RNA–Protein interactions for RNA: ENST00000460110.5

NUDCD3-203, Transcript of NudC domain containing 3, humanhuman

TSL 1 (best)

Gene NUDCD3, Length 3,641 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD3-203ENST00000460110 GPRIN1Q7Z2K8 1008 aa9.73□□□□□ -0.85
NUDCD3-203ENST00000460110 C4orf33Q8N1A6 199 aa9.73□□□□□ -0.85
NUDCD3-203ENST00000460110 BBOF1Q8ND07 529 aa9.73□□□□□ -0.85
NUDCD3-203ENST00000460110 RNF157Q96PX1 679 aa9.73□□□□□ -0.85
NUDCD3-203ENST00000460110 RASSF4Q9H2L5 321 aa9.73□□□□□ -0.85
NUDCD3-203ENST00000460110 PCDH18Q9HCL0 1135 aa9.73□□□□□ -0.85
NUDCD3-203ENST00000460110 INTS9Q9NV88 658 aaKnown RBP9.73□□□□□ -0.85
NUDCD3-203ENST00000460110 FAM53CQ9NYF3 392 aa9.73□□□□□ -0.85
NUDCD3-203ENST00000460110 CWC15Q9P013 229 aaKnown RBP9.73□□□□□ -0.85
NUDCD3-203ENST00000460110 TBKBP1A7MCY6 615 aa9.72□□□□□ -0.85
NUDCD3-203ENST00000460110 TUSC3Q13454 348 aa9.72□□□□□ -0.85
NUDCD3-203ENST00000460110 PTK6Q13882 451 aa9.72□□□□□ -0.85
NUDCD3-203ENST00000460110 DPYSL3Q14195 570 aa9.72□□□□□ -0.85
NUDCD3-203ENST00000460110 ANKRD20A8PQ5CZ79 823 aa9.72□□□□□ -0.85
NUDCD3-203ENST00000460110 PPP1R15BQ5SWA1 713 aa9.72□□□□□ -0.85
NUDCD3-203ENST00000460110 LRRC38Q5VT99 294 aa9.72□□□□□ -0.85
NUDCD3-203ENST00000460110 C3orf62Q6ZUJ4 267 aa9.72□□□□□ -0.85
NUDCD3-203ENST00000460110 PID1Q7Z2X4 250 aa9.72□□□□□ -0.85
NUDCD3-203ENST00000460110 GSTCDQ8NEC7 633 aa9.72□□□□□ -0.85
NUDCD3-203ENST00000460110 ART4Q93070 314 aa9.72□□□□□ -0.85
NUDCD3-203ENST00000460110 PPP1R10Q96QC0 940 aaKnown RBP9.72□□□□□ -0.85
NUDCD3-203ENST00000460110 APOL2Q9BQE5 337 aa9.72□□□□□ -0.85
NUDCD3-203ENST00000460110 ETNK2Q9NVF9 386 aa9.72□□□□□ -0.85
NUDCD3-203ENST00000460110 UBP1Q9NZI7 540 aa9.72□□□□□ -0.85
NUDCD3-203ENST00000460110 SFMBT1Q9UHJ3 866 aa9.72□□□□□ -0.85
NUDCD3-203ENST00000460110 ATP8B3O60423 1300 aa9.72□□□□□ -0.85
NUDCD3-203ENST00000460110 MSI1O43347 362 aaKnown RBP9.72□□□□□ -0.85
NUDCD3-203ENST00000460110 CREB1P16220 341 aa9.72□□□□□ -0.85
NUDCD3-203ENST00000460110 DNAJB2P25686 324 aa9.72□□□□□ -0.85
NUDCD3-203ENST00000460110 TPI1P60174 286 aa9.72□□□□□ -0.85
NUDCD3-203ENST00000460110 KLF1Q13351 362 aaPredicted RBP9.72□□□□□ -0.85
NUDCD3-203ENST00000460110 CTXN3Q4LDR2 81 aa9.72□□□□□ -0.85
NUDCD3-203ENST00000460110 KIAA0319Q5VV43 1072 aa9.72□□□□□ -0.85
NUDCD3-203ENST00000460110 ALKAL1Q6UXT8 129 aa9.72□□□□□ -0.85
NUDCD3-203ENST00000460110 BBS12Q6ZW61 710 aa9.72□□□□□ -0.85
NUDCD3-203ENST00000460110 TMEM110Q86TL2 294 aa9.72□□□□□ -0.85
NUDCD3-203ENST00000460110 ECHDC2Q86YB7 292 aa9.72□□□□□ -0.85
NUDCD3-203ENST00000460110 TOP6BLQ8N6T0 577 aa9.72□□□□□ -0.85
NUDCD3-203ENST00000460110 PCDH19Q8TAB3 1148 aa9.72□□□□□ -0.85
NUDCD3-203ENST00000460110 FERMT1Q9BQL6 677 aa9.72□□□□□ -0.85
NUDCD3-203ENST00000460110 SLC4A5Q9BY07 1137 aa9.72□□□□□ -0.85
NUDCD3-203ENST00000460110 WDCPQ9H6R7 721 aa9.72□□□□□ -0.85
NUDCD3-203ENST00000460110 ALG13Q9NP73 1137 aaKnown RBP9.72□□□□□ -0.85
NUDCD3-203ENST00000460110 NINJ2Q9NZG7 142 aa9.72□□□□□ -0.85
NUDCD3-203ENST00000460110 WHRNQ9P202 907 aa9.72□□□□□ -0.85
NUDCD3-203ENST00000460110 KLHL8Q9P2G9 620 aaPredicted RBP9.72□□□□□ -0.85
NUDCD3-203ENST00000460110 RASA4BC9J798 803 aa9.71□□□□□ -0.85
NUDCD3-203ENST00000460110 EEF2KO00418 725 aaKnown RBP9.71□□□□□ -0.85
NUDCD3-203ENST00000460110 RASA4O43374 803 aa9.71□□□□□ -0.85
NUDCD3-203ENST00000460110 USP12O75317 370 aa9.71□□□□□ -0.85
NUDCD3-203ENST00000460110 PPFIA2O75334 1257 aa9.71□□□□□ -0.85
NUDCD3-203ENST00000460110 GABBR2O75899 941 aa9.71□□□□□ -0.85
NUDCD3-203ENST00000460110 CYP2C18P33260 490 aa9.71□□□□□ -0.85
NUDCD3-203ENST00000460110 ARL4CP56559 192 aa9.71□□□□□ -0.85
NUDCD3-203ENST00000460110 PPP2R2AP63151 447 aa9.71□□□□□ -0.85
NUDCD3-203ENST00000460110 CRADDP78560 199 aa9.71□□□□□ -0.85
NUDCD3-203ENST00000460110 MRPS5P82675 430 aaKnown RBP9.71□□□□□ -0.85
NUDCD3-203ENST00000460110 TCEAL1Q15170 157 aa9.71□□□□□ -0.85
NUDCD3-203ENST00000460110 CYP1B1Q16678 543 aa9.71□□□□□ -0.85
NUDCD3-203ENST00000460110 NOMO2Q5JPE7 1267 aa9.71□□□□□ -0.85
NUDCD3-203ENST00000460110 DENND5BQ6ZUT9 1274 aa9.71□□□□□ -0.85
NUDCD3-203ENST00000460110 CRYBG2Q8N1P7 616 aa9.71□□□□□ -0.85
NUDCD3-203ENST00000460110 ALLCQ8N6M5 410 aa9.71□□□□□ -0.85
NUDCD3-203ENST00000460110 PLXNB2O15031 1838 aa9.71□□□□□ -0.85
NUDCD3-203ENST00000460110 TCRBV7S3A2A0A539 114 aa9.71□□□□□ -0.85
NUDCD3-203ENST00000460110 APOC4-APOC2K7ER74 178 aa9.71□□□□□ -0.85
NUDCD3-203ENST00000460110 DFFAO00273 331 aa9.71□□□□□ -0.85
NUDCD3-203ENST00000460110 EBAG9O00559 213 aa9.71□□□□□ -0.85
NUDCD3-203ENST00000460110 MDM4O15151 490 aa9.71□□□□□ -0.85
NUDCD3-203ENST00000460110 TTC4O95801 387 aa9.71□□□□□ -0.85
NUDCD3-203ENST00000460110 APOC2P02655 101 aa9.71□□□□□ -0.85
NUDCD3-203ENST00000460110 IVLP07476 585 aa9.71□□□□□ -0.85
NUDCD3-203ENST00000460110 BRAFP15056 766 aa9.71□□□□□ -0.85
NUDCD3-203ENST00000460110 APLP1P51693 650 aa9.71□□□□□ -0.85
NUDCD3-203ENST00000460110 EIF3BP55884 814 aaKnown RBP9.71□□□□□ -0.85
NUDCD3-203ENST00000460110 SPARCL1Q14515 664 aa9.71□□□□□ -0.85
NUDCD3-203ENST00000460110 C6orf118Q5T5N4 469 aa9.71□□□□□ -0.85
NUDCD3-203ENST00000460110 SLC24A5Q71RS6 500 aa9.71□□□□□ -0.85
NUDCD3-203ENST00000460110 DNAAF3Q8N9W5 541 aa9.71□□□□□ -0.85
NUDCD3-203ENST00000460110 BHMTQ93088 406 aa9.71□□□□□ -0.85
NUDCD3-203ENST00000460110 SMOQ99835 787 aa9.71□□□□□ -0.85
NUDCD3-203ENST00000460110 CHST12Q9NRB3 414 aa9.71□□□□□ -0.85
NUDCD3-203ENST00000460110 LAMA3Q16787 3333 aa9.71□□□□□ -0.86
NUDCD3-203ENST00000460110 DNALI1O14645 258 aaPredicted RBP9.71□□□□□ -0.86
NUDCD3-203ENST00000460110 LTFP02788 710 aa9.71□□□□□ -0.86
NUDCD3-203ENST00000460110 RPL17P18621 184 aaKnown RBP9.71□□□□□ -0.86
NUDCD3-203ENST00000460110 MATKP42679 507 aa9.71□□□□□ -0.86
NUDCD3-203ENST00000460110 COPS2P61201 443 aa9.71□□□□□ -0.86
NUDCD3-203ENST00000460110 IRX4P78413 519 aa9.71□□□□□ -0.86
NUDCD3-203ENST00000460110 ITKQ08881 620 aa9.71□□□□□ -0.86
NUDCD3-203ENST00000460110 POLNQ7Z5Q5 900 aa9.71□□□□□ -0.86
NUDCD3-203ENST00000460110 TP53INP2Q8IXH6 220 aa9.71□□□□□ -0.86
NUDCD3-203ENST00000460110 PLD5Q8N7P1 536 aa9.71□□□□□ -0.86
NUDCD3-203ENST00000460110 PPM1NQ8N819 430 aa9.71□□□□□ -0.86
NUDCD3-203ENST00000460110 GIPC2Q8TF65 315 aa9.71□□□□□ -0.86
NUDCD3-203ENST00000460110 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP9.71□□□□□ -0.863e-6■■■■■ 46.1
NUDCD3-203ENST00000460110 SMARCD1Q96GM5 515 aa9.71□□□□□ -0.86
NUDCD3-203ENST00000460110 HSFY1Q96LI6 401 aa9.71□□□□□ -0.86
NUDCD3-203ENST00000460110 POPDC2Q9HBU9 364 aa9.71□□□□□ -0.86
NUDCD3-203ENST00000460110 GDAP2Q9NXN4 497 aa9.71□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms