RNA–Protein interactions for RNA: ENST00000471894.1

PUM1-208, Transcript of pumilio RNA binding family member 1, human

TSL 3

Gene PUM1, Length 812 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PUM1-208	ENST00000471894	TRUB2	O95900	331 aa	Known RBP	10.99	□□□□□ -0.65
PUM1-208	ENST00000471894	F9	P00740	461 aa		10.99	□□□□□ -0.65
PUM1-208	ENST00000471894	F11	P03951	625 aa		10.99	□□□□□ -0.65
PUM1-208	ENST00000471894	TFE3	P19532	575 aa	Predicted RBP	10.99	□□□□□ -0.65
PUM1-208	ENST00000471894	IGFBP4	P22692	258 aa		10.99	□□□□□ -0.65
PUM1-208	ENST00000471894	GABRR2	P28476	465 aa		10.99	□□□□□ -0.65
PUM1-208	ENST00000471894	DNA2	P51530	1060 aa		10.99	□□□□□ -0.65
PUM1-208	ENST00000471894	PITX1	P78337	314 aa	Predicted RBP	10.99	□□□□□ -0.65
PUM1-208	ENST00000471894	DEUP1	Q05D60	604 aa		10.99	□□□□□ -0.65
PUM1-208	ENST00000471894	HYAL1	Q12794	435 aa		10.99	□□□□□ -0.65
PUM1-208	ENST00000471894	NME3	Q13232	169 aa		10.99	□□□□□ -0.65
PUM1-208	ENST00000471894	KCNC3	Q14003	757 aa		10.99	□□□□□ -0.65
PUM1-208	ENST00000471894	C10orf120	Q5SQS8	335 aa		10.99	□□□□□ -0.65
PUM1-208	ENST00000471894	HECTD3	Q5T447	861 aa		10.99	□□□□□ -0.65
PUM1-208	ENST00000471894	SNX30	Q5VWJ9	437 aa		10.99	□□□□□ -0.65
PUM1-208	ENST00000471894	DAB2IP	Q5VWQ8	1189 aa		10.99	□□□□□ -0.65
PUM1-208	ENST00000471894	SND1	Q7KZF4	910 aa	Known RBP eCLIP	10.99	□□□□□ -0.65
PUM1-208	ENST00000471894	STRADA	Q7RTN6	431 aa		10.99	□□□□□ -0.65
PUM1-208	ENST00000471894	TADA2B	Q86TJ2	420 aa		10.99	□□□□□ -0.65
PUM1-208	ENST00000471894	ARFGAP1	Q8N6T3	406 aa		10.99	□□□□□ -0.65
PUM1-208	ENST00000471894	EFHB	Q8N7U6	833 aa		10.99	□□□□□ -0.65
PUM1-208	ENST00000471894	C12orf76	Q8N812	135 aa	Predicted RBP	10.99	□□□□□ -0.65
PUM1-208	ENST00000471894	VN1R2	Q8NFZ6	395 aa		10.99	□□□□□ -0.65
PUM1-208	ENST00000471894	ADAM32	Q8TC27	787 aa		10.99	□□□□□ -0.65
PUM1-208	ENST00000471894	DQX1	Q8TE96	717 aa	Known RBP	10.99	□□□□□ -0.65
PUM1-208	ENST00000471894	CENPI	Q92674	756 aa	Predicted RBP	10.99	□□□□□ -0.65
PUM1-208	ENST00000471894	NT5C3B	Q969T7	300 aa		10.99	□□□□□ -0.65
PUM1-208	ENST00000471894	LRCH3	Q96II8	777 aa		10.99	□□□□□ -0.65
PUM1-208	ENST00000471894	FAM161B	Q96MY7	647 aa		10.99	□□□□□ -0.65
PUM1-208	ENST00000471894	GCNA	Q96QF7	691 aa		10.99	□□□□□ -0.65
PUM1-208	ENST00000471894	CDK5RAP1	Q96SZ6	601 aa	Known RBP	10.99	□□□□□ -0.65
PUM1-208	ENST00000471894	PRKD2	Q9BZL6	878 aa		10.99	□□□□□ -0.65
PUM1-208	ENST00000471894	ATXN3L	Q9H3M9	355 aa		10.99	□□□□□ -0.65
PUM1-208	ENST00000471894	FAM204A	Q9H8W3	233 aa		10.99	□□□□□ -0.65
PUM1-208	ENST00000471894	ASAH2	Q9NR71	780 aa		10.99	□□□□□ -0.65
PUM1-208	ENST00000471894	OLA1	Q9NTK5	396 aa	Known RBP	10.99	□□□□□ -0.65
PUM1-208	ENST00000471894	DZANK1	Q9NVP4	752 aa		10.99	□□□□□ -0.65
PUM1-208	ENST00000471894	MTPAP	Q9NVV4	582 aa	Known RBP eCLIP	10.99	□□□□□ -0.65
PUM1-208	ENST00000471894	HCFC1R1	Q9NWW0	138 aa		10.99	□□□□□ -0.65
PUM1-208	ENST00000471894	FAM120A	Q9NZB2	1118 aa	Known RBP eCLIP	10.99	□□□□□ -0.65
PUM1-208	ENST00000471894	COX16	Q9P0S2	106 aa		10.99	□□□□□ -0.65
PUM1-208	ENST00000471894	DNMT3B	Q9UBC3	853 aa	Known RBP	10.99	□□□□□ -0.65
PUM1-208	ENST00000471894	PCSK1N	Q9UHG2	260 aa		10.99	□□□□□ -0.65
PUM1-208	ENST00000471894	SFMBT1	Q9UHJ3	866 aa		10.99	□□□□□ -0.65
PUM1-208	ENST00000471894	PACSIN2	Q9UNF0	486 aa	Predicted RBP	10.99	□□□□□ -0.65
PUM1-208	ENST00000471894	SBDS	Q9Y3A5	250 aa	Known RBP eCLIP	10.99	□□□□□ -0.65
PUM1-208	ENST00000471894	MIF4GD	A9UHW6	222 aa	Known RBP	10.98	□□□□□ -0.65
PUM1-208	ENST00000471894	PRPSAP2	O60256	369 aa		10.98	□□□□□ -0.65
PUM1-208	ENST00000471894	TLR5	O60602	858 aa		10.98	□□□□□ -0.65
PUM1-208	ENST00000471894	LRCH4	O75427	683 aa		10.98	□□□□□ -0.65
PUM1-208	ENST00000471894	ENDOD1	O94919	500 aa		10.98	□□□□□ -0.65
PUM1-208	ENST00000471894	FGF19	O95750	216 aa		10.98	□□□□□ -0.65
PUM1-208	ENST00000471894	TBX18	O95935	607 aa		10.98	□□□□□ -0.65
PUM1-208	ENST00000471894	ATP1A1	P05023	1023 aa	Known RBP	10.98	□□□□□ -0.65
PUM1-208	ENST00000471894	SRGAP2B	P0DMP2	458 aa		10.98	□□□□□ -0.65
PUM1-208	ENST00000471894	MIP	P30301	263 aa		10.98	□□□□□ -0.65
PUM1-208	ENST00000471894	CDC25C	P30307	473 aa		10.98	□□□□□ -0.65
PUM1-208	ENST00000471894	RDX	P35241	583 aa	Known RBP	10.98	□□□□□ -0.65
PUM1-208	ENST00000471894	PCK1	P35558	622 aa		10.98	□□□□□ -0.65
PUM1-208	ENST00000471894	GJC1	P36383	396 aa		10.98	□□□□□ -0.65
PUM1-208	ENST00000471894	ATP5C1	P36542	298 aa	Known RBP	10.98	□□□□□ -0.65
PUM1-208	ENST00000471894	HDAC4	P56524	1084 aa		10.98	□□□□□ -0.65
PUM1-208	ENST00000471894	TAS2R40	P59535	323 aa		10.98	□□□□□ -0.65
PUM1-208	ENST00000471894	EFEMP1	Q12805	493 aa		10.98	□□□□□ -0.65
PUM1-208	ENST00000471894	RAB6C	Q53S08	254 aa		10.98	□□□□□ -0.65
PUM1-208	ENST00000471894	ZFYVE27	Q5T4F4	411 aa		10.98	□□□□□ -0.65
PUM1-208	ENST00000471894	MSANTD2	Q6P1R3	559 aa		10.98	□□□□□ -0.65
PUM1-208	ENST00000471894	TMC5	Q6UXY8	1006 aa		10.98	□□□□□ -0.65
PUM1-208	ENST00000471894	TMEM184A	Q6ZMB5	413 aa		10.98	□□□□□ -0.65
PUM1-208	ENST00000471894	PDZD4	Q76G19	769 aa	Predicted RBP	10.98	□□□□□ -0.65
PUM1-208	ENST00000471894	TMEM150A	Q86TG1	271 aa		10.98	□□□□□ -0.65
PUM1-208	ENST00000471894	TMC8	Q8IU68	726 aa		10.98	□□□□□ -0.65
PUM1-208	ENST00000471894	RHOT1	Q8IXI2	618 aa		10.98	□□□□□ -0.65
PUM1-208	ENST00000471894	ZNF276	Q8N554	614 aa		10.98	□□□□□ -0.65
PUM1-208	ENST00000471894	UBL4B	Q8N7F7	174 aa		10.98	□□□□□ -0.65
PUM1-208	ENST00000471894	LEMD2	Q8NC56	503 aa		10.98	□□□□□ -0.65
PUM1-208	ENST00000471894	KIF18A	Q8NI77	898 aa		10.98	□□□□□ -0.65
PUM1-208	ENST00000471894	SMG7	Q92540	1137 aa	Known RBP	10.98	□□□□□ -0.65
PUM1-208	ENST00000471894	MRPS31	Q92665	395 aa	Known RBP	10.98	□□□□□ -0.65
PUM1-208	ENST00000471894	RNF34	Q969K3	372 aa		10.98	□□□□□ -0.65
PUM1-208	ENST00000471894	HES6	Q96HZ4	224 aa		10.98	□□□□□ -0.65
PUM1-208	ENST00000471894	GAS2L1	Q99501	681 aa	Predicted RBP	10.98	□□□□□ -0.65
PUM1-208	ENST00000471894	TLR10	Q9BXR5	811 aa		10.98	□□□□□ -0.65
PUM1-208	ENST00000471894	LRRC3	Q9BY71	257 aa		10.98	□□□□□ -0.65
PUM1-208	ENST00000471894	NACA2	Q9H009	215 aa		10.98	□□□□□ -0.65
PUM1-208	ENST00000471894	RAB6C	Q9H0N0	254 aa		10.98	□□□□□ -0.65
PUM1-208	ENST00000471894	CCSER2	Q9H7U1	834 aa		10.98	□□□□□ -0.65
PUM1-208	ENST00000471894	ZWILCH	Q9H900	591 aa		10.98	□□□□□ -0.65
PUM1-208	ENST00000471894	SFXN1	Q9H9B4	322 aa		10.98	□□□□□ -0.65
PUM1-208	ENST00000471894	IL21	Q9HBE4	155 aa		10.98	□□□□□ -0.65
PUM1-208	ENST00000471894	DDIT4	Q9NX09	232 aa		10.98	□□□□□ -0.65
PUM1-208	ENST00000471894	MARCH2	Q9P0N8	246 aa		10.98	□□□□□ -0.65
PUM1-208	ENST00000471894	RASAL2	Q9UJF2	1139 aa		10.98	□□□□□ -0.65
PUM1-208	ENST00000471894	DNMT3L	Q9UJW3	386 aa		10.98	□□□□□ -0.65
PUM1-208	ENST00000471894	USP18	Q9UMW8	372 aa		10.98	□□□□□ -0.65
PUM1-208	ENST00000471894	PCDHA3	Q9Y5H8	950 aa		10.98	□□□□□ -0.65
PUM1-208	ENST00000471894	MTCH2	Q9Y6C9	303 aa		10.98	□□□□□ -0.65
PUM1-208	ENST00000471894	LAMA3	Q16787	3333 aa		10.98	□□□□□ -0.65
PUM1-208	ENST00000471894	TRANK1	O15050	2925 aa		10.98	□□□□□ -0.65
PUM1-208	ENST00000471894	DOCK6	Q96HP0	2047 aa		10.97	□□□□□ -0.65

Retrieved 100 of 20,778 RNA–protein pairs in 59.9 ms