RNA–Protein interactions for RNA: ENST00000460627.5

CHRD-208, Transcript of chordin, humanhuman

TSL 2

Gene CHRD, Length 4,719 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRD-208ENST00000460627 TBC1D13Q9NVG8 400 aa18.24■□□□□ 0.51
CHRD-208ENST00000460627 PCDHA2Q9Y5H9 948 aa18.24■□□□□ 0.51
CHRD-208ENST00000460627 XYLBO75191 536 aa18.24■□□□□ 0.51
CHRD-208ENST00000460627 CHRM3P20309 590 aa18.24■□□□□ 0.51
CHRD-208ENST00000460627 IFNA8P32881 189 aa18.24■□□□□ 0.51
CHRD-208ENST00000460627 TBC1D19Q8N5T2 526 aa18.24■□□□□ 0.51
CHRD-208ENST00000460627 PPP1R13LQ8WUF5 828 aa18.24■□□□□ 0.51
CHRD-208ENST00000460627 SUDS3Q9H7L9 328 aaPredicted RBP18.24■□□□□ 0.51
CHRD-208ENST00000460627 NMRK2Q9NPI5 230 aa18.24■□□□□ 0.51
CHRD-208ENST00000460627 TRHDEQ9UKU6 1024 aa18.24■□□□□ 0.51
CHRD-208ENST00000460627 PTCH2Q9Y6C5 1203 aa18.24■□□□□ 0.51
CHRD-208ENST00000460627 LRP6O75581 1613 aa18.23■□□□□ 0.51
CHRD-208ENST00000460627 RHOBTB1O94844 696 aa18.23■□□□□ 0.51
CHRD-208ENST00000460627 UGT3A1Q6NUS8 523 aa18.23■□□□□ 0.51
CHRD-208ENST00000460627 MTBPQ96DY7 904 aa18.23■□□□□ 0.51
CHRD-208ENST00000460627 GBP5Q96PP8 586 aa18.23■□□□□ 0.51
CHRD-208ENST00000460627 CA12O43570 354 aa18.23■□□□□ 0.51
CHRD-208ENST00000460627 PRMT2P55345 433 aa18.23■□□□□ 0.51
CHRD-208ENST00000460627 DCLRE1AQ6PJP8 1040 aa18.23■□□□□ 0.51
CHRD-208ENST00000460627 TSHZ1Q6ZSZ6 1077 aa18.23■□□□□ 0.51
CHRD-208ENST00000460627 PHF13Q86YI8 300 aaPredicted RBP18.23■□□□□ 0.51
CHRD-208ENST00000460627 KLF6Q99612 283 aaPredicted RBP18.23■□□□□ 0.51
CHRD-208ENST00000460627 UBE2OQ9C0C9 1292 aaKnown RBP18.23■□□□□ 0.51
CHRD-208ENST00000460627 SNED1Q8TER0 1413 aa18.23■□□□□ 0.51
CHRD-208ENST00000460627 TUBP50607 506 aa18.23■□□□□ 0.51
CHRD-208ENST00000460627 AMPD2Q01433 879 aa18.23■□□□□ 0.51
CHRD-208ENST00000460627 IRF2BP1Q8IU81 584 aa18.23■□□□□ 0.51
CHRD-208ENST00000460627 COLGALT1Q8NBJ5 622 aa18.23■□□□□ 0.51
CHRD-208ENST00000460627 XRN2Q9H0D6 950 aaKnown RBP eCLIP18.23■□□□□ 0.515e-6■■■□□ 18
CHRD-208ENST00000460627 HACD1B0YJ81 288 aa18.23■□□□□ 0.51
CHRD-208ENST00000460627 APOC4-APOC2K7ER74 178 aa18.23■□□□□ 0.51
CHRD-208ENST00000460627 ZNF862O60290 1169 aa18.23■□□□□ 0.51
CHRD-208ENST00000460627 HNRNPCL1O60812 293 aaKnown RBP18.23■□□□□ 0.51
CHRD-208ENST00000460627 APOC2P02655 101 aa18.23■□□□□ 0.51
CHRD-208ENST00000460627 CYP1A2P05177 515 aa18.23■□□□□ 0.51
CHRD-208ENST00000460627 SERPINF2P08697 491 aa18.23■□□□□ 0.51
CHRD-208ENST00000460627 SLAIN1Q8ND83 568 aa18.23■□□□□ 0.51
CHRD-208ENST00000460627 KCND1Q9NSA2 647 aa18.23■□□□□ 0.51
CHRD-208ENST00000460627 L1RE1Q9UN81 338 aa18.23■□□□□ 0.51
CHRD-208ENST00000460627 DUOX1Q9NRD9 1551 aa18.22■□□□□ 0.51
CHRD-208ENST00000460627 BTNL10A8MVZ5 291 aa18.22■□□□□ 0.51
CHRD-208ENST00000460627 ELNP15502 786 aa18.22■□□□□ 0.51
CHRD-208ENST00000460627 HNRNPH2P55795 449 aaKnown RBP18.22■□□□□ 0.51
CHRD-208ENST00000460627 ZNF662Q6ZS27 426 aa18.22■□□□□ 0.51
CHRD-208ENST00000460627 ANKS3Q6ZW76 656 aa18.22■□□□□ 0.51
CHRD-208ENST00000460627 PIGZQ86VD9 579 aa18.22■□□□□ 0.51
CHRD-208ENST00000460627 VAT1Q99536 393 aa18.22■□□□□ 0.51
CHRD-208ENST00000460627 ADGRE3Q9BY15 652 aa18.22■□□□□ 0.51
CHRD-208ENST00000460627 ETNK1Q9HBU6 452 aa18.22■□□□□ 0.51
CHRD-208ENST00000460627 SEPT4O43236 478 aa18.22■□□□□ 0.51
CHRD-208ENST00000460627 CRTAMO95727 393 aa18.22■□□□□ 0.51
CHRD-208ENST00000460627 USP17L7P0C7H9 530 aa18.22■□□□□ 0.51
CHRD-208ENST00000460627 RARAP10276 462 aa18.22■□□□□ 0.51
CHRD-208ENST00000460627 IL1RL1Q01638 556 aa18.22■□□□□ 0.51
CHRD-208ENST00000460627 FMO1Q01740 532 aa18.22■□□□□ 0.51
CHRD-208ENST00000460627 TOP6BLQ8N6T0 577 aa18.22■□□□□ 0.51
CHRD-208ENST00000460627 SPDL1Q96EA4 605 aa18.22■□□□□ 0.51
CHRD-208ENST00000460627 CDC42EP4Q9H3Q1 356 aaKnown RBP18.22■□□□□ 0.51
CHRD-208ENST00000460627 NT5MQ9NPB1 228 aa18.22■□□□□ 0.51
CHRD-208ENST00000460627 PCDHGB4Q9UN71 923 aa18.22■□□□□ 0.51
CHRD-208ENST00000460627 COL1A1P02452 1464 aaPredicted RBP18.22■□□□□ 0.51
CHRD-208ENST00000460627 CHUKO15111 745 aa18.22■□□□□ 0.51
CHRD-208ENST00000460627 TUSC3Q13454 348 aa18.22■□□□□ 0.51
CHRD-208ENST00000460627 AGR3Q8TD06 166 aa18.22■□□□□ 0.51
CHRD-208ENST00000460627 DEFB118Q96PH6 123 aa18.22■□□□□ 0.51
CHRD-208ENST00000460627 CCT8L2Q96SF2 557 aa18.22■□□□□ 0.51
CHRD-208ENST00000460627 FAM167BQ9BTA0 163 aa18.22■□□□□ 0.51
CHRD-208ENST00000460627 SCUBE2Q9NQ36 999 aa18.22■□□□□ 0.51
CHRD-208ENST00000460627 F8VP50 259 aa18.21■□□□□ 0.51
CHRD-208ENST00000460627 CBX4O00257 560 aa18.21■□□□□ 0.51
CHRD-208ENST00000460627 AMPD1P23109 780 aa18.21■□□□□ 0.51
CHRD-208ENST00000460627 CCL23P55773 120 aa18.21■□□□□ 0.51
CHRD-208ENST00000460627 MAMLD1Q13495 774 aa18.21■□□□□ 0.51
CHRD-208ENST00000460627 HTR3CQ8WXA8 447 aa18.21■□□□□ 0.51
CHRD-208ENST00000460627 SLC45A1Q9Y2W3 748 aa18.21■□□□□ 0.51
CHRD-208ENST00000460627 MAGEB16A2A368 324 aa18.21■□□□□ 0.51
CHRD-208ENST00000460627 YBX3P16989 372 aaKnown RBP eCLIP18.21■□□□□ 0.51
CHRD-208ENST00000460627 CNTFP26441 200 aa18.21■□□□□ 0.51
CHRD-208ENST00000460627 PSEN1P49768 467 aa18.21■□□□□ 0.51
CHRD-208ENST00000460627 ZNF143P52747 638 aaPredicted RBP18.21■□□□□ 0.51
CHRD-208ENST00000460627 NOMO3P69849 1222 aa18.21■□□□□ 0.51
CHRD-208ENST00000460627 LVRNQ6Q4G3 990 aa18.21■□□□□ 0.51
CHRD-208ENST00000460627 EFL1Q7Z2Z2 1120 aaKnown RBP18.21■□□□□ 0.51
CHRD-208ENST00000460627 NKX2-3Q8TAU0 364 aa18.21■□□□□ 0.51
CHRD-208ENST00000460627 HELQQ8TDG4 1101 aa18.21■□□□□ 0.51
CHRD-208ENST00000460627 MRPL17Q9NRX2 175 aaKnown RBP18.21■□□□□ 0.51
CHRD-208ENST00000460627 MARCH2Q9P0N8 246 aa18.21■□□□□ 0.51
CHRD-208ENST00000460627 SLC24A2Q9UI40 661 aa18.21■□□□□ 0.51
CHRD-208ENST00000460627 USP15Q9Y4E8 981 aaPredicted RBP18.21■□□□□ 0.51
CHRD-208ENST00000460627 OPLAHO14841 1288 aa18.21■□□□□ 0.51
CHRD-208ENST00000460627 SYF2O95926 243 aaKnown RBP18.21■□□□□ 0.51
CHRD-208ENST00000460627 SERPINB4P48594 390 aa18.21■□□□□ 0.51
CHRD-208ENST00000460627 TEDDM1Q5T9Z0 273 aa18.21■□□□□ 0.51
CHRD-208ENST00000460627 LNX1Q8TBB1 728 aaPredicted RBP18.21■□□□□ 0.51
CHRD-208ENST00000460627 NCLNQ969V3 563 aa18.21■□□□□ 0.51
CHRD-208ENST00000460627 ATXN3LQ9H3M9 355 aa18.21■□□□□ 0.51
CHRD-208ENST00000460627 RNF19AQ9NV58 838 aa18.21■□□□□ 0.51
CHRD-208ENST00000460627 IPPQ9Y573 584 aa18.21■□□□□ 0.51
CHRD-208ENST00000460627 DNALI1O14645 258 aaPredicted RBP18.21■□□□□ 0.51
CHRD-208ENST00000460627 GLRA3O75311 464 aa18.21■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms