RNA–Protein interactions for RNA: ENST00000472648.1

SIK3-208, Transcript of SIK family kinase 3, humanhuman

TSL 3

Gene SIK3, Length 267 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIK3-208ENST00000472648 FUBP3Q96I24 572 aaKnown RBP eCLIP6.23□□□□□ -1.41
SIK3-208ENST00000472648 ZNF560Q96MR9 790 aa6.23□□□□□ -1.41
SIK3-208ENST00000472648 AIFM3Q96NN9 605 aa6.23□□□□□ -1.41
SIK3-208ENST00000472648 SLITRK1Q96PX8 696 aa6.23□□□□□ -1.41
SIK3-208ENST00000472648 ACBD6Q9BR61 282 aa6.23□□□□□ -1.41
SIK3-208ENST00000472648 ESYT1Q9BSJ8 1104 aa6.23□□□□□ -1.41
SIK3-208ENST00000472648 BBS2Q9BXC9 721 aa6.23□□□□□ -1.41
SIK3-208ENST00000472648 TRIM9Q9C026 710 aa6.23□□□□□ -1.41
SIK3-208ENST00000472648 CCSER1Q9C0I3 900 aa6.23□□□□□ -1.41
SIK3-208ENST00000472648 BTBD1Q9H0C5 482 aa6.23□□□□□ -1.41
SIK3-208ENST00000472648 SLC25A18Q9H1K4 315 aa6.23□□□□□ -1.41
SIK3-208ENST00000472648 LHX5Q9H2C1 402 aa6.23□□□□□ -1.41
SIK3-208ENST00000472648 BHMT2Q9H2M3 363 aa6.23□□□□□ -1.41
SIK3-208ENST00000472648 GDF3Q9NR23 364 aa6.23□□□□□ -1.41
SIK3-208ENST00000472648 DDX43Q9NXZ2 648 aaKnown RBP6.23□□□□□ -1.41
SIK3-208ENST00000472648 GTF3C4Q9UKN8 822 aa6.23□□□□□ -1.41
SIK3-208ENST00000472648 SATB2Q9UPW6 733 aa6.23□□□□□ -1.41
SIK3-208ENST00000472648 OTOGQ6ZRI0 2925 aa6.23□□□□□ -1.41
SIK3-208ENST00000472648 SETD2Q9BYW2 2564 aaPredicted RBP6.22□□□□□ -1.41
SIK3-208ENST00000472648 ZNF106Q9H2Y7 1883 aaKnown RBP6.22□□□□□ -1.41
SIK3-208ENST00000472648 KPNA7A9QM74 516 aa6.22□□□□□ -1.41
SIK3-208ENST00000472648 CYP26A1O43174 497 aa6.22□□□□□ -1.41
SIK3-208ENST00000472648 TSPAN3O60637 253 aa6.22□□□□□ -1.41
SIK3-208ENST00000472648 HIP1RO75146 1068 aa6.22□□□□□ -1.41
SIK3-208ENST00000472648 GJB6O95452 261 aa6.22□□□□□ -1.41
SIK3-208ENST00000472648 IRF1P10914 325 aa6.22□□□□□ -1.41
SIK3-208ENST00000472648 CPA1P15085 419 aa6.22□□□□□ -1.41
SIK3-208ENST00000472648 RPA1P27694 616 aa6.22□□□□□ -1.41
SIK3-208ENST00000472648 TNFRSF8P28908 595 aa6.22□□□□□ -1.41
SIK3-208ENST00000472648 MAGEA11P43364 429 aa6.22□□□□□ -1.41
SIK3-208ENST00000472648 COPAP53621 1224 aa6.22□□□□□ -1.41
SIK3-208ENST00000472648 USP46P62068 366 aa6.22□□□□□ -1.41
SIK3-208ENST00000472648 SKOR1P84550 965 aa6.22□□□□□ -1.41
SIK3-208ENST00000472648 IFRD2Q12894 506 aaPredicted RBP6.22□□□□□ -1.41
SIK3-208ENST00000472648 NCAPHQ15003 741 aa6.22□□□□□ -1.41
SIK3-208ENST00000472648 SHBQ15464 509 aa6.22□□□□□ -1.41
SIK3-208ENST00000472648 SKIDA1Q1XH10 827 aa6.22□□□□□ -1.41
SIK3-208ENST00000472648 FOXR1Q6PIV2 292 aa6.22□□□□□ -1.41
SIK3-208ENST00000472648 CPLX2Q6PUV4 134 aaKnown RBP6.22□□□□□ -1.41
SIK3-208ENST00000472648 IGF2-ASQ6U949 168 aa6.22□□□□□ -1.41
SIK3-208ENST00000472648 C4orf50Q6ZRC1 276 aa6.22□□□□□ -1.41
SIK3-208ENST00000472648 PTRH1Q86Y79 214 aaKnown RBP6.22□□□□□ -1.41
SIK3-208ENST00000472648 OXR1Q8N573 874 aa6.22□□□□□ -1.41
SIK3-208ENST00000472648 ZNF564Q8TBZ8 553 aaPredicted RBP6.22□□□□□ -1.41
SIK3-208ENST00000472648 UCMAQ8WVF2 138 aa6.22□□□□□ -1.41
SIK3-208ENST00000472648 HPS3Q969F9 1004 aa6.22□□□□□ -1.41
SIK3-208ENST00000472648 SPATA17Q96L03 361 aa6.22□□□□□ -1.41
SIK3-208ENST00000472648 CEP295NLQ96MC4 621 aa6.22□□□□□ -1.41
SIK3-208ENST00000472648 SLC6A18Q96N87 628 aa6.22□□□□□ -1.41
SIK3-208ENST00000472648 TTLL2Q9BWV7 592 aa6.22□□□□□ -1.41
SIK3-208ENST00000472648 NACA2Q9H009 215 aa6.22□□□□□ -1.41
SIK3-208ENST00000472648 UTP3Q9NQZ2 479 aaKnown RBP eCLIP6.22□□□□□ -1.41
SIK3-208ENST00000472648 AASDHPPTQ9NRN7 309 aa6.22□□□□□ -1.41
SIK3-208ENST00000472648 TMPRSS4Q9NRS4 437 aa6.22□□□□□ -1.41
SIK3-208ENST00000472648 WDR35Q9P2L0 1181 aa6.22□□□□□ -1.41
SIK3-208ENST00000472648 ORC3Q9UBD5 711 aaPredicted RBP6.22□□□□□ -1.41
SIK3-208ENST00000472648 MAGEC2Q9UBF1 373 aaPredicted RBP6.22□□□□□ -1.41
SIK3-208ENST00000472648 ATXN7L1Q9ULK2 861 aaPredicted RBP6.22□□□□□ -1.41
SIK3-208ENST00000472648 DERAQ9Y315 318 aa6.22□□□□□ -1.41
SIK3-208ENST00000472648 ADGRG4Q8IZF6 3080 aa6.22□□□□□ -1.41
SIK3-208ENST00000472648 ZFHX3Q15911 3703 aa6.21□□□□□ -1.41
SIK3-208ENST00000472648 MED13LQ71F56 2210 aa6.21□□□□□ -1.42
SIK3-208ENST00000472648 OGTO15294 1046 aa6.21□□□□□ -1.42
SIK3-208ENST00000472648 OPA1O60313 960 aa6.21□□□□□ -1.42
SIK3-208ENST00000472648 HUS1O60921 280 aa6.21□□□□□ -1.42
SIK3-208ENST00000472648 AGFG2O95081 481 aa6.21□□□□□ -1.42
SIK3-208ENST00000472648 IGHDP01880 384 aa6.21□□□□□ -1.42
SIK3-208ENST00000472648 EPHX1P07099 455 aa6.21□□□□□ -1.42
SIK3-208ENST00000472648 NEFLP07196 543 aa6.21□□□□□ -1.42
SIK3-208ENST00000472648 CD38P28907 300 aa6.21□□□□□ -1.42
SIK3-208ENST00000472648 PCSK1P29120 753 aa6.21□□□□□ -1.42
SIK3-208ENST00000472648 PNPLA4P41247 253 aa6.21□□□□□ -1.42
SIK3-208ENST00000472648 LIG4P49917 911 aa6.21□□□□□ -1.42
SIK3-208ENST00000472648 SMTNP53814 917 aa6.21□□□□□ -1.42
SIK3-208ENST00000472648 NOP14P78316 857 aaKnown RBP6.21□□□□□ -1.42
SIK3-208ENST00000472648 CYP27A1Q02318 531 aa6.21□□□□□ -1.42
SIK3-208ENST00000472648 ARID5AQ03989 594 aa6.21□□□□□ -1.42
SIK3-208ENST00000472648 TAF10Q12962 218 aa6.21□□□□□ -1.42
SIK3-208ENST00000472648 BNIP3Q12983 259 aa6.21□□□□□ -1.42
SIK3-208ENST00000472648 CCDC142Q17RM4 750 aa6.21□□□□□ -1.42
SIK3-208ENST00000472648 PROX2Q3B8N5 592 aa6.21□□□□□ -1.42
SIK3-208ENST00000472648 TTC31Q49AM3 519 aaPredicted RBP6.21□□□□□ -1.42
SIK3-208ENST00000472648 SLC45A4Q5BKX6 768 aa6.21□□□□□ -1.42
SIK3-208ENST00000472648 EARS2Q5JPH6 523 aaKnown RBP6.21□□□□□ -1.42
SIK3-208ENST00000472648 SFMBT2Q5VUG0 894 aa6.21□□□□□ -1.42
SIK3-208ENST00000472648 CDCP2Q5VXM1 449 aa6.21□□□□□ -1.42
SIK3-208ENST00000472648 TDRD10Q5VZ19 366 aaKnown RBP6.21□□□□□ -1.42
SIK3-208ENST00000472648 HAUS3Q68CZ6 603 aa6.21□□□□□ -1.42
SIK3-208ENST00000472648 BLOC1S2Q6QNY1 142 aa6.21□□□□□ -1.42
SIK3-208ENST00000472648 VSTM1Q6UX27 236 aa6.21□□□□□ -1.42
SIK3-208ENST00000472648 SERPINA13PQ6UXR4 307 aa6.21□□□□□ -1.42
SIK3-208ENST00000472648 TPGS1Q6ZTW0 290 aa6.21□□□□□ -1.42
SIK3-208ENST00000472648 ATCAYQ86WG3 371 aa6.21□□□□□ -1.42
SIK3-208ENST00000472648 RASEFQ8IZ41 740 aa6.21□□□□□ -1.42
SIK3-208ENST00000472648 TMEM86AQ8N2M4 240 aa6.21□□□□□ -1.42
SIK3-208ENST00000472648 PDCL2Q8N4E4 241 aa6.21□□□□□ -1.42
SIK3-208ENST00000472648 ARL14Q8N4G2 192 aa6.21□□□□□ -1.42
SIK3-208ENST00000472648 ZSCAN1Q8NBB4 408 aa6.21□□□□□ -1.42
SIK3-208ENST00000472648 SPATA20Q8TB22 786 aa6.21□□□□□ -1.42
SIK3-208ENST00000472648 BHMTQ93088 406 aa6.21□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms