RNA–Protein interactions for RNA: ENST00000470232.1

SYNGAP1-205, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 3

Gene SYNGAP1, Length 394 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-205ENST00000470232 CEBPZQ03701 1054 aaKnown RBP9.45□□□□□ -0.9
SYNGAP1-205ENST00000470232 MYO1EQ12965 1108 aa9.45□□□□□ -0.9
SYNGAP1-205ENST00000470232 SF3A1Q15459 793 aaKnown RBP9.45□□□□□ -0.9
SYNGAP1-205ENST00000470232 HYIQ5T013 277 aa9.45□□□□□ -0.9
SYNGAP1-205ENST00000470232 DCAF12L1Q5VU92 463 aa9.45□□□□□ -0.9
SYNGAP1-205ENST00000470232 KCNK18Q7Z418 384 aa9.45□□□□□ -0.9
SYNGAP1-205ENST00000470232 MARCH9Q86YJ5 346 aa9.45□□□□□ -0.9
SYNGAP1-205ENST00000470232 ADGRF2Q8IZF7 708 aa9.45□□□□□ -0.9
SYNGAP1-205ENST00000470232 CSGALNACT2Q8N6G5 542 aa9.45□□□□□ -0.9
SYNGAP1-205ENST00000470232 EFCAB3Q8N7B9 438 aa9.45□□□□□ -0.9
SYNGAP1-205ENST00000470232 PDZD8Q8NEN9 1154 aa9.45□□□□□ -0.9
SYNGAP1-205ENST00000470232 WBP1Q96G27 269 aa9.45□□□□□ -0.9
SYNGAP1-205ENST00000470232 MRGPRX1Q96LB2 322 aa9.45□□□□□ -0.9
SYNGAP1-205ENST00000470232 PKMYT1Q99640 499 aa9.45□□□□□ -0.9
SYNGAP1-205ENST00000470232 GABRG3Q99928 467 aa9.45□□□□□ -0.9
SYNGAP1-205ENST00000470232 DUSP9Q99956 384 aaKnown RBP9.45□□□□□ -0.9
SYNGAP1-205ENST00000470232 NUP58Q9BVL2 599 aa9.45□□□□□ -0.9
SYNGAP1-205ENST00000470232 TTLL2Q9BWV7 592 aa9.45□□□□□ -0.9
SYNGAP1-205ENST00000470232 KCNF1Q9H3M0 494 aa9.45□□□□□ -0.9
SYNGAP1-205ENST00000470232 ITM2CQ9NQX7 267 aa9.45□□□□□ -0.9
SYNGAP1-205ENST00000470232 DNAJC17Q9NVM6 304 aaKnown RBP9.45□□□□□ -0.9
SYNGAP1-205ENST00000470232 FAM13BQ9NYF5 915 aa9.45□□□□□ -0.9
SYNGAP1-205ENST00000470232 WDR35Q9P2L0 1181 aa9.45□□□□□ -0.9
SYNGAP1-205ENST00000470232 RCOR1Q9UKL0 485 aa9.45□□□□□ -0.9
SYNGAP1-205ENST00000470232 ITGA11Q9UKX5 1188 aa9.45□□□□□ -0.9
SYNGAP1-205ENST00000470232 PYCARDQ9ULZ3 195 aa9.45□□□□□ -0.9
SYNGAP1-205ENST00000470232 FNDC3AQ9Y2H6 1198 aaKnown RBP9.45□□□□□ -0.9
SYNGAP1-205ENST00000470232 CFAP46Q8IYW2 2715 aa9.45□□□□□ -0.9
SYNGAP1-205ENST00000470232 NPHP3-ACAD11A0A0J9YXS1 232 aa9.44□□□□□ -0.9
SYNGAP1-205ENST00000470232 PP2D1A8MPX8 630 aa9.44□□□□□ -0.9
SYNGAP1-205ENST00000470232 METTL12A8MUP2 240 aa9.44□□□□□ -0.9
SYNGAP1-205ENST00000470232 GOLGA6L19H0YKK7 550 aa9.44□□□□□ -0.9
SYNGAP1-205ENST00000470232 GABRDO14764 452 aa9.44□□□□□ -0.9
SYNGAP1-205ENST00000470232 SCAMP3O14828 347 aaKnown RBP9.44□□□□□ -0.9
SYNGAP1-205ENST00000470232 NPC1O15118 1278 aa9.44□□□□□ -0.9
SYNGAP1-205ENST00000470232 DFNA5O60443 496 aa9.44□□□□□ -0.9
SYNGAP1-205ENST00000470232 LDHAP00338 332 aaKnown RBP9.44□□□□□ -0.9
SYNGAP1-205ENST00000470232 ITGB3P05106 788 aa9.44□□□□□ -0.9
SYNGAP1-205ENST00000470232 KRT18P05783 430 aaKnown RBP9.44□□□□□ -0.9
SYNGAP1-205ENST00000470232 KRT19P08727 400 aa9.44□□□□□ -0.9
SYNGAP1-205ENST00000470232 C1SP09871 688 aa9.44□□□□□ -0.9
SYNGAP1-205ENST00000470232 GTF2BQ00403 316 aa9.44□□□□□ -0.9
SYNGAP1-205ENST00000470232 TAF10Q12962 218 aa9.44□□□□□ -0.9
SYNGAP1-205ENST00000470232 STX1AQ16623 288 aa9.44□□□□□ -0.9
SYNGAP1-205ENST00000470232 PTPRNQ16849 979 aa9.44□□□□□ -0.9
SYNGAP1-205ENST00000470232 HECTD3Q5T447 861 aa9.44□□□□□ -0.9
SYNGAP1-205ENST00000470232 EGFLAMQ63HQ2 1017 aa9.44□□□□□ -0.9
SYNGAP1-205ENST00000470232 DHRS13Q6UX07 377 aa9.44□□□□□ -0.9
SYNGAP1-205ENST00000470232 MTERF4Q7Z6M4 381 aaKnown RBP9.44□□□□□ -0.9
SYNGAP1-205ENST00000470232 OVCA2Q8WZ82 227 aa9.44□□□□□ -0.9
SYNGAP1-205ENST00000470232 POMGNT1Q8WZA1 660 aa9.44□□□□□ -0.9
SYNGAP1-205ENST00000470232 C8orf48Q96LL4 319 aa9.44□□□□□ -0.9
SYNGAP1-205ENST00000470232 SYT15Q9BQS2 421 aa9.44□□□□□ -0.9
SYNGAP1-205ENST00000470232 MMTAG2Q9BU76 263 aaKnown RBP9.44□□□□□ -0.9
SYNGAP1-205ENST00000470232 TRIM5Q9C035 493 aa9.44□□□□□ -0.9
SYNGAP1-205ENST00000470232 NRSN2Q9GZP1 204 aa9.44□□□□□ -0.9
SYNGAP1-205ENST00000470232 PCED1AQ9H1Q7 454 aa9.44□□□□□ -0.9
SYNGAP1-205ENST00000470232 UTP3Q9NQZ2 479 aaKnown RBP eCLIP9.44□□□□□ -0.93e-27■■■■■ 503.1
SYNGAP1-205ENST00000470232 FTSJ1Q9UET6 329 aa9.44□□□□□ -0.9
SYNGAP1-205ENST00000470232 PCDHGA1Q9Y5H4 931 aa9.44□□□□□ -0.9
SYNGAP1-205ENST00000470232 A0A1B0GVT2 93 aa9.43□□□□□ -0.9
SYNGAP1-205ENST00000470232 ANKRD63C9JTQ0 380 aa9.43□□□□□ -0.9
SYNGAP1-205ENST00000470232 PCDHGA12O60330 932 aa9.43□□□□□ -0.9
SYNGAP1-205ENST00000470232 SYNCRIPO60506 623 aaKnown RBP9.43□□□□□ -0.9
SYNGAP1-205ENST00000470232 RTN3O95197 1032 aaPredicted RBP9.43□□□□□ -0.9
SYNGAP1-205ENST00000470232 PLCG1P19174 1290 aa9.43□□□□□ -0.9
SYNGAP1-205ENST00000470232 YWHAQP27348 245 aa9.43□□□□□ -0.9
SYNGAP1-205ENST00000470232 CDC25BP30305 580 aa9.43□□□□□ -0.9
SYNGAP1-205ENST00000470232 ACTN2P35609 894 aa9.43□□□□□ -0.9
SYNGAP1-205ENST00000470232 CSNK1EP49674 416 aaKnown RBP9.43□□□□□ -0.9
SYNGAP1-205ENST00000470232 ZNF165P49910 485 aa9.43□□□□□ -0.9
SYNGAP1-205ENST00000470232 CCT8P50990 548 aa9.43□□□□□ -0.9
SYNGAP1-205ENST00000470232 USP46P62068 366 aa9.43□□□□□ -0.9
SYNGAP1-205ENST00000470232 RHDQ02161 417 aa9.43□□□□□ -0.9
SYNGAP1-205ENST00000470232 ORC1Q13415 861 aa9.43□□□□□ -0.9
SYNGAP1-205ENST00000470232 ARSHQ5FYA8 562 aa9.43□□□□□ -0.9
SYNGAP1-205ENST00000470232 SLC39A4Q6P5W5 647 aa9.43□□□□□ -0.9
SYNGAP1-205ENST00000470232 OSTM1Q86WC4 334 aa9.43□□□□□ -0.9
SYNGAP1-205ENST00000470232 TMEM25Q86YD3 366 aa9.43□□□□□ -0.9
SYNGAP1-205ENST00000470232 MIB1Q86YT6 1006 aa9.43□□□□□ -0.9
SYNGAP1-205ENST00000470232 C1orf127Q8N9H9 656 aa9.43□□□□□ -0.9
SYNGAP1-205ENST00000470232 KIAA1524Q8TCG1 905 aa9.43□□□□□ -0.9
SYNGAP1-205ENST00000470232 UCMAQ8WVF2 138 aa9.43□□□□□ -0.9
SYNGAP1-205ENST00000470232 PRCCQ92733 491 aaPredicted RBP9.43□□□□□ -0.9
SYNGAP1-205ENST00000470232 FGF11Q92914 225 aa9.43□□□□□ -0.9
SYNGAP1-205ENST00000470232 IGSF8Q969P0 613 aa9.43□□□□□ -0.9
SYNGAP1-205ENST00000470232 MYLPFQ96A32 169 aa9.43□□□□□ -0.9
SYNGAP1-205ENST00000470232 ERLEC1Q96DZ1 483 aa9.43□□□□□ -0.9
SYNGAP1-205ENST00000470232 SIPA1Q96FS4 1042 aa9.43□□□□□ -0.9
SYNGAP1-205ENST00000470232 USP28Q96RU2 1077 aa9.43□□□□□ -0.9
SYNGAP1-205ENST00000470232 ACOX2Q99424 681 aa9.43□□□□□ -0.9
SYNGAP1-205ENST00000470232 PLIN2Q99541 437 aa9.43□□□□□ -0.9
SYNGAP1-205ENST00000470232 ARID3AQ99856 593 aa9.43□□□□□ -0.9
SYNGAP1-205ENST00000470232 REEP2Q9BRK0 252 aa9.43□□□□□ -0.9
SYNGAP1-205ENST00000470232 NACA2Q9H009 215 aa9.43□□□□□ -0.9
SYNGAP1-205ENST00000470232 GOLPH3LQ9H4A5 285 aa9.43□□□□□ -0.9
SYNGAP1-205ENST00000470232 ZHX3Q9H4I2 956 aa9.43□□□□□ -0.9
SYNGAP1-205ENST00000470232 CD248Q9HCU0 757 aa9.43□□□□□ -0.9
SYNGAP1-205ENST00000470232 USP36Q9P275 1121 aaKnown RBP9.43□□□□□ -0.9
SYNGAP1-205ENST00000470232 EIF2B4Q9UI10 523 aaKnown RBP9.43□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms