RNA–Protein interactions for RNA: ENST00000461221.5

BRCA1-205, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 5,693 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-205ENST00000461221 VTI1BQ9UEU0 232 aa9.25□□□□□ -0.93
BRCA1-205ENST00000461221 SLC24A2Q9UI40 661 aa9.25□□□□□ -0.93
BRCA1-205ENST00000461221 ACOT9Q9Y305 439 aa9.25□□□□□ -0.93
BRCA1-205ENST00000461221 TTLL13PA6NNM8 815 aa9.25□□□□□ -0.93
BRCA1-205ENST00000461221 CD3EAPO15446 510 aaKnown RBP9.25□□□□□ -0.93
BRCA1-205ENST00000461221 ATMINO43313 823 aaPredicted RBP9.25□□□□□ -0.93
BRCA1-205ENST00000461221 NR3C2P08235 984 aa9.25□□□□□ -0.93
BRCA1-205ENST00000461221 TSPAN19P0C672 248 aa9.25□□□□□ -0.93
BRCA1-205ENST00000461221 ZCCHC18P0CG32 403 aa9.25□□□□□ -0.93
BRCA1-205ENST00000461221 MBL2P11226 248 aaPredicted RBP9.25□□□□□ -0.93
BRCA1-205ENST00000461221 AQP5P55064 265 aa9.25□□□□□ -0.93
BRCA1-205ENST00000461221 EPS8Q12929 822 aa9.25□□□□□ -0.93
BRCA1-205ENST00000461221 CUL2Q13617 745 aa9.25□□□□□ -0.93
BRCA1-205ENST00000461221 IZUMO2Q6UXV1 221 aa9.25□□□□□ -0.93
BRCA1-205ENST00000461221 KIAA0408Q6ZU52 694 aa9.25□□□□□ -0.93
BRCA1-205ENST00000461221 IZUMO1Q8IYV9 350 aa9.25□□□□□ -0.93
BRCA1-205ENST00000461221 RORBQ92753 470 aa9.25□□□□□ -0.93
BRCA1-205ENST00000461221 NARS2Q96I59 477 aaKnown RBP9.25□□□□□ -0.93
BRCA1-205ENST00000461221 NSMCE2Q96MF7 247 aa9.25□□□□□ -0.93
BRCA1-205ENST00000461221 TRIT1Q9H3H1 467 aaKnown RBP9.25□□□□□ -0.93
BRCA1-205ENST00000461221 ELP3Q9H9T3 547 aa9.25□□□□□ -0.93
BRCA1-205ENST00000461221 DPP3Q9NY33 737 aa9.25□□□□□ -0.93
BRCA1-205ENST00000461221 ABI2Q9NYB9 513 aaPredicted RBP9.25□□□□□ -0.93
BRCA1-205ENST00000461221 NLRP1Q9C000 1473 aa9.25□□□□□ -0.93
BRCA1-205ENST00000461221 EFCAB10A6NFE3 127 aa9.25□□□□□ -0.93
BRCA1-205ENST00000461221 ATP5BP06576 529 aaKnown RBP9.25□□□□□ -0.93
BRCA1-205ENST00000461221 CCDC130P13994 396 aa9.25□□□□□ -0.93
BRCA1-205ENST00000461221 PBLDP30039 288 aaPredicted RBP9.25□□□□□ -0.93
BRCA1-205ENST00000461221 SKIV2L2P42285 1042 aaKnown RBP9.25□□□□□ -0.93
BRCA1-205ENST00000461221 KCNJ1P48048 391 aa9.25□□□□□ -0.93
BRCA1-205ENST00000461221 EIF2B2P49770 351 aaKnown RBP9.25□□□□□ -0.93
BRCA1-205ENST00000461221 KPNA1P52294 538 aaPredicted RBP9.25□□□□□ -0.93
BRCA1-205ENST00000461221 MTA1Q13330 715 aa9.25□□□□□ -0.93
BRCA1-205ENST00000461221 R3HDM1Q15032 1099 aaKnown RBP9.25□□□□□ -0.93
BRCA1-205ENST00000461221 PDIA6Q15084 440 aa9.25□□□□□ -0.93
BRCA1-205ENST00000461221 ZSWIM7Q19AV6 140 aa9.25□□□□□ -0.93
BRCA1-205ENST00000461221 TCEAL5Q5H9L2 206 aa9.25□□□□□ -0.93
BRCA1-205ENST00000461221 MZT2BQ6NZ67 158 aa9.25□□□□□ -0.93
BRCA1-205ENST00000461221 ERO1BQ86YB8 467 aa9.25□□□□□ -0.93
BRCA1-205ENST00000461221 CLYBLQ8N0X4 340 aa9.25□□□□□ -0.93
BRCA1-205ENST00000461221 TPCN2Q8NHX9 752 aa9.25□□□□□ -0.93
BRCA1-205ENST00000461221 TRPC4APQ8TEL6 797 aa9.25□□□□□ -0.93
BRCA1-205ENST00000461221 USP7Q93009 1102 aa9.25□□□□□ -0.93
BRCA1-205ENST00000461221 GPRASP2Q96D09 838 aa9.25□□□□□ -0.93
BRCA1-205ENST00000461221 VCPKMTQ9H867 229 aa9.25□□□□□ -0.93
BRCA1-205ENST00000461221 ATAD3AQ9NVI7 634 aa9.25□□□□□ -0.93
BRCA1-205ENST00000461221 BCLAF3A2AJT9 711 aaKnown RBP9.24□□□□□ -0.93
BRCA1-205ENST00000461221 MYMKA6NI61 221 aa9.24□□□□□ -0.93
BRCA1-205ENST00000461221 HOXA2O43364 376 aa9.24□□□□□ -0.93
BRCA1-205ENST00000461221 KLHL41O60662 606 aa9.24□□□□□ -0.93
BRCA1-205ENST00000461221 VDRP11473 427 aa9.24□□□□□ -0.93
BRCA1-205ENST00000461221 CPA3P15088 417 aa9.24□□□□□ -0.93
BRCA1-205ENST00000461221 NME5P56597 212 aa9.24□□□□□ -0.93
BRCA1-205ENST00000461221 RASA2Q15283 850 aa9.24□□□□□ -0.93
BRCA1-205ENST00000461221 TIMM50Q3ZCQ8 353 aa9.24□□□□□ -0.93
BRCA1-205ENST00000461221 SLC26A11Q86WA9 606 aa9.24□□□□□ -0.93
BRCA1-205ENST00000461221 KYQ8NBH2 561 aa9.24□□□□□ -0.93
BRCA1-205ENST00000461221 CHST13Q8NET6 341 aa9.24□□□□□ -0.93
BRCA1-205ENST00000461221 NMD3Q96D46 503 aaKnown RBP9.24□□□□□ -0.93
BRCA1-205ENST00000461221 PDCD10Q9BUL8 212 aa9.24□□□□□ -0.93
BRCA1-205ENST00000461221 RACGAP1Q9H0H5 632 aa9.24□□□□□ -0.93
BRCA1-205ENST00000461221 EPB41L4BQ9H329 900 aa9.24□□□□□ -0.93
BRCA1-205ENST00000461221 ACTR8Q9H981 624 aa9.24□□□□□ -0.93
BRCA1-205ENST00000461221 GPAMQ9HCL2 828 aa9.24□□□□□ -0.93
BRCA1-205ENST00000461221 PCDHGA4Q9Y5G9 962 aa9.24□□□□□ -0.93
BRCA1-205ENST00000461221 PEG3Q9GZU2 1588 aa9.24□□□□□ -0.93
BRCA1-205ENST00000461221 MAGEB16A2A368 324 aa9.24□□□□□ -0.93
BRCA1-205ENST00000461221 ERN1O75460 977 aaKnown RBP9.24□□□□□ -0.93
BRCA1-205ENST00000461221 OR6A2O95222 327 aa9.24□□□□□ -0.93
BRCA1-205ENST00000461221 VAV1P15498 845 aa9.24□□□□□ -0.93
BRCA1-205ENST00000461221 ALDH7A1P49419 539 aaKnown RBP9.24□□□□□ -0.93
BRCA1-205ENST00000461221 RENBPP51606 427 aa9.24□□□□□ -0.93
BRCA1-205ENST00000461221 HLFQ16534 295 aa9.24□□□□□ -0.93
BRCA1-205ENST00000461221 TSGA10IPQ3SY00 556 aa9.24□□□□□ -0.93
BRCA1-205ENST00000461221 WASHC2DQ5SRD0 308 aa9.24□□□□□ -0.93
BRCA1-205ENST00000461221 MXRA8Q9BRK3 442 aa9.24□□□□□ -0.93
BRCA1-205ENST00000461221 DSEQ9UL01 958 aa9.24□□□□□ -0.93
BRCA1-205ENST00000461221 LRRC14BA6NHZ5 514 aa9.24□□□□□ -0.93
BRCA1-205ENST00000461221 MFN2O95140 757 aa9.24□□□□□ -0.93
BRCA1-205ENST00000461221 SCTRP47872 440 aa9.24□□□□□ -0.93
BRCA1-205ENST00000461221 RPL10AP62906 217 aaKnown RBP9.24□□□□□ -0.93
BRCA1-205ENST00000461221 FMR1Q06787 632 aaKnown RBP eCLIP9.24□□□□□ -0.93
BRCA1-205ENST00000461221 NR6A1Q15406 480 aa9.24□□□□□ -0.93
BRCA1-205ENST00000461221 TFDP3Q5H9I0 405 aa9.24□□□□□ -0.93
BRCA1-205ENST00000461221 NEK5Q6P3R8 708 aa9.24□□□□□ -0.93
BRCA1-205ENST00000461221 STRA8Q7Z7C7 330 aa9.24□□□□□ -0.93
BRCA1-205ENST00000461221 SYTL1Q8IYJ3 562 aa9.24□□□□□ -0.93
BRCA1-205ENST00000461221 SEPT12Q8IYM1 358 aa9.24□□□□□ -0.93
BRCA1-205ENST00000461221 SPPL2AQ8TCT8 520 aa9.24□□□□□ -0.93
BRCA1-205ENST00000461221 ACTRT2Q8TDY3 377 aa9.24□□□□□ -0.93
BRCA1-205ENST00000461221 UBASH3BQ8TF42 649 aa9.24□□□□□ -0.93
BRCA1-205ENST00000461221 CDK5RAP1Q96SZ6 601 aaKnown RBP9.24□□□□□ -0.93
BRCA1-205ENST00000461221 BCL2L14Q9BZR8 327 aa9.24□□□□□ -0.93
BRCA1-205ENST00000461221 ZNF518BQ9C0D4 1074 aa9.24□□□□□ -0.93
BRCA1-205ENST00000461221 CD248Q9HCU0 757 aa9.24□□□□□ -0.93
BRCA1-205ENST00000461221 ING3Q9NXR8 418 aa9.24□□□□□ -0.93
BRCA1-205ENST00000461221 MTMR4Q9NYA4 1195 aa9.24□□□□□ -0.93
BRCA1-205ENST00000461221 COQ6Q9Y2Z9 468 aa9.24□□□□□ -0.93
BRCA1-205ENST00000461221 AP1G2O75843 785 aa9.24□□□□□ -0.93
BRCA1-205ENST00000461221 CYP7B1O75881 506 aa9.24□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms