RNA–Protein interactions for RNA: ENST00000455883.2

CSMD3-204, Transcript of CUB and Sushi multiple domains 3, humanhuman

TSL 1 (best) BASIC

Gene CSMD3, Length 12,485 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD3-204ENST00000455883 LRRN2O75325 713 aa5.36□□□□□ -1.55
CSMD3-204ENST00000455883 NUDT17P0C025 328 aa5.36□□□□□ -1.55
CSMD3-204ENST00000455883 CDK18Q07002 472 aa5.36□□□□□ -1.55
CSMD3-204ENST00000455883 SPATA18Q8TC71 538 aa5.36□□□□□ -1.55
CSMD3-204ENST00000455883 RAD54LQ92698 747 aa5.36□□□□□ -1.55
CSMD3-204ENST00000455883 TOP1MTQ969P6 601 aa5.36□□□□□ -1.55
CSMD3-204ENST00000455883 BCL7BQ9BQE9 202 aa5.36□□□□□ -1.55
CSMD3-204ENST00000455883 SMYD3Q9H7B4 428 aa5.36□□□□□ -1.55
CSMD3-204ENST00000455883 GPN1Q9HCN4 374 aaPredicted RBP5.36□□□□□ -1.55
CSMD3-204ENST00000455883 TBC1D30Q9Y2I9 924 aa5.36□□□□□ -1.55
CSMD3-204ENST00000455883 UTYO14607 1347 aa5.36□□□□□ -1.55
CSMD3-204ENST00000455883 CRTAMO95727 393 aa5.36□□□□□ -1.55
CSMD3-204ENST00000455883 CYP2E1P05181 493 aaPredicted RBP5.36□□□□□ -1.55
CSMD3-204ENST00000455883 C1QBPQ07021 282 aaKnown RBP5.36□□□□□ -1.55
CSMD3-204ENST00000455883 ZNF235Q14590 738 aa5.36□□□□□ -1.55
CSMD3-204ENST00000455883 MTHFSDQ2M296 383 aaKnown RBP5.36□□□□□ -1.55
CSMD3-204ENST00000455883 SCYL2Q6P3W7 929 aa5.36□□□□□ -1.55
CSMD3-204ENST00000455883 STK32AQ8WU08 396 aa5.36□□□□□ -1.55
CSMD3-204ENST00000455883 ITPKCQ96DU7 683 aa5.36□□□□□ -1.55
CSMD3-204ENST00000455883 SLC40A1Q9NP59 571 aa5.36□□□□□ -1.55
CSMD3-204ENST00000455883 METTL5Q9NRN9 209 aaKnown RBP5.36□□□□□ -1.55
CSMD3-204ENST00000455883 PRMT7Q9NVM4 692 aaPredicted RBP5.36□□□□□ -1.55
CSMD3-204ENST00000455883 PRELID1Q9Y255 219 aa5.36□□□□□ -1.55
CSMD3-204ENST00000455883 DISP2A7MBM2 1401 aa5.36□□□□□ -1.55
CSMD3-204ENST00000455883 HEATR9A2RTY3 570 aa5.36□□□□□ -1.55
CSMD3-204ENST00000455883 EYA4O95677 639 aa5.36□□□□□ -1.55
CSMD3-204ENST00000455883 PET100P0DJ07 73 aa5.36□□□□□ -1.55
CSMD3-204ENST00000455883 GSPT1P15170 499 aaKnown RBP5.36□□□□□ -1.55
CSMD3-204ENST00000455883 SF3B3Q15393 1217 aaKnown RBP5.36□□□□□ -1.55
CSMD3-204ENST00000455883 PDCD4Q53EL6 469 aaKnown RBP5.36□□□□□ -1.55
CSMD3-204ENST00000455883 USP39Q53GS9 565 aaKnown RBP5.36□□□□□ -1.55
CSMD3-204ENST00000455883 DSTYKQ6XUX3 929 aa5.36□□□□□ -1.55
CSMD3-204ENST00000455883 CXXC5Q7LFL8 322 aaKnown RBP5.36□□□□□ -1.55
CSMD3-204ENST00000455883 ZNF420Q8TAQ5 688 aaPredicted RBP5.36□□□□□ -1.55
CSMD3-204ENST00000455883 MDM1Q8TC05 714 aa5.36□□□□□ -1.55
CSMD3-204ENST00000455883 RPRD1AQ96P16 312 aaPredicted RBP5.36□□□□□ -1.55
CSMD3-204ENST00000455883 ANKEF1Q9NU02 776 aa5.36□□□□□ -1.55
CSMD3-204ENST00000455883 UPB1Q9UBR1 384 aa5.36□□□□□ -1.55
CSMD3-204ENST00000455883 HAT1O14929 419 aa5.36□□□□□ -1.55
CSMD3-204ENST00000455883 DHFRP00374 187 aa5.36□□□□□ -1.55
CSMD3-204ENST00000455883 SRPRAP08240 638 aaKnown RBP5.36□□□□□ -1.55
CSMD3-204ENST00000455883 MLNP12872 115 aa5.36□□□□□ -1.55
CSMD3-204ENST00000455883 KCNA2P16389 499 aa5.36□□□□□ -1.55
CSMD3-204ENST00000455883 GPTP24298 496 aa5.36□□□□□ -1.55
CSMD3-204ENST00000455883 PTENP60484 403 aa5.36□□□□□ -1.55
CSMD3-204ENST00000455883 PPM1LQ5SGD2 360 aa5.36□□□□□ -1.55
CSMD3-204ENST00000455883 MFSD5Q6N075 450 aa5.36□□□□□ -1.55
CSMD3-204ENST00000455883 LINC00471Q8N535 108 aa5.36□□□□□ -1.55
CSMD3-204ENST00000455883 HEXDCQ8WVB3 486 aa5.36□□□□□ -1.55
CSMD3-204ENST00000455883 ARHGEF3Q9NR81 526 aa5.36□□□□□ -1.55
CSMD3-204ENST00000455883 TLR2O60603 784 aa5.36□□□□□ -1.55
CSMD3-204ENST00000455883 JAK2O60674 1132 aa5.36□□□□□ -1.55
CSMD3-204ENST00000455883 KLHL18O94889 574 aa5.36□□□□□ -1.55
CSMD3-204ENST00000455883 GCP02774 474 aa5.36□□□□□ -1.55
CSMD3-204ENST00000455883 HPCAL1P37235 193 aa5.36□□□□□ -1.55
CSMD3-204ENST00000455883 ACTR3P61158 418 aa5.36□□□□□ -1.55
CSMD3-204ENST00000455883 SLFN13Q68D06 897 aa5.36□□□□□ -1.55
CSMD3-204ENST00000455883 C10orf107Q8IVU9 208 aa5.36□□□□□ -1.55
CSMD3-204ENST00000455883 CENPIQ92674 756 aaPredicted RBP5.36□□□□□ -1.55
CSMD3-204ENST00000455883 LRRC40Q9H9A6 602 aa5.36□□□□□ -1.55
CSMD3-204ENST00000455883 HOXC10Q9NYD6 342 aa5.36□□□□□ -1.55
CSMD3-204ENST00000455883 PFDN2Q9UHV9 154 aa5.36□□□□□ -1.55
CSMD3-204ENST00000455883 MYO9AB2RTY4 2548 aa5.36□□□□□ -1.55
CSMD3-204ENST00000455883 MYLKQ15746 1914 aa5.36□□□□□ -1.55
CSMD3-204ENST00000455883 CYP2D7A0A087X1C5 515 aa5.36□□□□□ -1.55
CSMD3-204ENST00000455883 UBA6A0AVT1 1052 aaPredicted RBP5.36□□□□□ -1.55
CSMD3-204ENST00000455883 EFCAB10A6NFE3 127 aa5.36□□□□□ -1.55
CSMD3-204ENST00000455883 TULP3O75386 442 aa5.36□□□□□ -1.55
CSMD3-204ENST00000455883 RARBP10826 455 aa5.36□□□□□ -1.55
CSMD3-204ENST00000455883 HNRNPH1P31943 449 aaKnown RBP5.36□□□□□ -1.55
CSMD3-204ENST00000455883 MARSP56192 900 aaKnown RBP5.36□□□□□ -1.55
CSMD3-204ENST00000455883 SCN1BQ07699 218 aa5.36□□□□□ -1.55
CSMD3-204ENST00000455883 ZBTB49Q6ZSB9 765 aa5.36□□□□□ -1.55
CSMD3-204ENST00000455883 ALDH16A1Q8IZ83 802 aa5.36□□□□□ -1.55
CSMD3-204ENST00000455883 GPD1LQ8N335 351 aa5.36□□□□□ -1.55
CSMD3-204ENST00000455883 NSUN6Q8TEA1 469 aaKnown RBP5.36□□□□□ -1.55
CSMD3-204ENST00000455883 RNFT2Q96EX2 444 aa5.36□□□□□ -1.55
CSMD3-204ENST00000455883 KLHL25Q9H0H3 589 aa5.36□□□□□ -1.55
CSMD3-204ENST00000455883 GLS2Q9UI32 602 aa5.36□□□□□ -1.55
CSMD3-204ENST00000455883 TRHDEQ9UKU6 1024 aa5.36□□□□□ -1.55
CSMD3-204ENST00000455883 PCDHGB3Q9Y5G1 929 aa5.36□□□□□ -1.55
CSMD3-204ENST00000455883 FESP07332 822 aa5.35□□□□□ -1.55
CSMD3-204ENST00000455883 NR2C1P13056 603 aa5.35□□□□□ -1.55
CSMD3-204ENST00000455883 CXCR2P25025 360 aa5.35□□□□□ -1.55
CSMD3-204ENST00000455883 GRM4Q14833 912 aa5.35□□□□□ -1.55
CSMD3-204ENST00000455883 PACRGLQ8N7B6 248 aa5.35□□□□□ -1.55
CSMD3-204ENST00000455883 PHF23Q9BUL5 403 aaPredicted RBP5.35□□□□□ -1.55
CSMD3-204ENST00000455883 AP5M1Q9H0R1 490 aa5.35□□□□□ -1.55
CSMD3-204ENST00000455883 THUMPD1Q9NXG2 353 aaKnown RBP5.35□□□□□ -1.55
CSMD3-204ENST00000455883 ARHGEF38Q9NXL2 777 aa5.35□□□□□ -1.55
CSMD3-204ENST00000455883 TMED5Q9Y3A6 229 aa5.35□□□□□ -1.55
CSMD3-204ENST00000455883 MAGED1Q9Y5V3 778 aaPredicted RBP5.35□□□□□ -1.55
CSMD3-204ENST00000455883 PTPRUQ92729 1446 aa5.35□□□□□ -1.55
CSMD3-204ENST00000455883 USF3Q68DE3 2245 aa5.35□□□□□ -1.55
CSMD3-204ENST00000455883 SERPINE1P05121 402 aa5.35□□□□□ -1.55
CSMD3-204ENST00000455883 F8A1P23610 371 aa5.35□□□□□ -1.55
CSMD3-204ENST00000455883 GJA8P48165 433 aa5.35□□□□□ -1.55
CSMD3-204ENST00000455883 GCLCP48506 637 aaPredicted RBP5.35□□□□□ -1.55
CSMD3-204ENST00000455883 CHN2P52757 468 aa5.35□□□□□ -1.55
CSMD3-204ENST00000455883 TTLL4Q14679 1199 aa5.35□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms