RNA–Protein interactions for RNA: ENST00000460928.1

ATPAF1-203, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

TSL 2

Gene ATPAF1, Length 869 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-203ENST00000460928 FERMT2Q96AC1 680 aa5.31□□□□□ -1.56
ATPAF1-203ENST00000460928 RRP36Q96EU6 259 aaKnown RBP5.31□□□□□ -1.56
ATPAF1-203ENST00000460928 ZNF274Q96GC6 653 aaPredicted RBP5.31□□□□□ -1.56
ATPAF1-203ENST00000460928 ERO1AQ96HE7 468 aa5.31□□□□□ -1.56
ATPAF1-203ENST00000460928 TMX3Q96JJ7 454 aa5.31□□□□□ -1.56
ATPAF1-203ENST00000460928 MAML3Q96JK9 1138 aa5.31□□□□□ -1.56
ATPAF1-203ENST00000460928 TSPAN18Q96SJ8 248 aa5.31□□□□□ -1.56
ATPAF1-203ENST00000460928 ARPC5LQ9BPX5 153 aa5.31□□□□□ -1.56
ATPAF1-203ENST00000460928 SPZ1Q9BXG8 430 aa5.31□□□□□ -1.56
ATPAF1-203ENST00000460928 PANK2Q9BZ23 570 aa5.31□□□□□ -1.56
ATPAF1-203ENST00000460928 UPF2Q9HAU5 1272 aaKnown RBP5.31□□□□□ -1.56
ATPAF1-203ENST00000460928 PDGFCQ9NRA1 345 aa5.31□□□□□ -1.56
ATPAF1-203ENST00000460928 TUBD1Q9UJT1 453 aa5.31□□□□□ -1.56
ATPAF1-203ENST00000460928 SYNPO2Q9UMS6 1093 aa5.31□□□□□ -1.56
ATPAF1-203ENST00000460928 LIMCH1Q9UPQ0 1083 aa5.31□□□□□ -1.56
ATPAF1-203ENST00000460928 DNM3Q9UQ16 869 aa5.31□□□□□ -1.56
ATPAF1-203ENST00000460928 PTPN22Q9Y2R2 807 aa5.31□□□□□ -1.56
ATPAF1-203ENST00000460928 SLC30A1Q9Y6M5 507 aa5.31□□□□□ -1.56
ATPAF1-203ENST00000460928 CACNA1GO43497 2377 aa5.31□□□□□ -1.56
ATPAF1-203ENST00000460928 DOCK5Q9H7D0 1870 aa5.3□□□□□ -1.56
ATPAF1-203ENST00000460928 ATP2A1O14983 1001 aa5.3□□□□□ -1.56
ATPAF1-203ENST00000460928 ADCY6O43306 1168 aa5.3□□□□□ -1.56
ATPAF1-203ENST00000460928 SNAI1O95863 264 aaPredicted RBP5.3□□□□□ -1.56
ATPAF1-203ENST00000460928 CALM1P0DP23 149 aa5.3□□□□□ -1.56
ATPAF1-203ENST00000460928 CALM2P0DP24 149 aa5.3□□□□□ -1.56
ATPAF1-203ENST00000460928 CALM3P0DP25 149 aa5.3□□□□□ -1.56
ATPAF1-203ENST00000460928 MYBP10242 640 aa5.3□□□□□ -1.56
ATPAF1-203ENST00000460928 FCER1AP12319 257 aa5.3□□□□□ -1.56
ATPAF1-203ENST00000460928 IFNAR1P17181 557 aa5.3□□□□□ -1.56
ATPAF1-203ENST00000460928 MAPK4P31152 587 aa5.3□□□□□ -1.56
ATPAF1-203ENST00000460928 NAPAP54920 295 aa5.3□□□□□ -1.56
ATPAF1-203ENST00000460928 RPS6P62753 249 aaKnown RBP5.3□□□□□ -1.56
ATPAF1-203ENST00000460928 FOXE3Q13461 319 aa5.3□□□□□ -1.56
ATPAF1-203ENST00000460928 GRB14Q14449 540 aa5.3□□□□□ -1.56
ATPAF1-203ENST00000460928 KCTD2Q14681 263 aa5.3□□□□□ -1.56
ATPAF1-203ENST00000460928 KIF22Q14807 665 aa5.3□□□□□ -1.56
ATPAF1-203ENST00000460928 NPY5RQ15761 445 aa5.3□□□□□ -1.56
ATPAF1-203ENST00000460928 MUM1Q2TAK8 710 aa5.3□□□□□ -1.56
ATPAF1-203ENST00000460928 EARS2Q5JPH6 523 aaKnown RBP5.3□□□□□ -1.56
ATPAF1-203ENST00000460928 JAKMIP3Q5VZ66 844 aa5.3□□□□□ -1.56
ATPAF1-203ENST00000460928 RNF207Q6ZRF8 634 aa5.3□□□□□ -1.56
ATPAF1-203ENST00000460928 DPP9Q86TI2 863 aa5.3□□□□□ -1.56
ATPAF1-203ENST00000460928 FUKQ8N0W3 1084 aa5.3□□□□□ -1.56
ATPAF1-203ENST00000460928 FBXL16Q8N461 479 aa5.3□□□□□ -1.56
ATPAF1-203ENST00000460928 MSL3Q8N5Y2 521 aaKnown RBP5.3□□□□□ -1.56
ATPAF1-203ENST00000460928 MB21D1Q8N884 522 aa5.3□□□□□ -1.56
ATPAF1-203ENST00000460928 FAM133AQ8N9E0 248 aa5.3□□□□□ -1.56
ATPAF1-203ENST00000460928 SHCBP1Q8NEM2 672 aa5.3□□□□□ -1.56
ATPAF1-203ENST00000460928 RAET1EQ8TD07 263 aa5.3□□□□□ -1.56
ATPAF1-203ENST00000460928 DIS3LQ8TF46 1054 aaKnown RBP5.3□□□□□ -1.56
ATPAF1-203ENST00000460928 GJA10Q969M2 543 aa5.3□□□□□ -1.56
ATPAF1-203ENST00000460928 ADOQ96SZ5 270 aa5.3□□□□□ -1.56
ATPAF1-203ENST00000460928 MAP3K14Q99558 947 aa5.3□□□□□ -1.56
ATPAF1-203ENST00000460928 ACO2Q99798 780 aaKnown RBP5.3□□□□□ -1.56
ATPAF1-203ENST00000460928 AMNQ9BXJ7 453 aa5.3□□□□□ -1.56
ATPAF1-203ENST00000460928 ALDH8A1Q9H2A2 487 aaPredicted RBP5.3□□□□□ -1.56
ATPAF1-203ENST00000460928 KCTD10Q9H3F6 313 aa5.3□□□□□ -1.56
ATPAF1-203ENST00000460928 MROH8Q9H579 483 aa5.3□□□□□ -1.56
ATPAF1-203ENST00000460928 ACAD9Q9H845 621 aa5.3□□□□□ -1.56
ATPAF1-203ENST00000460928 SLC39A2Q9NP94 309 aa5.3□□□□□ -1.56
ATPAF1-203ENST00000460928 CYP39A1Q9NYL5 469 aa5.3□□□□□ -1.56
ATPAF1-203ENST00000460928 ORC3Q9UBD5 711 aaPredicted RBP5.3□□□□□ -1.56
ATPAF1-203ENST00000460928 TMPRSS11EQ9UL52 423 aa5.3□□□□□ -1.56
ATPAF1-203ENST00000460928 OAZ3Q9UMX2 235 aa5.3□□□□□ -1.56
ATPAF1-203ENST00000460928 HS3ST3A1Q9Y663 406 aa5.3□□□□□ -1.56
ATPAF1-203ENST00000460928 NUMBLQ9Y6R0 609 aa5.3□□□□□ -1.56
ATPAF1-203ENST00000460928 NID2Q14112 1375 aa5.29□□□□□ -1.56
ATPAF1-203ENST00000460928 BDP1A6H8Y1 2624 aa5.29□□□□□ -1.56
ATPAF1-203ENST00000460928 C11orf97A0A1B0GVM6 126 aaPredicted RBP5.29□□□□□ -1.56
ATPAF1-203ENST00000460928 SMCO2A6NFE2 343 aa5.29□□□□□ -1.56
ATPAF1-203ENST00000460928 SLC15A5A6NIM6 579 aa5.29□□□□□ -1.56
ATPAF1-203ENST00000460928 MEIS2O14770 477 aa5.29□□□□□ -1.56
ATPAF1-203ENST00000460928 CPLX1O14810 134 aa5.29□□□□□ -1.56
ATPAF1-203ENST00000460928 EDIL3O43854 480 aa5.29□□□□□ -1.56
ATPAF1-203ENST00000460928 SLC25A27O95847 323 aa5.29□□□□□ -1.56
ATPAF1-203ENST00000460928 PRLP01236 227 aa5.29□□□□□ -1.56
ATPAF1-203ENST00000460928 MYCLP12524 364 aaPredicted RBP5.29□□□□□ -1.56
ATPAF1-203ENST00000460928 SCG2P13521 617 aa5.29□□□□□ -1.56
ATPAF1-203ENST00000460928 CR2P20023 1033 aa5.29□□□□□ -1.56
ATPAF1-203ENST00000460928 PDCP20941 246 aa5.29□□□□□ -1.56
ATPAF1-203ENST00000460928 GNAQP50148 359 aa5.29□□□□□ -1.56
ATPAF1-203ENST00000460928 OAZ1P54368 228 aa5.29□□□□□ -1.56
ATPAF1-203ENST00000460928 LGALS4P56470 323 aa5.29□□□□□ -1.56
ATPAF1-203ENST00000460928 GSCP56915 257 aaPredicted RBP5.29□□□□□ -1.56
ATPAF1-203ENST00000460928 CCNA1P78396 465 aa5.29□□□□□ -1.56
ATPAF1-203ENST00000460928 SARNPP82979 210 aaKnown RBP5.29□□□□□ -1.56
ATPAF1-203ENST00000460928 CBX1P83916 185 aa5.29□□□□□ -1.56
ATPAF1-203ENST00000460928 CDK17Q00537 523 aa5.29□□□□□ -1.56
ATPAF1-203ENST00000460928 SLC6A3Q01959 620 aa5.29□□□□□ -1.56
ATPAF1-203ENST00000460928 ADCY2Q08462 1091 aa5.29□□□□□ -1.56
ATPAF1-203ENST00000460928 KLF10Q13118 480 aa5.29□□□□□ -1.56
ATPAF1-203ENST00000460928 NFYCQ13952 458 aa5.29□□□□□ -1.56
ATPAF1-203ENST00000460928 MORC3Q14149 939 aa5.29□□□□□ -1.56
ATPAF1-203ENST00000460928 MYBPC3Q14896 1274 aa5.29□□□□□ -1.56
ATPAF1-203ENST00000460928 PFKFB3Q16875 520 aaPredicted RBP5.29□□□□□ -1.56
ATPAF1-203ENST00000460928 RNF151Q2KHN1 245 aa5.29□□□□□ -1.56
ATPAF1-203ENST00000460928 UAP1L1Q3KQV9 507 aa5.29□□□□□ -1.56
ATPAF1-203ENST00000460928 C10orf62Q5T681 223 aaPredicted RBP5.29□□□□□ -1.56
ATPAF1-203ENST00000460928 AGBL4Q5VU57 503 aa5.29□□□□□ -1.56
ATPAF1-203ENST00000460928 PRAMEF9Q5VWM5 478 aa5.29□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms