RNA–Protein interactions for RNA: ENST00000468958.1

ABCF1-204, Transcript of ATP binding cassette subfamily F member 1, humanhuman

TSL 3

Gene ABCF1, Length 606 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF1-204ENST00000468958 ANKRD52Q8NB46 1076 aa13.19□□□□□ -0.3
ABCF1-204ENST00000468958 NEK11Q8NG66 645 aa13.19□□□□□ -0.3
ABCF1-204ENST00000468958 UBA3Q8TBC4 463 aa13.19□□□□□ -0.3
ABCF1-204ENST00000468958 ERGIC2Q96RQ1 377 aa13.19□□□□□ -0.3
ABCF1-204ENST00000468958 LSM14BQ9BX40 385 aaKnown RBP13.19□□□□□ -0.3
ABCF1-204ENST00000468958 HESX1Q9UBX0 185 aa13.19□□□□□ -0.3
ABCF1-204ENST00000468958 PCDHGA2Q9Y5H1 932 aa13.19□□□□□ -0.3
ABCF1-204ENST00000468958 MYO18AQ92614 2054 aaKnown RBP13.19□□□□□ -0.3
ABCF1-204ENST00000468958 DCHS1Q96JQ0 3298 aa13.19□□□□□ -0.3
ABCF1-204ENST00000468958 CEP192Q8TEP8 1941 aa13.18□□□□□ -0.3
ABCF1-204ENST00000468958 A0A1W2PQC6 194 aa13.18□□□□□ -0.3
ABCF1-204ENST00000468958 E2F8A0AVK6 867 aa13.18□□□□□ -0.3
ABCF1-204ENST00000468958 TRIM24O15164 1050 aa13.18□□□□□ -0.3
ABCF1-204ENST00000468958 CCDC172P0C7W6 258 aa13.18□□□□□ -0.3
ABCF1-204ENST00000468958 CD19P15391 556 aa13.18□□□□□ -0.3
ABCF1-204ENST00000468958 SLC9A1P19634 815 aa13.18□□□□□ -0.3
ABCF1-204ENST00000468958 DRD1P21728 446 aa13.18□□□□□ -0.3
ABCF1-204ENST00000468958 PXNP49023 591 aaPredicted RBP13.18□□□□□ -0.3
ABCF1-204ENST00000468958 ZNF132P52740 706 aa13.18□□□□□ -0.3
ABCF1-204ENST00000468958 GRSF1Q12849 480 aaKnown RBP eCLIP13.18□□□□□ -0.3
ABCF1-204ENST00000468958 MEA1Q16626 185 aa13.18□□□□□ -0.3
ABCF1-204ENST00000468958 LY6G5CQ5SRR4 150 aa13.18□□□□□ -0.3
ABCF1-204ENST00000468958 HEATR6Q6AI08 1181 aaKnown RBP13.18□□□□□ -0.3
ABCF1-204ENST00000468958 GJB7Q6PEY0 223 aa13.18□□□□□ -0.3
ABCF1-204ENST00000468958 ZC3H14Q6PJT7 736 aaKnown RBP13.18□□□□□ -0.3
ABCF1-204ENST00000468958 SYNPOQ8N3V7 929 aa13.18□□□□□ -0.3
ABCF1-204ENST00000468958 RBBP8NLQ8NC74 664 aaPredicted RBP13.18□□□□□ -0.3
ABCF1-204ENST00000468958 RPLP0P6Q8NHW5 317 aa13.18□□□□□ -0.3
ABCF1-204ENST00000468958 HSD3B7Q9H2F3 369 aa13.18□□□□□ -0.3
ABCF1-204ENST00000468958 ZDHHC4Q9NPG8 344 aa13.18□□□□□ -0.3
ABCF1-204ENST00000468958 AJAP1Q9UKB5 411 aaPredicted RBP13.18□□□□□ -0.3
ABCF1-204ENST00000468958 CNTN6Q9UQ52 1028 aa13.18□□□□□ -0.3
ABCF1-204ENST00000468958 FRYLO94915 3013 aa13.18□□□□□ -0.3
ABCF1-204ENST00000468958 TNRC6BQ9UPQ9 1833 aaKnown RBP13.18□□□□□ -0.3
ABCF1-204ENST00000468958 ZFHX2Q9C0A1 2572 aaPredicted RBP13.17□□□□□ -0.3
ABCF1-204ENST00000468958 A0A1B0GTH6 734 aa13.17□□□□□ -0.3
ABCF1-204ENST00000468958 HRO43593 1189 aa13.17□□□□□ -0.3
ABCF1-204ENST00000468958 KLKB1P03952 638 aa13.17□□□□□ -0.3
ABCF1-204ENST00000468958 ATP1A3P13637 1013 aa13.17□□□□□ -0.3
ABCF1-204ENST00000468958 UCHL3P15374 230 aa13.17□□□□□ -0.3
ABCF1-204ENST00000468958 BRD2P25440 801 aaKnown RBP13.17□□□□□ -0.3
ABCF1-204ENST00000468958 ATP5C1P36542 298 aaKnown RBP13.17□□□□□ -0.3
ABCF1-204ENST00000468958 TKTL1P51854 596 aa13.17□□□□□ -0.3
ABCF1-204ENST00000468958 BCAT1P54687 386 aa13.17□□□□□ -0.3
ABCF1-204ENST00000468958 UBASH3AP57075 661 aa13.17□□□□□ -0.3
ABCF1-204ENST00000468958 PTK2Q05397 1052 aa13.17□□□□□ -0.3
ABCF1-204ENST00000468958 RAPGEF1Q13905 1077 aa13.17□□□□□ -0.3
ABCF1-204ENST00000468958 SYCP1Q15431 976 aa13.17□□□□□ -0.3
ABCF1-204ENST00000468958 KLHDC7AQ5VTJ3 777 aa13.17□□□□□ -0.3
ABCF1-204ENST00000468958 HTR3DQ70Z44 454 aa13.17□□□□□ -0.3
ABCF1-204ENST00000468958 DDX42Q86XP3 938 aaKnown RBP eCLIP13.17□□□□□ -0.3
ABCF1-204ENST00000468958 TMEM25Q86YD3 366 aa13.17□□□□□ -0.3
ABCF1-204ENST00000468958 ETFBKMTQ8IXQ9 262 aa13.17□□□□□ -0.3
ABCF1-204ENST00000468958 KIAA1958Q8N8K9 716 aa13.17□□□□□ -0.3
ABCF1-204ENST00000468958 SHC3Q92529 594 aa13.17□□□□□ -0.3
ABCF1-204ENST00000468958 SPAG5Q96R06 1193 aa13.17□□□□□ -0.3
ABCF1-204ENST00000468958 ULBP1Q9BZM6 244 aa13.17□□□□□ -0.3
ABCF1-204ENST00000468958 UBXN6Q9BZV1 441 aa13.17□□□□□ -0.3
ABCF1-204ENST00000468958 EPC1Q9H2F5 836 aa13.17□□□□□ -0.3
ABCF1-204ENST00000468958 SEMA4AQ9H3S1 761 aa13.17□□□□□ -0.3
ABCF1-204ENST00000468958 ACP6Q9NPH0 428 aa13.17□□□□□ -0.3
ABCF1-204ENST00000468958 NAGPAQ9UK23 515 aa13.17□□□□□ -0.3
ABCF1-204ENST00000468958 DNAJC12Q9UKB3 198 aa13.17□□□□□ -0.3
ABCF1-204ENST00000468958 HCN2Q9UL51 889 aa13.17□□□□□ -0.3
ABCF1-204ENST00000468958 SH3BP1Q9Y3L3 701 aa13.17□□□□□ -0.3
ABCF1-204ENST00000468958 CEP83Q9Y592 693 aa13.17□□□□□ -0.3
ABCF1-204ENST00000468958 PLXND1Q9Y4D7 1925 aa13.17□□□□□ -0.3
ABCF1-204ENST00000468958 DNAH14Q0VDD8 3507 aa13.17□□□□□ -0.3
ABCF1-204ENST00000468958 PIEZO1Q92508 2521 aa13.16□□□□□ -0.3
ABCF1-204ENST00000468958 SPAG17Q6Q759 2223 aa13.16□□□□□ -0.3
ABCF1-204ENST00000468958 PIK3R2O00459 728 aa13.16□□□□□ -0.3
ABCF1-204ENST00000468958 XPO1O14980 1071 aaKnown RBP13.16□□□□□ -0.3
ABCF1-204ENST00000468958 STC2O76061 302 aa13.16□□□□□ -0.3
ABCF1-204ENST00000468958 SETSIPP0DME0 302 aa13.16□□□□□ -0.3
ABCF1-204ENST00000468958 ADH5P11766 374 aa13.16□□□□□ -0.3
ABCF1-204ENST00000468958 HNRNPLP14866 589 aaKnown RBP eCLIP13.16□□□□□ -0.3
ABCF1-204ENST00000468958 GNA15P30679 374 aa13.16□□□□□ -0.3
ABCF1-204ENST00000468958 USP8P40818 1118 aa13.16□□□□□ -0.3
ABCF1-204ENST00000468958 SEC13P55735 322 aa13.16□□□□□ -0.3
ABCF1-204ENST00000468958 FANCCQ00597 558 aa13.16□□□□□ -0.3
ABCF1-204ENST00000468958 KDSRQ06136 332 aa13.16□□□□□ -0.3
ABCF1-204ENST00000468958 ADIGQ0VDE8 80 aa13.16□□□□□ -0.3
ABCF1-204ENST00000468958 NR1H3Q13133 447 aa13.16□□□□□ -0.3
ABCF1-204ENST00000468958 LPAL2Q16609 132 aa13.16□□□□□ -0.3
ABCF1-204ENST00000468958 ARHGAP44Q17R89 818 aa13.16□□□□□ -0.3
ABCF1-204ENST00000468958 EMC10Q5UCC4 262 aa13.16□□□□□ -0.3
ABCF1-204ENST00000468958 PM20D1Q6GTS8 502 aa13.16□□□□□ -0.3
ABCF1-204ENST00000468958 DPY19L2P1Q6NXN4 242 aa13.16□□□□□ -0.3
ABCF1-204ENST00000468958 KLHDC10Q6PID8 442 aa13.16□□□□□ -0.3
ABCF1-204ENST00000468958 LCLAT1Q6UWP7 414 aa13.16□□□□□ -0.3
ABCF1-204ENST00000468958 Q6ZNB5 142 aa13.16□□□□□ -0.3
ABCF1-204ENST00000468958 CACNA2D4Q7Z3S7 1137 aa13.16□□□□□ -0.3
ABCF1-204ENST00000468958 ZNF276Q8N554 614 aa13.16□□□□□ -0.3
ABCF1-204ENST00000468958 NAT16Q8N8M0 369 aa13.16□□□□□ -0.3
ABCF1-204ENST00000468958 CLEC4CQ8WTT0 213 aa13.16□□□□□ -0.3
ABCF1-204ENST00000468958 ATRIPQ8WXE1 791 aa13.16□□□□□ -0.3
ABCF1-204ENST00000468958 HHIPQ96QV1 700 aa13.16□□□□□ -0.3
ABCF1-204ENST00000468958 NUP58Q9BVL2 599 aa13.16□□□□□ -0.3
ABCF1-204ENST00000468958 FAM126AQ9BYI3 521 aaPredicted RBP13.16□□□□□ -0.3
ABCF1-204ENST00000468958 STK33Q9BYT3 514 aa13.16□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms