RNA–Protein interactions for RNA: ENST00000466141.1

RPUSD3-212, Transcript of RNA pseudouridylate synthase domain containing 3, humanhuman

TSL 2

Gene RPUSD3, Length 996 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD3-212ENST00000466141 ME1P48163 572 aa7.68□□□□□ -1.18
RPUSD3-212ENST00000466141 POLD2P49005 469 aa7.68□□□□□ -1.18
RPUSD3-212ENST00000466141 CDK17Q00537 523 aa7.68□□□□□ -1.18
RPUSD3-212ENST00000466141 PLIN5Q00G26 463 aa7.68□□□□□ -1.18
RPUSD3-212ENST00000466141 NCBP1Q09161 790 aaKnown RBP7.68□□□□□ -1.18
RPUSD3-212ENST00000466141 KIF5AQ12840 1032 aa7.68□□□□□ -1.18
RPUSD3-212ENST00000466141 WLSQ5T9L3 541 aa7.68□□□□□ -1.18
RPUSD3-212ENST00000466141 NT5DC1Q5TFE4 455 aa7.68□□□□□ -1.18
RPUSD3-212ENST00000466141 RRAGBQ5VZM2 374 aa7.68□□□□□ -1.18
RPUSD3-212ENST00000466141 EEF1DP3Q658K8 133 aa7.68□□□□□ -1.18
RPUSD3-212ENST00000466141 FCRLBQ6BAA4 426 aa7.68□□□□□ -1.18
RPUSD3-212ENST00000466141 LAIR1Q6GTX8 287 aa7.68□□□□□ -1.18
RPUSD3-212ENST00000466141 PRSS55Q6UWB4 352 aaPredicted RBP7.68□□□□□ -1.18
RPUSD3-212ENST00000466141 ANKS3Q6ZW76 656 aa7.68□□□□□ -1.18
RPUSD3-212ENST00000466141 CDR2LQ86X02 465 aaPredicted RBP7.68□□□□□ -1.18
RPUSD3-212ENST00000466141 DDX42Q86XP3 938 aaKnown RBP eCLIP7.68□□□□□ -1.18
RPUSD3-212ENST00000466141 GRAMD2AQ8IUY3 354 aa7.68□□□□□ -1.18
RPUSD3-212ENST00000466141 SLC44A2Q8IWA5 706 aaPredicted RBP7.68□□□□□ -1.18
RPUSD3-212ENST00000466141 TMCO5AQ8N6Q1 288 aa7.68□□□□□ -1.18
RPUSD3-212ENST00000466141 MAB21L3Q8N8X9 362 aa7.68□□□□□ -1.18
RPUSD3-212ENST00000466141 ZBTB8BQ8NAP8 495 aaPredicted RBP7.68□□□□□ -1.18
RPUSD3-212ENST00000466141 ZFP42Q96MM3 310 aa7.68□□□□□ -1.18
RPUSD3-212ENST00000466141 GAD1Q99259 594 aa7.68□□□□□ -1.18
RPUSD3-212ENST00000466141 NTPCRQ9BSD7 190 aaKnown RBP7.68□□□□□ -1.18
RPUSD3-212ENST00000466141 HERPUD2Q9BSE4 406 aa7.68□□□□□ -1.18
RPUSD3-212ENST00000466141 FAM126AQ9BYI3 521 aaPredicted RBP7.68□□□□□ -1.18
RPUSD3-212ENST00000466141 PLA2G2FQ9BZM2 168 aa7.68□□□□□ -1.18
RPUSD3-212ENST00000466141 SCAND2PQ9GZW5 306 aaPredicted RBP7.68□□□□□ -1.18
RPUSD3-212ENST00000466141 PLEKHA4Q9H4M7 779 aa7.68□□□□□ -1.18
RPUSD3-212ENST00000466141 TMEM134Q9H6X4 195 aa7.68□□□□□ -1.18
RPUSD3-212ENST00000466141 CHST7Q9NS84 486 aa7.68□□□□□ -1.18
RPUSD3-212ENST00000466141 SPTLC3Q9NUV7 552 aa7.68□□□□□ -1.18
RPUSD3-212ENST00000466141 KBTBD4Q9NVX7 518 aa7.68□□□□□ -1.18
RPUSD3-212ENST00000466141 HCFC1R1Q9NWW0 138 aa7.68□□□□□ -1.18
RPUSD3-212ENST00000466141 MIOSQ9NXC5 875 aa7.68□□□□□ -1.18
RPUSD3-212ENST00000466141 LARSQ9P2J5 1176 aaKnown RBP7.68□□□□□ -1.18
RPUSD3-212ENST00000466141 SEPT3Q9UH03 358 aa7.68□□□□□ -1.18
RPUSD3-212ENST00000466141 RAB23Q9ULC3 237 aa7.68□□□□□ -1.18
RPUSD3-212ENST00000466141 PNMA8BQ9ULN7 279 aaPredicted RBP7.68□□□□□ -1.18
RPUSD3-212ENST00000466141 NDRG2Q9UN36 371 aaKnown RBP7.68□□□□□ -1.18
RPUSD3-212ENST00000466141 POLIQ9UNA4 740 aa7.68□□□□□ -1.18
RPUSD3-212ENST00000466141 USP20Q9Y2K6 914 aa7.68□□□□□ -1.18
RPUSD3-212ENST00000466141 ZNF711Q9Y462 761 aa7.68□□□□□ -1.18
RPUSD3-212ENST00000466141 HES2Q9Y543 173 aa7.68□□□□□ -1.18
RPUSD3-212ENST00000466141 IPPQ9Y573 584 aa7.68□□□□□ -1.18
RPUSD3-212ENST00000466141 FRYQ5TBA9 3013 aa7.68□□□□□ -1.18
RPUSD3-212ENST00000466141 FAM237AA0A1B0GTK4 181 aa7.67□□□□□ -1.18
RPUSD3-212ENST00000466141 CCDC169A6NNP5 214 aa7.67□□□□□ -1.18
RPUSD3-212ENST00000466141 SFI1A8K8P3 1242 aa7.67□□□□□ -1.18
RPUSD3-212ENST00000466141 C1QTNF9BB2RNN3 333 aa7.67□□□□□ -1.18
RPUSD3-212ENST00000466141 NDC80O14777 642 aa7.67□□□□□ -1.18
RPUSD3-212ENST00000466141 ADAM12O43184 909 aa7.67□□□□□ -1.18
RPUSD3-212ENST00000466141 FAM13AO94988 1023 aa7.67□□□□□ -1.18
RPUSD3-212ENST00000466141 NPTXRO95502 500 aa7.67□□□□□ -1.18
RPUSD3-212ENST00000466141 CAVIN2O95810 425 aa7.67□□□□□ -1.18
RPUSD3-212ENST00000466141 PIGRP01833 764 aa7.67□□□□□ -1.18
RPUSD3-212ENST00000466141 RETP07949 1114 aa7.67□□□□□ -1.18
RPUSD3-212ENST00000466141 C1QTNF9P0C862 333 aa7.67□□□□□ -1.18
RPUSD3-212ENST00000466141 EPB42P16452 691 aa7.67□□□□□ -1.18
RPUSD3-212ENST00000466141 VARSP26640 1264 aaKnown RBP7.67□□□□□ -1.18
RPUSD3-212ENST00000466141 CSTF2P33240 577 aaKnown RBP eCLIP7.67□□□□□ -1.18
RPUSD3-212ENST00000466141 CTNNA1P35221 906 aaKnown RBP7.67□□□□□ -1.18
RPUSD3-212ENST00000466141 ACTN2P35609 894 aa7.67□□□□□ -1.18
RPUSD3-212ENST00000466141 ETV3P41162 512 aa7.67□□□□□ -1.18
RPUSD3-212ENST00000466141 RPS9P46781 194 aaKnown RBP7.67□□□□□ -1.18
RPUSD3-212ENST00000466141 ST13P50502 369 aaKnown RBP7.67□□□□□ -1.18
RPUSD3-212ENST00000466141 SCNN1GP51170 649 aa7.67□□□□□ -1.18
RPUSD3-212ENST00000466141 DSC1Q08554 894 aa7.67□□□□□ -1.18
RPUSD3-212ENST00000466141 STIM1Q13586 685 aa7.67□□□□□ -1.18
RPUSD3-212ENST00000466141 CUL3Q13618 768 aa7.67□□□□□ -1.18
RPUSD3-212ENST00000466141 SEMA3AQ14563 771 aa7.67□□□□□ -1.18
RPUSD3-212ENST00000466141 CCDC6Q16204 474 aa7.67□□□□□ -1.18
RPUSD3-212ENST00000466141 DCAF4L1Q3SXM0 396 aa7.67□□□□□ -1.18
RPUSD3-212ENST00000466141 KRT71Q3SY84 523 aa7.67□□□□□ -1.18
RPUSD3-212ENST00000466141 RTP2Q5QGT7 225 aa7.67□□□□□ -1.18
RPUSD3-212ENST00000466141 ATF7IP2Q5U623 682 aa7.67□□□□□ -1.18
RPUSD3-212ENST00000466141 HIBCHQ6NVY1 386 aaPredicted RBP7.67□□□□□ -1.18
RPUSD3-212ENST00000466141 FUT10Q6P4F1 479 aa7.67□□□□□ -1.18
RPUSD3-212ENST00000466141 CNNM4Q6P4Q7 775 aa7.67□□□□□ -1.18
RPUSD3-212ENST00000466141 POTEHQ6S545 545 aa7.67□□□□□ -1.18
RPUSD3-212ENST00000466141 MTSS1LQ765P7 747 aa7.67□□□□□ -1.18
RPUSD3-212ENST00000466141 NLRP9Q7RTR0 991 aa7.67□□□□□ -1.18
RPUSD3-212ENST00000466141 ARHGAP30Q7Z6I6 1101 aaPredicted RBP7.67□□□□□ -1.18
RPUSD3-212ENST00000466141 SFR1Q86XK3 245 aa7.67□□□□□ -1.18
RPUSD3-212ENST00000466141 NPAS3Q8IXF0 933 aa7.67□□□□□ -1.18
RPUSD3-212ENST00000466141 CCDC116Q8IYX3 515 aa7.67□□□□□ -1.18
RPUSD3-212ENST00000466141 ZNF687Q8N1G0 1237 aa7.67□□□□□ -1.18
RPUSD3-212ENST00000466141 CNNM3Q8NE01 707 aa7.67□□□□□ -1.18
RPUSD3-212ENST00000466141 OR8K1Q8NGG5 319 aa7.67□□□□□ -1.18
RPUSD3-212ENST00000466141 DHX58Q96C10 678 aa7.67□□□□□ -1.18
RPUSD3-212ENST00000466141 HVCN1Q96D96 273 aa7.67□□□□□ -1.18
RPUSD3-212ENST00000466141 TRMT2BQ96GJ1 504 aaKnown RBP7.67□□□□□ -1.18
RPUSD3-212ENST00000466141 ACO2Q99798 780 aaKnown RBP7.67□□□□□ -1.18
RPUSD3-212ENST00000466141 TTPALQ9BTX7 342 aa7.67□□□□□ -1.18
RPUSD3-212ENST00000466141 APOL6Q9BWW8 343 aa7.67□□□□□ -1.18
RPUSD3-212ENST00000466141 MRPL4Q9BYD3 311 aaKnown RBP7.67□□□□□ -1.18
RPUSD3-212ENST00000466141 CDT1Q9H211 546 aa7.67□□□□□ -1.18
RPUSD3-212ENST00000466141 CUEDC2Q9H467 287 aa7.67□□□□□ -1.18
RPUSD3-212ENST00000466141 ST6GALNAC4Q9H4F1 302 aa7.67□□□□□ -1.18
RPUSD3-212ENST00000466141 MAGEF1Q9HAY2 307 aa7.67□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 92.5 ms