RNA–Protein interactions for RNA: ENST00000468117.1

TMEM53-207, Transcript of transmembrane protein 53, humanhuman

TSL 3

Gene TMEM53, Length 2,017 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM53-207ENST00000468117 EPHB4P54760 987 aa21.44■■□□□ 1.02
TMEM53-207ENST00000468117 DEUP1Q05D60 604 aa21.44■■□□□ 1.02
TMEM53-207ENST00000468117 PPP6R3Q5H9R7 873 aaPredicted RBP21.44■■□□□ 1.02
TMEM53-207ENST00000468117 RFX6Q8HWS3 928 aa21.44■■□□□ 1.02
TMEM53-207ENST00000468117 C7orf61Q8IZ16 206 aa21.44■■□□□ 1.02
TMEM53-207ENST00000468117 GDAP1L1Q96MZ0 367 aa21.44■■□□□ 1.02
TMEM53-207ENST00000468117 RUNDC3BQ96NL0 473 aa21.44■■□□□ 1.02
TMEM53-207ENST00000468117 ERP44Q9BS26 406 aa21.44■■□□□ 1.02
TMEM53-207ENST00000468117 DPH5Q9H2P9 285 aa21.44■■□□□ 1.02
TMEM53-207ENST00000468117 DHX35Q9H5Z1 703 aaKnown RBP21.44■■□□□ 1.02
TMEM53-207ENST00000468117 PCDH18Q9HCL0 1135 aa21.44■■□□□ 1.02
TMEM53-207ENST00000468117 MTRRQ9UBK8 725 aa21.44■■□□□ 1.02
TMEM53-207ENST00000468117 AP4E1Q9UPM8 1137 aa21.44■■□□□ 1.02
TMEM53-207ENST00000468117 DAPK3O43293 454 aa21.43■■□□□ 1.02
TMEM53-207ENST00000468117 SOD2P04179 222 aa21.43■■□□□ 1.02
TMEM53-207ENST00000468117 LAG3P18627 525 aa21.43■■□□□ 1.02
TMEM53-207ENST00000468117 IL4RP24394 825 aa21.43■■□□□ 1.02
TMEM53-207ENST00000468117 PGFP49763 221 aa21.43■■□□□ 1.02
TMEM53-207ENST00000468117 PDK2Q15119 407 aa21.43■■□□□ 1.02
TMEM53-207ENST00000468117 MGAT5BQ3V5L5 792 aa21.43■■□□□ 1.02
TMEM53-207ENST00000468117 MAP9Q49MG5 647 aa21.43■■□□□ 1.02
TMEM53-207ENST00000468117 BBS12Q6ZW61 710 aa21.43■■□□□ 1.02
TMEM53-207ENST00000468117 MAP7D3Q8IWC1 876 aa21.43■■□□□ 1.02
TMEM53-207ENST00000468117 NUP93Q8N1F7 819 aa21.43■■□□□ 1.02
TMEM53-207ENST00000468117 SPPL2BQ8TCT7 592 aa21.43■■□□□ 1.02
TMEM53-207ENST00000468117 PIK3R5Q8WYR1 880 aa21.43■■□□□ 1.02
TMEM53-207ENST00000468117 SEPT5Q99719 369 aaPredicted RBP21.43■■□□□ 1.02
TMEM53-207ENST00000468117 OXCT2Q9BYC2 517 aaPredicted RBP21.43■■□□□ 1.02
TMEM53-207ENST00000468117 RAB17Q9H0T7 212 aa21.43■■□□□ 1.02
TMEM53-207ENST00000468117 CXXC1Q9P0U4 656 aaPredicted RBP21.43■■□□□ 1.02
TMEM53-207ENST00000468117 RASAL2Q9UJF2 1139 aa21.43■■□□□ 1.02
TMEM53-207ENST00000468117 WDR27A2RRH5 827 aa21.43■■□□□ 1.02
TMEM53-207ENST00000468117 ECEL1O95672 775 aa21.43■■□□□ 1.02
TMEM53-207ENST00000468117 OR1D2P34982 312 aa21.43■■□□□ 1.02
TMEM53-207ENST00000468117 YWHAGP61981 247 aaKnown RBP eCLIP21.43■■□□□ 1.02
TMEM53-207ENST00000468117 ROR1Q01973 937 aa21.43■■□□□ 1.02
TMEM53-207ENST00000468117 DUSP4Q13115 394 aa21.43■■□□□ 1.02
TMEM53-207ENST00000468117 SEC14L1Q92503 715 aa21.43■■□□□ 1.02
TMEM53-207ENST00000468117 CCDC114Q96M63 670 aa21.43■■□□□ 1.02
TMEM53-207ENST00000468117 TMPRSS4Q9NRS4 437 aa21.43■■□□□ 1.02
TMEM53-207ENST00000468117 DNPEPQ9ULA0 475 aa21.43■■□□□ 1.02
TMEM53-207ENST00000468117 LIASO43766 372 aa21.42■■□□□ 1.02
TMEM53-207ENST00000468117 L1CAMP32004 1257 aa21.42■■□□□ 1.02
TMEM53-207ENST00000468117 USP46P62068 366 aa21.42■■□□□ 1.02
TMEM53-207ENST00000468117 DPYSL2Q16555 572 aa21.42■■□□□ 1.02
TMEM53-207ENST00000468117 SLC8B1Q6J4K2 584 aa21.42■■□□□ 1.02
TMEM53-207ENST00000468117 AENQ8WTP8 325 aaKnown RBP21.42■■□□□ 1.02
TMEM53-207ENST00000468117 SLCO2A1Q92959 643 aa21.42■■□□□ 1.02
TMEM53-207ENST00000468117 MAK16Q9BXY0 300 aaKnown RBP21.42■■□□□ 1.02
TMEM53-207ENST00000468117 DDIT4Q9NX09 232 aa21.42■■□□□ 1.02
TMEM53-207ENST00000468117 SPG21Q9NZD8 308 aa21.42■■□□□ 1.02
TMEM53-207ENST00000468117 GJB5O95377 273 aa21.41■■□□□ 1.02
TMEM53-207ENST00000468117 SYN1P17600 705 aa21.41■■□□□ 1.02
TMEM53-207ENST00000468117 SMARCB1Q12824 385 aa21.41■■□□□ 1.02
TMEM53-207ENST00000468117 HLTFQ14527 1009 aaKnown RBP eCLIP21.41■■□□□ 1.02
TMEM53-207ENST00000468117 PPP1R7Q15435 360 aa21.41■■□□□ 1.02
TMEM53-207ENST00000468117 DUPD1Q68J44 220 aa21.41■■□□□ 1.02
TMEM53-207ENST00000468117 PYROXD2Q8N2H3 581 aa21.41■■□□□ 1.02
TMEM53-207ENST00000468117 ATL2Q8NHH9 583 aa21.41■■□□□ 1.02
TMEM53-207ENST00000468117 RNF157Q96PX1 679 aa21.41■■□□□ 1.02
TMEM53-207ENST00000468117 FAM204AQ9H8W3 233 aa21.41■■□□□ 1.02
TMEM53-207ENST00000468117 MTMR10Q9NXD2 777 aa21.41■■□□□ 1.02
TMEM53-207ENST00000468117 FZD10Q9ULW2 581 aa21.41■■□□□ 1.02
TMEM53-207ENST00000468117 BACE2Q9Y5Z0 518 aa21.41■■□□□ 1.02
TMEM53-207ENST00000468117 OTUD4Q01804 1114 aaKnown RBP21.41■■□□□ 1.02
TMEM53-207ENST00000468117 KRT17Q04695 432 aa21.41■■□□□ 1.02
TMEM53-207ENST00000468117 CUL1Q13616 776 aa21.41■■□□□ 1.02
TMEM53-207ENST00000468117 BYSLQ13895 437 aaKnown RBP21.41■■□□□ 1.02
TMEM53-207ENST00000468117 ANKRD20A8PQ5CZ79 823 aa21.41■■□□□ 1.02
TMEM53-207ENST00000468117 SCD5Q86SK9 330 aa21.41■■□□□ 1.02
TMEM53-207ENST00000468117 FAM71BQ8TC56 605 aa21.41■■□□□ 1.02
TMEM53-207ENST00000468117 ACTL9Q8TC94 416 aa21.41■■□□□ 1.02
TMEM53-207ENST00000468117 KCTD15Q96SI1 283 aaPredicted RBP21.41■■□□□ 1.02
TMEM53-207ENST00000468117 CLSTN3Q9BQT9 956 aa21.41■■□□□ 1.02
TMEM53-207ENST00000468117 NMUR1Q9HB89 426 aa21.41■■□□□ 1.02
TMEM53-207ENST00000468117 WDR6Q9NNW5 1121 aaKnown RBP21.41■■□□□ 1.02
TMEM53-207ENST00000468117 RRN3Q9NYV6 651 aa21.41■■□□□ 1.02
TMEM53-207ENST00000468117 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP21.41■■□□□ 1.02
TMEM53-207ENST00000468117 HAPLN1P10915 354 aaPredicted RBP21.4■■□□□ 1.02
TMEM53-207ENST00000468117 ECHS1P30084 290 aa21.4■■□□□ 1.02
TMEM53-207ENST00000468117 GLUD2P49448 558 aa21.4■■□□□ 1.02
TMEM53-207ENST00000468117 TMEM240Q5SV17 173 aa21.4■■□□□ 1.02
TMEM53-207ENST00000468117 BTBD8Q5XKL5 378 aa21.4■■□□□ 1.02
TMEM53-207ENST00000468117 DENND5BQ6ZUT9 1274 aa21.4■■□□□ 1.02
TMEM53-207ENST00000468117 TAC4Q86UU9 113 aa21.4■■□□□ 1.02
TMEM53-207ENST00000468117 GRK7Q8WTQ7 553 aa21.4■■□□□ 1.02
TMEM53-207ENST00000468117 C2orf15Q8WU43 125 aaKnown RBP21.4■■□□□ 1.02
TMEM53-207ENST00000468117 PGAP3Q96FM1 320 aaPredicted RBP21.4■■□□□ 1.02
TMEM53-207ENST00000468117 ZNF670Q9BS34 389 aa21.4■■□□□ 1.02
TMEM53-207ENST00000468117 ABCC13Q9NSE7 274 aa21.4■■□□□ 1.02
TMEM53-207ENST00000468117 SCML2Q9UQR0 700 aa21.4■■□□□ 1.02
TMEM53-207ENST00000468117 SNX24Q9Y343 169 aa21.4■■□□□ 1.02
TMEM53-207ENST00000468117 A0A1W2PQH9 124 aa21.39■■□□□ 1.02
TMEM53-207ENST00000468117 PECAM1P16284 738 aaPredicted RBP21.39■■□□□ 1.02
TMEM53-207ENST00000468117 DSG1Q02413 1049 aa21.39■■□□□ 1.02
TMEM53-207ENST00000468117 PCDH19Q8TAB3 1148 aa21.39■■□□□ 1.02
TMEM53-207ENST00000468117 TRAF3IP1Q8TDR0 691 aaPredicted RBP21.39■■□□□ 1.02
TMEM53-207ENST00000468117 DQX1Q8TE96 717 aaKnown RBP21.39■■□□□ 1.02
TMEM53-207ENST00000468117 ZBED2Q9BTP6 218 aa21.39■■□□□ 1.02
TMEM53-207ENST00000468117 TRIM62Q9BVG3 475 aa21.39■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms