RNA–Protein interactions for RNA: ENST00000466222.6

CAPN3-209, Transcript of calpain 3, humanhuman

TSL 2

Gene CAPN3, Length 1,934 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-209ENST00000466222 HERC2P3Q9BVR0 1158 aa19.43■□□□□ 0.7
CAPN3-209ENST00000466222 CEP290O15078 2479 aa19.43■□□□□ 0.7
CAPN3-209ENST00000466222 C2CD4BA6NLJ0 364 aa19.43■□□□□ 0.7
CAPN3-209ENST00000466222 TNFRSF10BO14763 440 aa19.43■□□□□ 0.7
CAPN3-209ENST00000466222 PPFIA2O75334 1257 aa19.43■□□□□ 0.7
CAPN3-209ENST00000466222 PDGFRAP16234 1089 aa19.43■□□□□ 0.7
CAPN3-209ENST00000466222 CA8P35219 290 aa19.43■□□□□ 0.7
CAPN3-209ENST00000466222 CTNNB1P35222 781 aa19.43■□□□□ 0.7
CAPN3-209ENST00000466222 BMPR1AP36894 532 aa19.43■□□□□ 0.7
CAPN3-209ENST00000466222 SSR1P43307 286 aaKnown RBP19.43■□□□□ 0.7
CAPN3-209ENST00000466222 SLC5A3P53794 718 aa19.43■□□□□ 0.7
CAPN3-209ENST00000466222 ATP11AP98196 1134 aa19.43■□□□□ 0.7
CAPN3-209ENST00000466222 ZNF211Q13398 564 aaPredicted RBP19.43■□□□□ 0.7
CAPN3-209ENST00000466222 LLGL1Q15334 1064 aa19.43■□□□□ 0.7
CAPN3-209ENST00000466222 MGAT5BQ3V5L5 792 aa19.43■□□□□ 0.7
CAPN3-209ENST00000466222 ATP13A4Q4VNC1 1196 aa19.43■□□□□ 0.7
CAPN3-209ENST00000466222 BHLHA9Q7RTU4 235 aa19.43■□□□□ 0.7
CAPN3-209ENST00000466222 DDX42Q86XP3 938 aaKnown RBP eCLIP19.43■□□□□ 0.7
CAPN3-209ENST00000466222 UBLCP1Q8WVY7 318 aaPredicted RBP19.43■□□□□ 0.7
CAPN3-209ENST00000466222 FAM149B1Q96BN6 582 aa19.43■□□□□ 0.7
CAPN3-209ENST00000466222 RUNDC3BQ96NL0 473 aa19.43■□□□□ 0.7
CAPN3-209ENST00000466222 SEPT5Q99719 369 aaPredicted RBP19.43■□□□□ 0.7
CAPN3-209ENST00000466222 MTIF3Q9H2K0 278 aaKnown RBP19.43■□□□□ 0.7
CAPN3-209ENST00000466222 IP6K2Q9UHH9 426 aa19.43■□□□□ 0.7
CAPN3-209ENST00000466222 BACE2Q9Y5Z0 518 aa19.43■□□□□ 0.7
CAPN3-209ENST00000466222 CA3P07451 260 aa19.42■□□□□ 0.7
CAPN3-209ENST00000466222 DNAJB1P25685 340 aa19.42■□□□□ 0.7
CAPN3-209ENST00000466222 PPM1AP35813 382 aa19.42■□□□□ 0.7
CAPN3-209ENST00000466222 GJC1P36383 396 aa19.42■□□□□ 0.7
CAPN3-209ENST00000466222 PBX2P40425 430 aa19.42■□□□□ 0.7
CAPN3-209ENST00000466222 PITX1P78337 314 aaPredicted RBP19.42■□□□□ 0.7
CAPN3-209ENST00000466222 DR1Q01658 176 aa19.42■□□□□ 0.7
CAPN3-209ENST00000466222 KRT17Q04695 432 aa19.42■□□□□ 0.7
CAPN3-209ENST00000466222 CDO1Q16878 200 aa19.42■□□□□ 0.7
CAPN3-209ENST00000466222 CCDC14Q49A88 953 aa19.42■□□□□ 0.7
CAPN3-209ENST00000466222 YTHDF3Q7Z739 585 aaKnown RBP19.42■□□□□ 0.7
CAPN3-209ENST00000466222 ACSF2Q96CM8 615 aaPredicted RBP19.42■□□□□ 0.7
CAPN3-209ENST00000466222 FUBP3Q96I24 572 aaKnown RBP eCLIP19.42■□□□□ 0.7
CAPN3-209ENST00000466222 CYLDQ9NQC7 956 aa19.42■□□□□ 0.7
CAPN3-209ENST00000466222 PTPRSQ13332 1948 aa19.42■□□□□ 0.7
CAPN3-209ENST00000466222 SEC24AO95486 1093 aa19.41■□□□□ 0.7
CAPN3-209ENST00000466222 ZBED1O96006 694 aa19.41■□□□□ 0.7
CAPN3-209ENST00000466222 URODP06132 367 aa19.41■□□□□ 0.7
CAPN3-209ENST00000466222 PEX5P50542 639 aa19.41■□□□□ 0.7
CAPN3-209ENST00000466222 ATXN1P54253 815 aaKnown RBP19.41■□□□□ 0.7
CAPN3-209ENST00000466222 DAOAP59103 153 aa19.41■□□□□ 0.7
CAPN3-209ENST00000466222 ERVFC1P60507 584 aa19.41■□□□□ 0.7
CAPN3-209ENST00000466222 USP46P62068 366 aa19.41■□□□□ 0.7
CAPN3-209ENST00000466222 TAP1Q03518 808 aa19.41■□□□□ 0.7
CAPN3-209ENST00000466222 DUPD1Q68J44 220 aa19.41■□□□□ 0.7
CAPN3-209ENST00000466222 TTC19Q6DKK2 380 aaPredicted RBP19.41■□□□□ 0.7
CAPN3-209ENST00000466222 SLC26A9Q7LBE3 791 aa19.41■□□□□ 0.7
CAPN3-209ENST00000466222 FMO2Q99518 471 aa19.41■□□□□ 0.7
CAPN3-209ENST00000466222 ERP44Q9BS26 406 aa19.41■□□□□ 0.7
CAPN3-209ENST00000466222 TEX28O15482 410 aa19.41■□□□□ 0.7
CAPN3-209ENST00000466222 KIAA0754O94854 1291 aa19.41■□□□□ 0.7
CAPN3-209ENST00000466222 FYNP06241 537 aa19.41■□□□□ 0.7
CAPN3-209ENST00000466222 SPATA31D3P0C874 917 aa19.41■□□□□ 0.7
CAPN3-209ENST00000466222 CHRNA3P32297 505 aa19.41■□□□□ 0.7
CAPN3-209ENST00000466222 GUCY1A3Q02108 690 aa19.41■□□□□ 0.7
CAPN3-209ENST00000466222 SYPL2Q5VXT5 272 aa19.41■□□□□ 0.7
CAPN3-209ENST00000466222 SPATA31D4Q6ZUB0 917 aa19.41■□□□□ 0.7
CAPN3-209ENST00000466222 CROCCP2Q86T23 111 aa19.41■□□□□ 0.7
CAPN3-209ENST00000466222 ZDHHC17Q8IUH5 632 aa19.41■□□□□ 0.7
CAPN3-209ENST00000466222 TXLNGYQ9BZA5 131 aa19.41■□□□□ 0.7
CAPN3-209ENST00000466222 ZBP1Q9H171 429 aa19.41■□□□□ 0.7
CAPN3-209ENST00000466222 KLHL11Q9NVR0 708 aa19.41■□□□□ 0.7
CAPN3-209ENST00000466222 LILRB3O75022 631 aa19.4■□□□□ 0.7
CAPN3-209ENST00000466222 PHF2O75151 1096 aa19.4■□□□□ 0.7
CAPN3-209ENST00000466222 LRCH4O75427 683 aa19.4■□□□□ 0.7
CAPN3-209ENST00000466222 FAM107AO95990 144 aa19.4■□□□□ 0.7
CAPN3-209ENST00000466222 GPD1P21695 349 aa19.4■□□□□ 0.7
CAPN3-209ENST00000466222 ZNF143P52747 638 aaPredicted RBP19.4■□□□□ 0.7
CAPN3-209ENST00000466222 SNX16P57768 344 aa19.4■□□□□ 0.7
CAPN3-209ENST00000466222 DHX9Q08211 1270 aaKnown RBP19.4■□□□□ 0.7
CAPN3-209ENST00000466222 DEFB106AQ8N104 65 aa19.4■□□□□ 0.7
CAPN3-209ENST00000466222 GADD45GIP1Q8TAE8 222 aaPredicted RBP19.4■□□□□ 0.7
CAPN3-209ENST00000466222 GIPC2Q8TF65 315 aa19.4■□□□□ 0.7
CAPN3-209ENST00000466222 FAM129AQ9BZQ8 928 aa19.4■□□□□ 0.7
CAPN3-209ENST00000466222 CERS4Q9HA82 394 aa19.4■□□□□ 0.7
CAPN3-209ENST00000466222 MRPL17Q9NRX2 175 aaKnown RBP19.4■□□□□ 0.7
CAPN3-209ENST00000466222 NAALADL1Q9UQQ1 740 aa19.4■□□□□ 0.7
CAPN3-209ENST00000466222 YBX2Q9Y2T7 364 aaKnown RBP19.4■□□□□ 0.7
CAPN3-209ENST00000466222 USP3Q9Y6I4 520 aa19.4■□□□□ 0.7
CAPN3-209ENST00000466222 VWA8A3KMH1 1905 aa19.4■□□□□ 0.7
CAPN3-209ENST00000466222 IL1R2P27930 398 aa19.39■□□□□ 0.7
CAPN3-209ENST00000466222 YWHAZP63104 245 aaKnown RBP19.39■□□□□ 0.7
CAPN3-209ENST00000466222 PIGHQ14442 188 aaPredicted RBP19.39■□□□□ 0.7
CAPN3-209ENST00000466222 DCAF6Q58WW2 860 aa19.39■□□□□ 0.7
CAPN3-209ENST00000466222 KCNT1Q5JUK3 1230 aa19.39■□□□□ 0.7
CAPN3-209ENST00000466222 VSTM1Q6UX27 236 aa19.39■□□□□ 0.7
CAPN3-209ENST00000466222 TMC7Q7Z402 723 aa19.39■□□□□ 0.7
CAPN3-209ENST00000466222 HOOK3Q86VS8 718 aa19.39■□□□□ 0.7
CAPN3-209ENST00000466222 NLRP14Q86W24 1093 aa19.39■□□□□ 0.7
CAPN3-209ENST00000466222 ZNF473Q8WTR7 871 aaKnown RBP19.39■□□□□ 0.7
CAPN3-209ENST00000466222 EDEM1Q92611 657 aa19.39■□□□□ 0.7
CAPN3-209ENST00000466222 UBE2OQ9C0C9 1292 aaKnown RBP19.39■□□□□ 0.7
CAPN3-209ENST00000466222 CNGB3Q9NQW8 809 aa19.39■□□□□ 0.7
CAPN3-209ENST00000466222 PCSK1NQ9UHG2 260 aa19.39■□□□□ 0.7
CAPN3-209ENST00000466222 SLC12A6Q9UHW9 1150 aa19.39■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms