RNA–Protein interactions for RNA: ENST00000459756.5

COL7A1-203, Transcript of collagen type VII alpha 1 chain, humanhuman

TSL 5

Gene COL7A1, Length 818 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL7A1-203ENST00000459756 STRIP2Q9ULQ0 834 aa16.91■□□□□ 0.3
COL7A1-203ENST00000459756 ZNF510Q9Y2H8 683 aa16.91■□□□□ 0.3
COL7A1-203ENST00000459756 M0QYV0 167 aa16.9■□□□□ 0.3
COL7A1-203ENST00000459756 KRT5P13647 590 aa16.9■□□□□ 0.3
COL7A1-203ENST00000459756 BRD2P25440 801 aaKnown RBP16.9■□□□□ 0.3
COL7A1-203ENST00000459756 TNFRSF4P43489 277 aa16.9■□□□□ 0.3
COL7A1-203ENST00000459756 MTIF2P46199 727 aaKnown RBP16.9■□□□□ 0.3
COL7A1-203ENST00000459756 MFAP3P55082 362 aa16.9■□□□□ 0.3
COL7A1-203ENST00000459756 MRPS21P82921 87 aaKnown RBP16.9■□□□□ 0.3
COL7A1-203ENST00000459756 SIM2Q14190 667 aaPredicted RBP16.9■□□□□ 0.3
COL7A1-203ENST00000459756 C2orf27AQ580R0 203 aa16.9■□□□□ 0.3
COL7A1-203ENST00000459756 CT47A1Q5JQC4 288 aaPredicted RBP16.9■□□□□ 0.3
COL7A1-203ENST00000459756 Q6ZNB5 142 aa16.9■□□□□ 0.3
COL7A1-203ENST00000459756 BHLHA9Q7RTU4 235 aa16.9■□□□□ 0.3
COL7A1-203ENST00000459756 ETFBKMTQ8IXQ9 262 aa16.9■□□□□ 0.3
COL7A1-203ENST00000459756 CRACR2AQ9BSW2 395 aa16.9■□□□□ 0.3
COL7A1-203ENST00000459756 DCLK3Q9C098 648 aa16.9■□□□□ 0.3
COL7A1-203ENST00000459756 OLA1Q9NTK5 396 aaKnown RBP16.9■□□□□ 0.3
COL7A1-203ENST00000459756 MARK1Q9P0L2 795 aa16.9■□□□□ 0.3
COL7A1-203ENST00000459756 WDR35Q9P2L0 1181 aa16.9■□□□□ 0.3
COL7A1-203ENST00000459756 DEC1Q9P2X7 70 aa16.9■□□□□ 0.3
COL7A1-203ENST00000459756 RASAL2Q9UJF2 1139 aa16.9■□□□□ 0.3
COL7A1-203ENST00000459756 GPR179Q6PRD1 2367 aa16.9■□□□□ 0.3
COL7A1-203ENST00000459756 HRO43593 1189 aa16.89■□□□□ 0.29
COL7A1-203ENST00000459756 TULP3O75386 442 aa16.89■□□□□ 0.29
COL7A1-203ENST00000459756 APBB3O95704 486 aa16.89■□□□□ 0.29
COL7A1-203ENST00000459756 SEC13P55735 322 aa16.89■□□□□ 0.29
COL7A1-203ENST00000459756 KDSRQ06136 332 aa16.89■□□□□ 0.29
COL7A1-203ENST00000459756 DMC1Q14565 340 aa16.89■□□□□ 0.29
COL7A1-203ENST00000459756 EXOC3L4Q17RC7 722 aa16.89■□□□□ 0.29
COL7A1-203ENST00000459756 HSF5Q4G112 596 aaPredicted RBP16.89■□□□□ 0.29
COL7A1-203ENST00000459756 SMYD5Q6GMV2 418 aa16.89■□□□□ 0.29
COL7A1-203ENST00000459756 PMF1Q6P1K2 205 aa16.89■□□□□ 0.29
COL7A1-203ENST00000459756 NUDT18Q6ZVK8 323 aa16.89■□□□□ 0.29
COL7A1-203ENST00000459756 PHTF2Q8N3S3 785 aa16.89■□□□□ 0.29
COL7A1-203ENST00000459756 NAT16Q8N8M0 369 aa16.89■□□□□ 0.29
COL7A1-203ENST00000459756 HSFY1Q96LI6 401 aa16.89■□□□□ 0.29
COL7A1-203ENST00000459756 BBS2Q9BXC9 721 aa16.89■□□□□ 0.29
COL7A1-203ENST00000459756 APEX2Q9UBZ4 518 aa16.89■□□□□ 0.29
COL7A1-203ENST00000459756 YJEFN3A6XGL0 299 aa16.88■□□□□ 0.29
COL7A1-203ENST00000459756 E7ENQ6 273 aa16.88■□□□□ 0.29
COL7A1-203ENST00000459756 GOLGA6L22H0YM25 854 aa16.88■□□□□ 0.29
COL7A1-203ENST00000459756 MED7O43513 233 aa16.88■□□□□ 0.29
COL7A1-203ENST00000459756 CACNG3O60359 315 aa16.88■□□□□ 0.29
COL7A1-203ENST00000459756 KLKB1P03952 638 aa16.88■□□□□ 0.29
COL7A1-203ENST00000459756 LCP1P13796 627 aa16.88■□□□□ 0.29
COL7A1-203ENST00000459756 SLC9A1P19634 815 aa16.88■□□□□ 0.29
COL7A1-203ENST00000459756 HOXC13P31276 330 aa16.88■□□□□ 0.29
COL7A1-203ENST00000459756 PXNP49023 591 aaPredicted RBP16.88■□□□□ 0.29
COL7A1-203ENST00000459756 RGS7P49802 495 aa16.88■□□□□ 0.29
COL7A1-203ENST00000459756 DAOAP59103 153 aa16.88■□□□□ 0.29
COL7A1-203ENST00000459756 MESP2Q0VG99 397 aa16.88■□□□□ 0.29
COL7A1-203ENST00000459756 MEA1Q16626 185 aa16.88■□□□□ 0.29
COL7A1-203ENST00000459756 MAN2A1Q16706 1144 aa16.88■□□□□ 0.29
COL7A1-203ENST00000459756 BSPRYQ5W0U4 402 aa16.88■□□□□ 0.29
COL7A1-203ENST00000459756 LAIR1Q6GTX8 287 aa16.88■□□□□ 0.29
COL7A1-203ENST00000459756 PRR23BQ6ZRT6 265 aa16.88■□□□□ 0.29
COL7A1-203ENST00000459756 KCNV2Q8TDN2 545 aa16.88■□□□□ 0.29
COL7A1-203ENST00000459756 RNF139Q8WU17 664 aa16.88■□□□□ 0.29
COL7A1-203ENST00000459756 IRGQQ8WZA9 623 aa16.88■□□□□ 0.29
COL7A1-203ENST00000459756 NDRG1Q92597 394 aaKnown RBP16.88■□□□□ 0.29
COL7A1-203ENST00000459756 XPO6Q96QU8 1125 aaKnown RBP16.88■□□□□ 0.29
COL7A1-203ENST00000459756 HHIPQ96QV1 700 aa16.88■□□□□ 0.29
COL7A1-203ENST00000459756 ABCC13Q9NSE7 274 aa16.88■□□□□ 0.29
COL7A1-203ENST00000459756 POLR3BQ9NW08 1133 aaPredicted RBP16.88■□□□□ 0.29
COL7A1-203ENST00000459756 EBF1Q9UH73 591 aa16.88■□□□□ 0.29
COL7A1-203ENST00000459756 GMEB2Q9UKD1 530 aa16.88■□□□□ 0.29
COL7A1-203ENST00000459756 MMP17Q9ULZ9 603 aa16.88■□□□□ 0.29
COL7A1-203ENST00000459756 SLC12A8A0AV02 714 aa16.87■□□□□ 0.29
COL7A1-203ENST00000459756 TBC1D3BA6NDS4 549 aa16.87■□□□□ 0.29
COL7A1-203ENST00000459756 NEDD8-MDP1E9PL57 170 aa16.87■□□□□ 0.29
COL7A1-203ENST00000459756 FBXO21O94952 628 aa16.87■□□□□ 0.29
COL7A1-203ENST00000459756 CALCAP01258 141 aa16.87■□□□□ 0.29
COL7A1-203ENST00000459756 HMBSP08397 361 aa16.87■□□□□ 0.29
COL7A1-203ENST00000459756 PRKCSHP14314 528 aaPredicted RBP16.87■□□□□ 0.29
COL7A1-203ENST00000459756 TYRP14679 529 aa16.87■□□□□ 0.29
COL7A1-203ENST00000459756 PON1P27169 355 aa16.87■□□□□ 0.29
COL7A1-203ENST00000459756 CHKAP35790 457 aa16.87■□□□□ 0.29
COL7A1-203ENST00000459756 SRSF5Q13243 272 aaKnown RBP16.87■□□□□ 0.29
COL7A1-203ENST00000459756 TPGS1Q6ZTW0 290 aa16.87■□□□□ 0.29
COL7A1-203ENST00000459756 SFTPA1Q8IWL2 248 aa16.87■□□□□ 0.29
COL7A1-203ENST00000459756 DCLK2Q8N568 766 aa16.87■□□□□ 0.29
COL7A1-203ENST00000459756 GPR161Q8N6U8 529 aaKnown RBP16.87■□□□□ 0.29
COL7A1-203ENST00000459756 TERB1Q8NA31 727 aa16.87■□□□□ 0.29
COL7A1-203ENST00000459756 GAB3Q8WWW8 586 aa16.87■□□□□ 0.29
COL7A1-203ENST00000459756 PLD4Q96BZ4 506 aa16.87■□□□□ 0.29
COL7A1-203ENST00000459756 DNAJC17Q9NVM6 304 aaKnown RBP16.87■□□□□ 0.29
COL7A1-203ENST00000459756 HBS1LQ9Y450 684 aaKnown RBP16.87■□□□□ 0.29
COL7A1-203ENST00000459756 DMXL1Q9Y485 3027 aa16.87■□□□□ 0.29
COL7A1-203ENST00000459756 AXIN1O15169 862 aa16.86■□□□□ 0.29
COL7A1-203ENST00000459756 RPP40O75818 363 aaKnown RBP16.86■□□□□ 0.29
COL7A1-203ENST00000459756 GABBR2O75899 941 aa16.86■□□□□ 0.29
COL7A1-203ENST00000459756 LETM1O95202 739 aaPredicted RBP16.86■□□□□ 0.29
COL7A1-203ENST00000459756 CHRM1P11229 460 aaPredicted RBP16.86■□□□□ 0.29
COL7A1-203ENST00000459756 CORO1AP31146 461 aaKnown RBP16.86■□□□□ 0.29
COL7A1-203ENST00000459756 KIR2DL1P43626 348 aaPredicted RBP16.86■□□□□ 0.29
COL7A1-203ENST00000459756 DGKEP52429 567 aa16.86■□□□□ 0.29
COL7A1-203ENST00000459756 VWA3BQ502W6 1294 aa16.86■□□□□ 0.29
COL7A1-203ENST00000459756 GRAMD4Q6IC98 578 aa16.86■□□□□ 0.29
COL7A1-203ENST00000459756 GJB7Q6PEY0 223 aa16.86■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms