RNA–Protein interactions for RNA: ENST00000464539.1

TNRC6A-205, Transcript of trinucleotide repeat containing 6A, humanhuman

TSL 1 (best)

Gene TNRC6A, Length 1,853 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNRC6A-205ENST00000464539 APOBEC2Q9Y235 224 aaKnown RBP11.94□□□□□ -0.5
TNRC6A-205ENST00000464539 FADS3Q9Y5Q0 445 aa11.94□□□□□ -0.5
TNRC6A-205ENST00000464539 AP4B1Q9Y6B7 739 aa11.94□□□□□ -0.5
TNRC6A-205ENST00000464539 HTTP42858 3142 aa11.94□□□□□ -0.5
TNRC6A-205ENST00000464539 TRIM43BA6NCK2 446 aa11.93□□□□□ -0.5
TNRC6A-205ENST00000464539 CAPN8A6NHC0 703 aa11.93□□□□□ -0.5
TNRC6A-205ENST00000464539 H3BSA7 217 aa11.93□□□□□ -0.5
TNRC6A-205ENST00000464539 ZNF701M0R085 212 aaPredicted RBP11.93□□□□□ -0.5
TNRC6A-205ENST00000464539 SGK1O00141 431 aa11.93□□□□□ -0.5
TNRC6A-205ENST00000464539 ADCY3O60266 1144 aa11.93□□□□□ -0.5
TNRC6A-205ENST00000464539 DKC1O60832 514 aaKnown RBP eCLIP11.93□□□□□ -0.5
TNRC6A-205ENST00000464539 ETS1P14921 441 aa11.93□□□□□ -0.5
TNRC6A-205ENST00000464539 ATP2B4P23634 1241 aa11.93□□□□□ -0.5
TNRC6A-205ENST00000464539 PCSK6P29122 969 aa11.93□□□□□ -0.5
TNRC6A-205ENST00000464539 HOXD12P35452 270 aa11.93□□□□□ -0.5
TNRC6A-205ENST00000464539 ZNF76P36508 570 aa11.93□□□□□ -0.5
TNRC6A-205ENST00000464539 PPARGP37231 505 aaPredicted RBP11.93□□□□□ -0.5
TNRC6A-205ENST00000464539 ALDH3B2P48448 385 aa11.93□□□□□ -0.5
TNRC6A-205ENST00000464539 RELAQ04206 551 aa11.93□□□□□ -0.5
TNRC6A-205ENST00000464539 CHI3L2Q15782 390 aa11.93□□□□□ -0.5
TNRC6A-205ENST00000464539 STXBP5Q5T5C0 1151 aa11.93□□□□□ -0.5
TNRC6A-205ENST00000464539 WDR78Q5VTH9 848 aa11.93□□□□□ -0.5
TNRC6A-205ENST00000464539 PLA2G4FQ68DD2 849 aa11.93□□□□□ -0.5
TNRC6A-205ENST00000464539 SPOCD1Q6ZMY3 1216 aa11.93□□□□□ -0.5
TNRC6A-205ENST00000464539 C15orf52Q6ZUT6 534 aaKnown RBP11.93□□□□□ -0.5
TNRC6A-205ENST00000464539 TICAM1Q8IUC6 712 aa11.93□□□□□ -0.5
TNRC6A-205ENST00000464539 FBXL13Q8NEE6 735 aa11.93□□□□□ -0.5
TNRC6A-205ENST00000464539 TMC2Q8TDI7 906 aa11.93□□□□□ -0.5
TNRC6A-205ENST00000464539 CPT1BQ92523 772 aa11.93□□□□□ -0.5
TNRC6A-205ENST00000464539 HSPBAP1Q96EW2 488 aa11.93□□□□□ -0.5
TNRC6A-205ENST00000464539 LRGUKQ96M69 825 aa11.93□□□□□ -0.5
TNRC6A-205ENST00000464539 SMYD3Q9H7B4 428 aa11.93□□□□□ -0.5
TNRC6A-205ENST00000464539 SPATA7Q9P0W8 599 aa11.93□□□□□ -0.5
TNRC6A-205ENST00000464539 TRDMT1O14717 391 aaKnown RBP11.93□□□□□ -0.5
TNRC6A-205ENST00000464539 SERPINB7O75635 380 aa11.93□□□□□ -0.5
TNRC6A-205ENST00000464539 AKR1B1P15121 316 aa11.93□□□□□ -0.5
TNRC6A-205ENST00000464539 SLC16A2P36021 539 aa11.93□□□□□ -0.5
TNRC6A-205ENST00000464539 RHBDL3P58872 404 aa11.93□□□□□ -0.5
TNRC6A-205ENST00000464539 TUBA4AP68366 448 aa11.93□□□□□ -0.5
TNRC6A-205ENST00000464539 MAMLD1Q13495 774 aa11.93□□□□□ -0.5
TNRC6A-205ENST00000464539 TFDP3Q5H9I0 405 aa11.93□□□□□ -0.5
TNRC6A-205ENST00000464539 DACT2Q5SW24 774 aa11.93□□□□□ -0.5
TNRC6A-205ENST00000464539 PHF13Q86YI8 300 aaPredicted RBP11.93□□□□□ -0.5
TNRC6A-205ENST00000464539 FEZF2Q8TBJ5 459 aa11.93□□□□□ -0.5
TNRC6A-205ENST00000464539 DCAF4Q8WV16 495 aa11.93□□□□□ -0.5
TNRC6A-205ENST00000464539 SEMA4DQ92854 862 aa11.93□□□□□ -0.5
TNRC6A-205ENST00000464539 SGF29Q96ES7 293 aa11.93□□□□□ -0.5
TNRC6A-205ENST00000464539 AGAP3Q96P47 875 aa11.93□□□□□ -0.5
TNRC6A-205ENST00000464539 SERPINI1Q99574 410 aa11.93□□□□□ -0.5
TNRC6A-205ENST00000464539 PRPF18Q99633 342 aaKnown RBP11.93□□□□□ -0.5
TNRC6A-205ENST00000464539 CCT7Q99832 543 aa11.93□□□□□ -0.5
TNRC6A-205ENST00000464539 SENP7Q9BQF6 1050 aa11.93□□□□□ -0.5
TNRC6A-205ENST00000464539 AMNQ9BXJ7 453 aa11.93□□□□□ -0.5
TNRC6A-205ENST00000464539 FRMD8Q9BZ67 464 aaPredicted RBP11.93□□□□□ -0.5
TNRC6A-205ENST00000464539 PCIF1Q9H4Z3 704 aa11.93□□□□□ -0.5
TNRC6A-205ENST00000464539 VPS45Q9NRW7 570 aa11.93□□□□□ -0.5
TNRC6A-205ENST00000464539 INIPQ9NRY2 104 aa11.93□□□□□ -0.5
TNRC6A-205ENST00000464539 PRPF19Q9UMS4 504 aaKnown RBP11.93□□□□□ -0.5
TNRC6A-205ENST00000464539 PTCH2Q9Y6C5 1203 aa11.93□□□□□ -0.5
TNRC6A-205ENST00000464539 hCG_1818297A0A087WSY0 165 aa11.92□□□□□ -0.5
TNRC6A-205ENST00000464539 A0A0B4J269 797 aa11.92□□□□□ -0.5
TNRC6A-205ENST00000464539 HTR3EA5X5Y0 456 aa11.92□□□□□ -0.5
TNRC6A-205ENST00000464539 ARHGEF35A5YM69 484 aa11.92□□□□□ -0.5
TNRC6A-205ENST00000464539 K7ENM7 598 aa11.92□□□□□ -0.5
TNRC6A-205ENST00000464539 TLR3O15455 904 aaKnown RBP11.92□□□□□ -0.5
TNRC6A-205ENST00000464539 MAGEB3O15480 346 aa11.92□□□□□ -0.5
TNRC6A-205ENST00000464539 CLASP2O75122 1294 aaKnown RBP11.92□□□□□ -0.5
TNRC6A-205ENST00000464539 PSMD10O75832 226 aa11.92□□□□□ -0.5
TNRC6A-205ENST00000464539 KRT1P04264 644 aa11.92□□□□□ -0.5
TNRC6A-205ENST00000464539 BPGMP07738 259 aa11.92□□□□□ -0.5
TNRC6A-205ENST00000464539 ATP6V1B1P15313 513 aa11.92□□□□□ -0.5
TNRC6A-205ENST00000464539 L1CAMP32004 1257 aa11.92□□□□□ -0.5
TNRC6A-205ENST00000464539 EPHB1P54762 984 aa11.92□□□□□ -0.5
TNRC6A-205ENST00000464539 C1QBPQ07021 282 aaKnown RBP11.92□□□□□ -0.5
TNRC6A-205ENST00000464539 TUBB3Q13509 450 aa11.92□□□□□ -0.5
TNRC6A-205ENST00000464539 UBAP2LQ14157 1087 aaKnown RBP11.92□□□□□ -0.5
TNRC6A-205ENST00000464539 MSS51Q4VC12 460 aa11.92□□□□□ -0.5
TNRC6A-205ENST00000464539 MFSD7Q6UXD7 560 aa11.92□□□□□ -0.5
TNRC6A-205ENST00000464539 TMEM110Q86TL2 294 aa11.92□□□□□ -0.5
TNRC6A-205ENST00000464539 TXNRD3Q86VQ6 643 aa11.92□□□□□ -0.5
TNRC6A-205ENST00000464539 DPF3Q92784 378 aa11.92□□□□□ -0.5
TNRC6A-205ENST00000464539 SLC2A11Q9BYW1 496 aa11.92□□□□□ -0.5
TNRC6A-205ENST00000464539 NUF2Q9BZD4 464 aa11.92□□□□□ -0.5
TNRC6A-205ENST00000464539 GINM1Q9NU53 330 aa11.92□□□□□ -0.5
TNRC6A-205ENST00000464539 TBC1D23Q9NUY8 699 aa11.92□□□□□ -0.5
TNRC6A-205ENST00000464539 PARVAQ9NVD7 372 aa11.92□□□□□ -0.5
TNRC6A-205ENST00000464539 DNAJC28Q9NX36 388 aa11.92□□□□□ -0.5
TNRC6A-205ENST00000464539 TMOD2Q9NZR1 351 aa11.92□□□□□ -0.5
TNRC6A-205ENST00000464539 ARHGAP26Q9UNA1 814 aa11.92□□□□□ -0.5
TNRC6A-205ENST00000464539 TESPA1A2RU30 521 aaPredicted RBP11.91□□□□□ -0.5
TNRC6A-205ENST00000464539 IFNB1P01574 187 aa11.91□□□□□ -0.5
TNRC6A-205ENST00000464539 PROCP04070 461 aa11.91□□□□□ -0.5
TNRC6A-205ENST00000464539 KRT10P13645 584 aa11.91□□□□□ -0.5
TNRC6A-205ENST00000464539 KRT5P13647 590 aa11.91□□□□□ -0.5
TNRC6A-205ENST00000464539 CRHR1P34998 444 aa11.91□□□□□ -0.5
TNRC6A-205ENST00000464539 PHKA2P46019 1235 aa11.91□□□□□ -0.5
TNRC6A-205ENST00000464539 ERFP50548 548 aa11.91□□□□□ -0.5
TNRC6A-205ENST00000464539 ADGRE1Q14246 886 aa11.91□□□□□ -0.5
TNRC6A-205ENST00000464539 BBS9Q3SYG4 887 aa11.91□□□□□ -0.5
TNRC6A-205ENST00000464539 RALGPS1Q5JS13 557 aa11.91□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms