RNA–Protein interactions for RNA: ENST00000461127.5

TOP3A-202, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 3

Gene TOP3A, Length 823 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-202ENST00000461127 CACNA2D1P54289 1103 aa18.22■□□□□ 0.51
TOP3A-202ENST00000461127 GOLGA8FQ08AF8 430 aa18.22■□□□□ 0.51
TOP3A-202ENST00000461127 GOLGA8DPQ0D2H9 430 aa18.22■□□□□ 0.51
TOP3A-202ENST00000461127 ALCAMQ13740 583 aa18.22■□□□□ 0.51
TOP3A-202ENST00000461127 SMAD1Q15797 465 aaKnown RBP18.22■□□□□ 0.51
TOP3A-202ENST00000461127 CCDC157Q569K6 752 aa18.22■□□□□ 0.51
TOP3A-202ENST00000461127 TPGS1Q6ZTW0 290 aa18.22■□□□□ 0.51
TOP3A-202ENST00000461127 HTR3DQ70Z44 454 aa18.22■□□□□ 0.51
TOP3A-202ENST00000461127 GPD1LQ8N335 351 aa18.22■□□□□ 0.51
TOP3A-202ENST00000461127 MRPL45Q9BRJ2 306 aaKnown RBP18.22■□□□□ 0.51
TOP3A-202ENST00000461127 CBWD1Q9BRT8 395 aa18.22■□□□□ 0.51
TOP3A-202ENST00000461127 PCIF1Q9H4Z3 704 aa18.22■□□□□ 0.51
TOP3A-202ENST00000461127 TBC1D7Q9P0N9 293 aa18.22■□□□□ 0.51
TOP3A-202ENST00000461127 EIF2B4Q9UI10 523 aaKnown RBP18.22■□□□□ 0.51
TOP3A-202ENST00000461127 LSM7Q9UK45 103 aaKnown RBP18.22■□□□□ 0.51
TOP3A-202ENST00000461127 WDR3Q9UNX4 943 aaKnown RBP eCLIP18.22■□□□□ 0.51
TOP3A-202ENST00000461127 WASH3PC4AMC7 463 aa18.21■□□□□ 0.51
TOP3A-202ENST00000461127 CAPN9O14815 690 aa18.21■□□□□ 0.51
TOP3A-202ENST00000461127 NPC1O15118 1278 aa18.21■□□□□ 0.51
TOP3A-202ENST00000461127 ACADMP11310 421 aa18.21■□□□□ 0.51
TOP3A-202ENST00000461127 GRK6P43250 576 aa18.21■□□□□ 0.51
TOP3A-202ENST00000461127 TPMTP51580 245 aa18.21■□□□□ 0.51
TOP3A-202ENST00000461127 AFF3P51826 1226 aaKnown RBP18.21■□□□□ 0.51
TOP3A-202ENST00000461127 FUT11Q495W5 492 aa18.21■□□□□ 0.51
TOP3A-202ENST00000461127 FOXD4L5Q5VV16 416 aaPredicted RBP18.21■□□□□ 0.51
TOP3A-202ENST00000461127 OR5B17Q8NGF7 314 aa18.21■□□□□ 0.51
TOP3A-202ENST00000461127 FOXD4L4Q8WXT5 416 aaPredicted RBP18.21■□□□□ 0.51
TOP3A-202ENST00000461127 NXPE2Q96DL1 559 aa18.21■□□□□ 0.51
TOP3A-202ENST00000461127 NUP58Q9BVL2 599 aa18.21■□□□□ 0.51
TOP3A-202ENST00000461127 TMEM30AQ9NV96 361 aa18.21■□□□□ 0.51
TOP3A-202ENST00000461127 MARK1Q9P0L2 795 aa18.21■□□□□ 0.51
TOP3A-202ENST00000461127 STON1Q9Y6Q2 735 aa18.21■□□□□ 0.51
TOP3A-202ENST00000461127 A0A1B0GVT2 93 aa18.2■□□□□ 0.5
TOP3A-202ENST00000461127 ZNF233A6NK53 670 aa18.2■□□□□ 0.5
TOP3A-202ENST00000461127 A8MXQ7 604 aa18.2■□□□□ 0.5
TOP3A-202ENST00000461127 CLDN5O00501 218 aa18.2■□□□□ 0.5
TOP3A-202ENST00000461127 RRP8O43159 456 aaKnown RBP18.2■□□□□ 0.5
TOP3A-202ENST00000461127 SYNCRIPO60506 623 aaKnown RBP18.2■□□□□ 0.5
TOP3A-202ENST00000461127 BMP15O95972 392 aa18.2■□□□□ 0.5
TOP3A-202ENST00000461127 ZSCAN22P10073 491 aaPredicted RBP18.2■□□□□ 0.5
TOP3A-202ENST00000461127 TNNC1P63316 161 aa18.2■□□□□ 0.5
TOP3A-202ENST00000461127 BNC1Q01954 994 aa18.2■□□□□ 0.5
TOP3A-202ENST00000461127 PKP1Q13835 747 aa18.2■□□□□ 0.5
TOP3A-202ENST00000461127 E2F5Q15329 346 aa18.2■□□□□ 0.5
TOP3A-202ENST00000461127 TEAD4Q15561 434 aa18.2■□□□□ 0.5
TOP3A-202ENST00000461127 INAVAQ3KP66 663 aa18.2■□□□□ 0.5
TOP3A-202ENST00000461127 B3GALNT2Q8NCR0 500 aa18.2■□□□□ 0.5
TOP3A-202ENST00000461127 SCAMP5Q8TAC9 235 aa18.2■□□□□ 0.5
TOP3A-202ENST00000461127 PRCCQ92733 491 aaPredicted RBP18.2■□□□□ 0.5
TOP3A-202ENST00000461127 WBP2Q969T9 261 aa18.2■□□□□ 0.5
TOP3A-202ENST00000461127 SIPA1Q96FS4 1042 aa18.2■□□□□ 0.5
TOP3A-202ENST00000461127 B3GNT5Q9BYG0 378 aa18.2■□□□□ 0.5
TOP3A-202ENST00000461127 MKRN2Q9H000 416 aaKnown RBP18.2■□□□□ 0.5
TOP3A-202ENST00000461127 COMMD8Q9NX08 183 aa18.2■□□□□ 0.5
TOP3A-202ENST00000461127 MTMR6Q9Y217 621 aa18.2■□□□□ 0.5
TOP3A-202ENST00000461127 BTBD3Q9Y2F9 522 aa18.2■□□□□ 0.5
TOP3A-202ENST00000461127 ZNF462Q96JM2 2506 aa18.2■□□□□ 0.5
TOP3A-202ENST00000461127 NAV2Q8IVL1 2488 aa18.2■□□□□ 0.5
TOP3A-202ENST00000461127 TLR5O60602 858 aa18.19■□□□□ 0.5
TOP3A-202ENST00000461127 ITPKBP27987 946 aa18.19■□□□□ 0.5
TOP3A-202ENST00000461127 SLC5A3P53794 718 aa18.19■□□□□ 0.5
TOP3A-202ENST00000461127 C6orf118Q5T5N4 469 aa18.19■□□□□ 0.5
TOP3A-202ENST00000461127 TMPRSS12Q86WS5 348 aa18.19■□□□□ 0.5
TOP3A-202ENST00000461127 TMPRSS6Q8IU80 811 aa18.19■□□□□ 0.5
TOP3A-202ENST00000461127 WDR49Q8IV35 697 aa18.19■□□□□ 0.5
TOP3A-202ENST00000461127 UCMAQ8WVF2 138 aa18.19■□□□□ 0.5
TOP3A-202ENST00000461127 SNX19Q92543 992 aa18.19■□□□□ 0.5
TOP3A-202ENST00000461127 MED10Q9BTT4 135 aa18.19■□□□□ 0.5
TOP3A-202ENST00000461127 PCED1AQ9H1Q7 454 aa18.19■□□□□ 0.5
TOP3A-202ENST00000461127 DPEP3Q9H4B8 488 aa18.19■□□□□ 0.5
TOP3A-202ENST00000461127 PRORYQ9H606 182 aa18.19■□□□□ 0.5
TOP3A-202ENST00000461127 DMAP1Q9NPF5 467 aaPredicted RBP18.19■□□□□ 0.5
TOP3A-202ENST00000461127 OLFML3Q9NRN5 406 aa18.19■□□□□ 0.5
TOP3A-202ENST00000461127 GMIPQ9P107 970 aa18.19■□□□□ 0.5
TOP3A-202ENST00000461127 STK17AQ9UEE5 414 aa18.19■□□□□ 0.5
TOP3A-202ENST00000461127 RAI2Q9Y5P3 530 aa18.19■□□□□ 0.5
TOP3A-202ENST00000461127 PTPRJQ12913 1337 aa18.19■□□□□ 0.5
TOP3A-202ENST00000461127 CAPN8A6NHC0 703 aa18.18■□□□□ 0.5
TOP3A-202ENST00000461127 KCNJ18B7U540 433 aa18.18■□□□□ 0.5
TOP3A-202ENST00000461127 ZDHHC11BP0C7U3 371 aa18.18■□□□□ 0.5
TOP3A-202ENST00000461127 HNF1BP35680 557 aa18.18■□□□□ 0.5
TOP3A-202ENST00000461127 CSNK1EP49674 416 aaKnown RBP18.18■□□□□ 0.5
TOP3A-202ENST00000461127 PTPRNQ16849 979 aa18.18■□□□□ 0.5
TOP3A-202ENST00000461127 WDR72Q3MJ13 1102 aa18.18■□□□□ 0.5
TOP3A-202ENST00000461127 DHRS13Q6UX07 377 aa18.18■□□□□ 0.5
TOP3A-202ENST00000461127 TRAPPC11Q7Z392 1133 aa18.18■□□□□ 0.5
TOP3A-202ENST00000461127 FCRL3Q96P31 734 aaPredicted RBP18.18■□□□□ 0.5
TOP3A-202ENST00000461127 KCNK16Q96T55 309 aa18.18■□□□□ 0.5
TOP3A-202ENST00000461127 IL37Q9NZH6 218 aa18.18■□□□□ 0.5
TOP3A-202ENST00000461127 CCDC39Q9UFE4 941 aa18.18■□□□□ 0.5
TOP3A-202ENST00000461127 NME7Q9Y5B8 376 aa18.18■□□□□ 0.5
TOP3A-202ENST00000461127 PTPRQQ9UMZ3 2332 aa18.18■□□□□ 0.5
TOP3A-202ENST00000461127 PLK4O00444 970 aa18.17■□□□□ 0.5
TOP3A-202ENST00000461127 F13A1P00488 732 aa18.17■□□□□ 0.5
TOP3A-202ENST00000461127 IGLV3-19P01714 112 aa18.17■□□□□ 0.5
TOP3A-202ENST00000461127 CISD3P0C7P0 127 aa18.17■□□□□ 0.5
TOP3A-202ENST00000461127 EIF2S3P41091 472 aaKnown RBP18.17■□□□□ 0.5
TOP3A-202ENST00000461127 CCT8P50990 548 aa18.17■□□□□ 0.5
TOP3A-202ENST00000461127 CASP5P51878 434 aa18.17■□□□□ 0.5
TOP3A-202ENST00000461127 CDH8P55286 799 aa18.17■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms