP4A1-203ENST00000473334 APEX2Q9UBZ4 518 aa23.62■■□□□ 1.37
PTP4A1-203ENST00000473334 GPR179Q6PRD1 2367 aa23.62■■□□□ 1.37
PTP4A1-203ENST00000473334 EML5Q05BV3 1969 aa23.61■■□□□ 1.37
PTP4A1-203ENST00000473334 SLC12A8A0AV02 714 aa23.61■■□□□ 1.37
PTP4A1-203ENST00000473334 ANTXRLA6NF34 631 aa23.61■■□□□ 1.37
PTP4A1-203ENST00000473334 YJEFN3A6XGL0 299 aa23.61■■□□□ 1.37
PTP4A1-203ENST00000473334 E7ENQ6 273 aa23.61■■□□□ 1.37
PTP4A1-203ENST00000473334 NEDD8-MDP1E9PL57 170 aa23.61■■□□□ 1.37
PTP4A1-203ENST00000473334 HMBSP08397 361 aa23.61■■□□□ 1.37
PTP4A1-203ENST00000473334 CORO1AP31146 461 aaKnown RBP23.61■■□□□ 1.37
PTP4A1-203ENST00000473334 LPAL2Q16609 132 aa23.61■■□□□ 1.37
PTP4A1-203ENST00000473334 BSPRYQ5W0U4 402 aa23.61■■□□□ 1.37
PTP4A1-203ENST00000473334 LAIR1Q6GTX8 287 aa23.61■■□□□ 1.37
PTP4A1-203ENST00000473334 GJB7Q6PEY0 223 aa23.61■■□□□ 1.37
PTP4A1-203ENST00000473334 TPGS1Q6ZTW0 290 aa23.61■■□□□ 1.37
PTP4A1-203ENST00000473334 HSFY1Q96LI6 401 aa23.61■■□□□ 1.37
PTP4A1-203ENST00000473334 XPO6Q96QU8 1125 aaKnown RBP23.61■■□□□ 1.37
PTP4A1-203ENST00000473334 ABCC13Q9NSE7 274 aa23.61■■□□□ 1.37
PTP4A1-203ENST00000473334 GMEB2Q9UKD1 530 aa23.61■■□□□ 1.37
PTP4A1-203ENST00000473334 MMP17Q9ULZ9 603 aa23.61■■□□□ 1.37
PTP4A1-203ENST00000473334 CACNG3O60359 315 aa23.6■■□□□ 1.37
PTP4A1-203ENST00000473334 APBB3O95704 486 aa23.6■■□□□ 1.37
PTP4A1-203ENST00000473334 KLKB1P03952 638 aa23.6■■□□□ 1.37
PTP4A1-203ENST00000473334 TYRP14679 529 aa23.6■■□□□ 1.37
PTP4A1-203ENST00000473334 HSF5Q4G112 596 aaPredicted RBP23.6■■□□□ 1.37
PTP4A1-203ENST00000473334 CT47A1Q5JQC4 288 aaPredicted RBP23.6■■□□□ 1.37
PTP4A1-203ENST00000473334 NUDT18Q6ZVK8 323 aa23.6■■□□□ 1.37
PTP4A1-203ENST00000473334 CEP68Q76N32 757 aa23.6■■□□□ 1.37
PTP4A1-203ENST00000473334 TERB1Q8NA31 727 aa23.6■■□□□ 1.37
PTP4A1-203ENST00000473334 GPT2Q8TD30 523 aa23.6■■□□□ 1.37
PTP4A1-203ENST00000473334 RNF139Q8WU17 664 aa23.6■■□□□ 1.37
PTP4A1-203ENST00000473334 GAB3Q8WWW8 586 aa23.6■■□□□ 1.37
PTP4A1-203ENST00000473334 IRGQQ8WZA9 623 aa23.6■■□□□ 1.37
PTP4A1-203ENST00000473334 PLD4Q96BZ4 506 aa23.6■■□□□ 1.37
PTP4A1-203ENST00000473334 DNAJC17Q9NVM6 304 aaKnown RBP23.6■■□□□ 1.37
PTP4A1-203ENST00000473334 TBC1D3BA6NDS4 549 aa23.59■■□□□ 1.37
PTP4A1-203ENST00000473334 GOLGA6L22H0YM25 854 aa23.59■■□□□ 1.37
PTP4A1-203ENST00000473334 GABBR2O75899 941 aa23.59■■□□□ 1.37
PTP4A1-203ENST00000473334 CHRM1P11229 460 aaPredicted RBP23.59■■□□□ 1.37
PTP4A1-203ENST00000473334 PON1P27169 355 aa23.59■■□□□ 1.37
PTP4A1-203ENST00000473334 TIE1P35590 1138 aa23.59■■□□□ 1.37
PTP4A1-203ENST00000473334 CHKAP35790 457 aa23.59■■□□□ 1.37
PTP4A1-203ENST00000473334 KIR2DL1P43626 348 aaPredicted RBP23.59■■□□□ 1.37
PTP4A1-203ENST00000473334 MEA1Q16626 185 aa23.59■■□□□ 1.37
PTP4A1-203ENST00000473334 GRAMD4Q6IC98 578 aa23.59■■□□□ 1.37
PTP4A1-203ENST00000473334 KIAA2013Q8IYS2 634 aa23.59■■□□□ 1.37
PTP4A1-203ENST00000473334 CCDC33Q8N5R6 958 aa23.59■■□□□ 1.37
PTP4A1-203ENST00000473334 EDEM1Q92611 657 aa23.59■■□□□ 1.37
PTP4A1-203ENST00000473334 PIK3R2O00459 728 aa23.58■■□□□ 1.37
PTP4A1-203ENST00000473334 AXIN1O15169 862 aa23.58■■□□□ 1.37
PTP4A1-203ENST00000473334 MED7O43513 233 aa23.58■■□□□ 1.37
PTP4A1-203ENST00000473334 FBXO21O94952 628 aa23.58■■□□□ 1.37
PTP4A1-203ENST00000473334 LETM1O95202 739 aaPredicted RBP23.58■■□□□ 1.37
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms