RNA–Protein interactions for RNA: ENST00000471322.2

HSPG2-208, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 5

Gene HSPG2, Length 1,602 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-208ENST00000471322 CLEC1BQ9P126 229 aa18.26■□□□□ 0.51
HSPG2-208ENST00000471322 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP18.25■□□□□ 0.51
HSPG2-208ENST00000471322 ESYT3A0FGR9 886 aa18.25■□□□□ 0.51
HSPG2-208ENST00000471322 ZSCAN5CA6NGD5 496 aaPredicted RBP18.25■□□□□ 0.51
HSPG2-208ENST00000471322 FAM200BP0CF97 657 aa18.25■□□□□ 0.51
HSPG2-208ENST00000471322 SDC4P31431 198 aa18.25■□□□□ 0.51
HSPG2-208ENST00000471322 CDR1P51861 262 aa18.25■□□□□ 0.51
HSPG2-208ENST00000471322 HLTFQ14527 1009 aaKnown RBP eCLIP18.25■□□□□ 0.51
HSPG2-208ENST00000471322 MDH1BQ5I0G3 518 aa18.25■□□□□ 0.51
HSPG2-208ENST00000471322 EFHC1Q5JVL4 640 aa18.25■□□□□ 0.51
HSPG2-208ENST00000471322 VARS2Q5ST30 1063 aaKnown RBP18.25■□□□□ 0.51
HSPG2-208ENST00000471322 DUPD1Q68J44 220 aa18.25■□□□□ 0.51
HSPG2-208ENST00000471322 SPOCD1Q6ZMY3 1216 aa18.25■□□□□ 0.51
HSPG2-208ENST00000471322 SND1Q7KZF4 910 aaKnown RBP eCLIP18.25■□□□□ 0.511e-7■■■□□ 17.5
HSPG2-208ENST00000471322 ARFGAP1Q8N6T3 406 aa18.25■□□□□ 0.51
HSPG2-208ENST00000471322 MYCBPAPQ8TBZ2 947 aa18.25■□□□□ 0.51
HSPG2-208ENST00000471322 PIK3R5Q8WYR1 880 aa18.25■□□□□ 0.51
HSPG2-208ENST00000471322 CDCA3Q99618 268 aaPredicted RBP18.25■□□□□ 0.51
HSPG2-208ENST00000471322 ACBD6Q9BR61 282 aa18.25■□□□□ 0.51
HSPG2-208ENST00000471322 HEMGNQ9BXL5 484 aa18.25■□□□□ 0.51
HSPG2-208ENST00000471322 UBXN6Q9BZV1 441 aa18.25■□□□□ 0.51
HSPG2-208ENST00000471322 PIK3R2O00459 728 aa18.24■□□□□ 0.51
HSPG2-208ENST00000471322 ATP2C2O75185 946 aa18.24■□□□□ 0.51
HSPG2-208ENST00000471322 ECEL1O95672 775 aa18.24■□□□□ 0.51
HSPG2-208ENST00000471322 TRUB2O95900 331 aaKnown RBP18.24■□□□□ 0.51
HSPG2-208ENST00000471322 TCF4P15884 667 aa18.24■□□□□ 0.51
HSPG2-208ENST00000471322 TYMPP19971 482 aa18.24■□□□□ 0.51
HSPG2-208ENST00000471322 ACAT1P24752 427 aaKnown RBP18.24■□□□□ 0.51
HSPG2-208ENST00000471322 MIPP30301 263 aa18.24■□□□□ 0.51
HSPG2-208ENST00000471322 CLCN4P51793 760 aa18.24■□□□□ 0.51
HSPG2-208ENST00000471322 ARPP19P56211 112 aa18.24■□□□□ 0.51
HSPG2-208ENST00000471322 LMNB2Q03252 620 aa18.24■□□□□ 0.51
HSPG2-208ENST00000471322 KCNC3Q14003 757 aa18.24■□□□□ 0.51
HSPG2-208ENST00000471322 COL19A1Q14993 1142 aa18.24■□□□□ 0.51
HSPG2-208ENST00000471322 ATP13A4Q4VNC1 1196 aa18.24■□□□□ 0.51
HSPG2-208ENST00000471322 BOLA3Q53S33 107 aa18.24■□□□□ 0.51
HSPG2-208ENST00000471322 MFSD7Q6UXD7 560 aa18.24■□□□□ 0.51
HSPG2-208ENST00000471322 GSPT2Q8IYD1 628 aaKnown RBP18.24■□□□□ 0.51
HSPG2-208ENST00000471322 THEM5Q8N1Q8 247 aa18.24■□□□□ 0.51
HSPG2-208ENST00000471322 CMASQ8NFW8 434 aaPredicted RBP18.24■□□□□ 0.51
HSPG2-208ENST00000471322 ATL2Q8NHH9 583 aa18.24■□□□□ 0.51
HSPG2-208ENST00000471322 CLSTN3Q9BQT9 956 aa18.24■□□□□ 0.51
HSPG2-208ENST00000471322 FAM129AQ9BZQ8 928 aa18.24■□□□□ 0.51
HSPG2-208ENST00000471322 DCLK3Q9C098 648 aa18.24■□□□□ 0.51
HSPG2-208ENST00000471322 PLEKHA4Q9H4M7 779 aa18.24■□□□□ 0.51
HSPG2-208ENST00000471322 USP18Q9UMW8 372 aa18.24■□□□□ 0.51
HSPG2-208ENST00000471322 SSX2IPQ9Y2D8 614 aa18.24■□□□□ 0.51
HSPG2-208ENST00000471322 LRRD1A4D1F6 860 aa18.23■□□□□ 0.51
HSPG2-208ENST00000471322 DAPK3O43293 454 aa18.23■□□□□ 0.51
HSPG2-208ENST00000471322 ADH1AP07327 375 aa18.23■□□□□ 0.51
HSPG2-208ENST00000471322 OR1D2P34982 312 aa18.23■□□□□ 0.51
HSPG2-208ENST00000471322 CDKN2BP42772 138 aa18.23■□□□□ 0.51
HSPG2-208ENST00000471322 PTPN9P43378 593 aa18.23■□□□□ 0.51
HSPG2-208ENST00000471322 MAPRE1Q15691 268 aaKnown RBP18.23■□□□□ 0.51
HSPG2-208ENST00000471322 TTC27Q6P3X3 843 aa18.23■□□□□ 0.51
HSPG2-208ENST00000471322 PIGZQ86VD9 579 aa18.23■□□□□ 0.51
HSPG2-208ENST00000471322 C12orf76Q8N812 135 aaPredicted RBP18.23■□□□□ 0.51
HSPG2-208ENST00000471322 C1orf54Q8WWF1 131 aa18.23■□□□□ 0.51
HSPG2-208ENST00000471322 RAPGEF5Q92565 580 aa18.23■□□□□ 0.51
HSPG2-208ENST00000471322 KHSRPQ92945 711 aaKnown RBP eCLIP18.23■□□□□ 0.51
HSPG2-208ENST00000471322 B3GNT5Q9BYG0 378 aa18.23■□□□□ 0.51
HSPG2-208ENST00000471322 FRMD8P1Q9BZ68 369 aaPredicted RBP18.23■□□□□ 0.51
HSPG2-208ENST00000471322 LRRC4Q9HBW1 653 aa18.23■□□□□ 0.51
HSPG2-208ENST00000471322 RXFP1Q9HBX9 757 aa18.23■□□□□ 0.51
HSPG2-208ENST00000471322 CRTAC1Q9NQ79 661 aa18.23■□□□□ 0.51
HSPG2-208ENST00000471322 CDH22Q9UJ99 828 aa18.23■□□□□ 0.51
HSPG2-208ENST00000471322 CDY1Q9Y6F8 540 aa18.23■□□□□ 0.51
HSPG2-208ENST00000471322 hCG_1818297A0A087WSY0 165 aa18.23■□□□□ 0.51
HSPG2-208ENST00000471322 PRPSAP2O60256 369 aa18.23■□□□□ 0.51
HSPG2-208ENST00000471322 GABBR2O75899 941 aa18.23■□□□□ 0.51
HSPG2-208ENST00000471322 FBXO21O94952 628 aa18.23■□□□□ 0.51
HSPG2-208ENST00000471322 GAS8O95995 478 aa18.23■□□□□ 0.51
HSPG2-208ENST00000471322 LCP1P13796 627 aa18.23■□□□□ 0.51
HSPG2-208ENST00000471322 FLT3P36888 993 aa18.23■□□□□ 0.51
HSPG2-208ENST00000471322 TAZQ16635 292 aa18.23■□□□□ 0.51
HSPG2-208ENST00000471322 CCDC14Q49A88 953 aa18.23■□□□□ 0.51
HSPG2-208ENST00000471322 DRICH1Q6PGQ1 229 aaPredicted RBP18.23■□□□□ 0.51
HSPG2-208ENST00000471322 PAQR9Q6ZVX9 377 aa18.23■□□□□ 0.51
HSPG2-208ENST00000471322 MREGQ8N565 214 aa18.23■□□□□ 0.51
HSPG2-208ENST00000471322 KCTD6Q8NC69 237 aa18.23■□□□□ 0.51
HSPG2-208ENST00000471322 SLC22A17Q8WUG5 538 aa18.23■□□□□ 0.51
HSPG2-208ENST00000471322 TBCBQ99426 244 aa18.23■□□□□ 0.51
HSPG2-208ENST00000471322 ZWILCHQ9H900 591 aa18.23■□□□□ 0.51
HSPG2-208ENST00000471322 PCDHB8Q9UN66 801 aa18.23■□□□□ 0.51
HSPG2-208ENST00000471322 SPDYE4A6NLX3 237 aa18.22■□□□□ 0.51
HSPG2-208ENST00000471322 PI4K2BG5E9Z4 385 aa18.22■□□□□ 0.51
HSPG2-208ENST00000471322 SYN3O14994 580 aa18.22■□□□□ 0.51
HSPG2-208ENST00000471322 TGM5O43548 720 aa18.22■□□□□ 0.51
HSPG2-208ENST00000471322 HSF2BPO75031 334 aa18.22■□□□□ 0.51
HSPG2-208ENST00000471322 KDELR1P24390 212 aa18.22■□□□□ 0.51
HSPG2-208ENST00000471322 IL1R2P27930 398 aa18.22■□□□□ 0.51
HSPG2-208ENST00000471322 PPP1R7Q15435 360 aa18.22■□□□□ 0.51
HSPG2-208ENST00000471322 CTXN3Q4LDR2 81 aa18.22■□□□□ 0.51
HSPG2-208ENST00000471322 ALS2CLQ60I27 953 aa18.22■□□□□ 0.51
HSPG2-208ENST00000471322 TXNRD3NBQ6F5E7 133 aa18.22■□□□□ 0.51
HSPG2-208ENST00000471322 ANKS3Q6ZW76 656 aa18.22■□□□□ 0.51
HSPG2-208ENST00000471322 MAP7D3Q8IWC1 876 aa18.22■□□□□ 0.51
HSPG2-208ENST00000471322 TTC13Q8NBP0 860 aa18.22■□□□□ 0.51
HSPG2-208ENST00000471322 TEKT4Q8WW24 435 aa18.22■□□□□ 0.51
HSPG2-208ENST00000471322 LRRC45Q96CN5 670 aa18.22■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms