RNA–Protein interactions for RNA: ENST00000461574.1

BRCA1-206, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 2

Gene BRCA1, Length 726 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-206ENST00000461574 RPL9P32969 192 aaKnown RBP5.46□□□□□ -1.54
BRCA1-206ENST00000461574 HSPA4P34932 840 aa5.46□□□□□ -1.54
BRCA1-206ENST00000461574 KRT2P35908 639 aa5.46□□□□□ -1.54
BRCA1-206ENST00000461574 MATR3P43243 847 aaKnown RBP eCLIP5.46□□□□□ -1.54
BRCA1-206ENST00000461574 SIM1P81133 766 aaPredicted RBP5.46□□□□□ -1.54
BRCA1-206ENST00000461574 CYP4F8P98187 520 aa5.46□□□□□ -1.54
BRCA1-206ENST00000461574 LMAN2Q12907 356 aa5.46□□□□□ -1.54
BRCA1-206ENST00000461574 DUSP4Q13115 394 aa5.46□□□□□ -1.54
BRCA1-206ENST00000461574 RUNX3Q13761 415 aa5.46□□□□□ -1.54
BRCA1-206ENST00000461574 DMC1Q14565 340 aa5.46□□□□□ -1.54
BRCA1-206ENST00000461574 NPY5RQ15761 445 aa5.46□□□□□ -1.54
BRCA1-206ENST00000461574 MGAT5BQ3V5L5 792 aa5.46□□□□□ -1.54
BRCA1-206ENST00000461574 FBXO43Q4G163 708 aa5.46□□□□□ -1.54
BRCA1-206ENST00000461574 TMEM196Q5HYL7 178 aa5.46□□□□□ -1.54
BRCA1-206ENST00000461574 CDKAL1Q5VV42 579 aa5.46□□□□□ -1.54
BRCA1-206ENST00000461574 LMBRD2Q68DH5 695 aaPredicted RBP5.46□□□□□ -1.54
BRCA1-206ENST00000461574 ANO7Q6IWH7 933 aa5.46□□□□□ -1.54
BRCA1-206ENST00000461574 FSTL4Q6MZW2 842 aa5.46□□□□□ -1.54
BRCA1-206ENST00000461574 ARMCX5Q6P1M9 558 aa5.46□□□□□ -1.54
BRCA1-206ENST00000461574 C19orf48Q6RUI8 117 aa5.46□□□□□ -1.54
BRCA1-206ENST00000461574 DSTYKQ6XUX3 929 aa5.46□□□□□ -1.54
BRCA1-206ENST00000461574 TMC8Q8IU68 726 aa5.46□□□□□ -1.54
BRCA1-206ENST00000461574 HDDC3Q8N4P3 179 aa5.46□□□□□ -1.54
BRCA1-206ENST00000461574 CPA6Q8N4T0 437 aa5.46□□□□□ -1.54
BRCA1-206ENST00000461574 TSTD1Q8NFU3 115 aa5.46□□□□□ -1.54
BRCA1-206ENST00000461574 ERMNQ8TAM6 284 aa5.46□□□□□ -1.54
BRCA1-206ENST00000461574 PIGKQ92643 395 aa5.46□□□□□ -1.54
BRCA1-206ENST00000461574 KIFAP3Q92845 792 aa5.46□□□□□ -1.54
BRCA1-206ENST00000461574 PSMG2Q969U7 264 aa5.46□□□□□ -1.54
BRCA1-206ENST00000461574 C18orf25Q96B23 403 aaPredicted RBP5.46□□□□□ -1.54
BRCA1-206ENST00000461574 DRC1Q96MC2 740 aa5.46□□□□□ -1.54
BRCA1-206ENST00000461574 ACAP3Q96P50 834 aa5.46□□□□□ -1.54
BRCA1-206ENST00000461574 SEPT5Q99719 369 aaPredicted RBP5.46□□□□□ -1.54
BRCA1-206ENST00000461574 HSD17B14Q9BPX1 270 aa5.46□□□□□ -1.54
BRCA1-206ENST00000461574 NUSAP1Q9BXS6 441 aaKnown RBP5.46□□□□□ -1.54
BRCA1-206ENST00000461574 MRPL4Q9BYD3 311 aaKnown RBP5.46□□□□□ -1.54
BRCA1-206ENST00000461574 AGXT2Q9BYV1 514 aa5.46□□□□□ -1.54
BRCA1-206ENST00000461574 TPSD1Q9BZJ3 242 aa5.46□□□□□ -1.54
BRCA1-206ENST00000461574 CDT1Q9H211 546 aa5.46□□□□□ -1.54
BRCA1-206ENST00000461574 EBF3Q9H4W6 596 aa5.46□□□□□ -1.54
BRCA1-206ENST00000461574 TUFT1Q9NNX1 390 aa5.46□□□□□ -1.54
BRCA1-206ENST00000461574 GKN1Q9NS71 199 aa5.46□□□□□ -1.54
BRCA1-206ENST00000461574 ANKFY1Q9P2R3 1169 aa5.46□□□□□ -1.54
BRCA1-206ENST00000461574 KLK13Q9UKR3 277 aa5.46□□□□□ -1.54
BRCA1-206ENST00000461574 TNFSF13BQ9Y275 285 aa5.46□□□□□ -1.54
BRCA1-206ENST00000461574 ASB3Q9Y575 518 aa5.46□□□□□ -1.54
BRCA1-206ENST00000461574 TIMM13Q9Y5L4 95 aaPredicted RBP5.46□□□□□ -1.54
BRCA1-206ENST00000461574 CEP192Q8TEP8 1941 aa5.46□□□□□ -1.54
BRCA1-206ENST00000461574 HELZ2Q9BYK8 2649 aaKnown RBP5.45□□□□□ -1.54
BRCA1-206ENST00000461574 LAMA5O15230 3695 aa5.45□□□□□ -1.54
BRCA1-206ENST00000461574 TENM4Q6N022 2769 aa5.45□□□□□ -1.54
BRCA1-206ENST00000461574 HELZP42694 1942 aaKnown RBP5.45□□□□□ -1.54
BRCA1-206ENST00000461574 SPAARA0A1B0GVQ0 90 aa5.45□□□□□ -1.54
BRCA1-206ENST00000461574 OR6C75A6NL08 312 aa5.45□□□□□ -1.54
BRCA1-206ENST00000461574 PATE3B3GLJ2 98 aa5.45□□□□□ -1.54
BRCA1-206ENST00000461574 H0Y626 953 aa5.45□□□□□ -1.54
BRCA1-206ENST00000461574 TAF4O00268 1085 aa5.45□□□□□ -1.54
BRCA1-206ENST00000461574 TRDMT1O14717 391 aaKnown RBP5.45□□□□□ -1.54
BRCA1-206ENST00000461574 FBXO24O75426 580 aa5.45□□□□□ -1.54
BRCA1-206ENST00000461574 SOAT2O75908 522 aa5.45□□□□□ -1.54
BRCA1-206ENST00000461574 LRIG2O94898 1065 aa5.45□□□□□ -1.54
BRCA1-206ENST00000461574 TRIM16O95361 564 aa5.45□□□□□ -1.54
BRCA1-206ENST00000461574 CFIP05156 583 aa5.45□□□□□ -1.54
BRCA1-206ENST00000461574 EDN1P05305 212 aa5.45□□□□□ -1.54
BRCA1-206ENST00000461574 ZSCAN22P10073 491 aaPredicted RBP5.45□□□□□ -1.54
BRCA1-206ENST00000461574 MCF2P10911 925 aa5.45□□□□□ -1.54
BRCA1-206ENST00000461574 KCNE1P15382 129 aa5.45□□□□□ -1.54
BRCA1-206ENST00000461574 CYP11B2P19099 503 aa5.45□□□□□ -1.54
BRCA1-206ENST00000461574 U2AF2P26368 475 aaKnown RBP eCLIP5.45□□□□□ -1.54
BRCA1-206ENST00000461574 IRX6P78412 446 aaPredicted RBP5.45□□□□□ -1.54
BRCA1-206ENST00000461574 STRN3Q13033 797 aa5.45□□□□□ -1.54
BRCA1-206ENST00000461574 DMP1Q13316 513 aaPredicted RBP5.45□□□□□ -1.54
BRCA1-206ENST00000461574 TRIM29Q14134 588 aa5.45□□□□□ -1.54
BRCA1-206ENST00000461574 MRPL58Q14197 206 aaKnown RBP5.45□□□□□ -1.54
BRCA1-206ENST00000461574 TRIM61Q5EBN2 209 aa5.45□□□□□ -1.54
BRCA1-206ENST00000461574 NT5DC1Q5TFE4 455 aa5.45□□□□□ -1.54
BRCA1-206ENST00000461574 HAUS3Q68CZ6 603 aa5.45□□□□□ -1.54
BRCA1-206ENST00000461574 PMS2CLQ68D20 193 aa5.45□□□□□ -1.54
BRCA1-206ENST00000461574 TRIM68Q6AZZ1 485 aa5.45□□□□□ -1.54
BRCA1-206ENST00000461574 OVOS1Q6IE37 1185 aa5.45□□□□□ -1.54
BRCA1-206ENST00000461574 CD300LGQ6UXG3 332 aa5.45□□□□□ -1.54
BRCA1-206ENST00000461574 GAREM2Q75VX8 874 aa5.45□□□□□ -1.54
BRCA1-206ENST00000461574 RUFY3Q7L099 469 aa5.45□□□□□ -1.54
BRCA1-206ENST00000461574 SYT13Q7L8C5 426 aa5.45□□□□□ -1.54
BRCA1-206ENST00000461574 DNAJB7Q7Z6W7 309 aaPredicted RBP5.45□□□□□ -1.54
BRCA1-206ENST00000461574 CATSPER3Q86XQ3 398 aa5.45□□□□□ -1.54
BRCA1-206ENST00000461574 FBXL16Q8N461 479 aa5.45□□□□□ -1.54
BRCA1-206ENST00000461574 CCDC26Q8TAB7 109 aa5.45□□□□□ -1.54
BRCA1-206ENST00000461574 WASF1Q92558 559 aa5.45□□□□□ -1.54
BRCA1-206ENST00000461574 ZMAT2Q96NC0 199 aaKnown RBP5.45□□□□□ -1.54
BRCA1-206ENST00000461574 LRRC3BQ96PB8 259 aa5.45□□□□□ -1.54
BRCA1-206ENST00000461574 DIRC2Q96SL1 478 aa5.45□□□□□ -1.54
BRCA1-206ENST00000461574 P2RY13Q9BPV8 354 aa5.45□□□□□ -1.54
BRCA1-206ENST00000461574 GTPBP2Q9BX10 602 aaKnown RBP5.45□□□□□ -1.54
BRCA1-206ENST00000461574 TASP1Q9H6P5 420 aa5.45□□□□□ -1.54
BRCA1-206ENST00000461574 KIF9Q9HAQ2 790 aa5.45□□□□□ -1.54
BRCA1-206ENST00000461574 GJB4Q9NTQ9 266 aa5.45□□□□□ -1.54
BRCA1-206ENST00000461574 POLR3BQ9NW08 1133 aaPredicted RBP5.45□□□□□ -1.54
BRCA1-206ENST00000461574 BCCIPQ9P287 314 aaKnown RBP eCLIP5.45□□□□□ -1.54
BRCA1-206ENST00000461574 TUBGCP4Q9UGJ1 667 aa5.45□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms