RNA–Protein interactions for RNA: ENST00000453854.1

HMGB1P15-201, Transcript of high mobility group box 1 pseudogene 15, humanhuman

BASIC

Gene HMGB1P15, Length 435 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P15-201ENST00000453854 TRGV11A0A075B6L2 103 aa4.29□□□□□ -1.72
HMGB1P15-201ENST00000453854 GXYLT2A0PJZ3 443 aa4.29□□□□□ -1.72
HMGB1P15-201ENST00000453854 TISP43B9A030 160 aa4.29□□□□□ -1.72
HMGB1P15-201ENST00000453854 J3KRW8 73 aa4.29□□□□□ -1.72
HMGB1P15-201ENST00000453854 PPM1DO15297 605 aa4.29□□□□□ -1.72
HMGB1P15-201ENST00000453854 HOXC11O43248 304 aaPredicted RBP4.29□□□□□ -1.72
HMGB1P15-201ENST00000453854 FIBPO43427 364 aa4.29□□□□□ -1.72
HMGB1P15-201ENST00000453854 PROM1O43490 865 aa4.29□□□□□ -1.72
HMGB1P15-201ENST00000453854 ERBB2P04626 1255 aa4.29□□□□□ -1.72
HMGB1P15-201ENST00000453854 DDX6P26196 483 aaKnown RBP eCLIP4.29□□□□□ -1.72
HMGB1P15-201ENST00000453854 RXRGP48443 463 aa4.29□□□□□ -1.72
HMGB1P15-201ENST00000453854 PAPOLAP51003 745 aaKnown RBP4.29□□□□□ -1.72
HMGB1P15-201ENST00000453854 SEC24CP53992 1094 aa4.29□□□□□ -1.72
HMGB1P15-201ENST00000453854 SLC25A3Q00325 362 aa4.29□□□□□ -1.72
HMGB1P15-201ENST00000453854 PRKD1Q15139 912 aaPredicted RBP4.29□□□□□ -1.72
HMGB1P15-201ENST00000453854 LY6KQ17RY6 165 aa4.29□□□□□ -1.72
HMGB1P15-201ENST00000453854 DEPDC1Q5TB30 811 aa4.29□□□□□ -1.72
HMGB1P15-201ENST00000453854 SLC9A4Q6AI14 798 aa4.29□□□□□ -1.72
HMGB1P15-201ENST00000453854 RINT1Q6NUQ1 792 aa4.29□□□□□ -1.72
HMGB1P15-201ENST00000453854 MSANTD2Q6P1R3 559 aa4.29□□□□□ -1.72
HMGB1P15-201ENST00000453854 RSRC2Q7L4I2 434 aaKnown RBP4.29□□□□□ -1.72
HMGB1P15-201ENST00000453854 MAATS1Q7Z4T9 603 aa4.29□□□□□ -1.72
HMGB1P15-201ENST00000453854 SPRED1Q7Z699 444 aa4.29□□□□□ -1.72
HMGB1P15-201ENST00000453854 TRABD2AQ86V40 505 aa4.29□□□□□ -1.72
HMGB1P15-201ENST00000453854 C2CD5Q86YS7 1000 aa4.29□□□□□ -1.72
HMGB1P15-201ENST00000453854 LNX2Q8N448 690 aa4.29□□□□□ -1.72
HMGB1P15-201ENST00000453854 METTL25Q8N6Q8 603 aa4.29□□□□□ -1.72
HMGB1P15-201ENST00000453854 ATRIPQ8WXE1 791 aa4.29□□□□□ -1.72
HMGB1P15-201ENST00000453854 SOCS4Q8WXH5 440 aa4.29□□□□□ -1.72
HMGB1P15-201ENST00000453854 TRAPPC9Q96Q05 1148 aa4.29□□□□□ -1.72
HMGB1P15-201ENST00000453854 HAPLN3Q96S86 360 aa4.29□□□□□ -1.72
HMGB1P15-201ENST00000453854 SERINC2Q96SA4 455 aa4.29□□□□□ -1.72
HMGB1P15-201ENST00000453854 ACTRT3Q9BYD9 372 aa4.29□□□□□ -1.72
HMGB1P15-201ENST00000453854 KLC2Q9H0B6 622 aa4.29□□□□□ -1.72
HMGB1P15-201ENST00000453854 UNC45AQ9H3U1 944 aa4.29□□□□□ -1.72
HMGB1P15-201ENST00000453854 TAF1DQ9H5J8 278 aaPredicted RBP4.29□□□□□ -1.72
HMGB1P15-201ENST00000453854 SEPSECSQ9HD40 501 aaKnown RBP4.29□□□□□ -1.72
HMGB1P15-201ENST00000453854 NFU1Q9UMS0 254 aa4.29□□□□□ -1.72
HMGB1P15-201ENST00000453854 C19orf53Q9UNZ5 99 aaPredicted RBP4.29□□□□□ -1.72
HMGB1P15-201ENST00000453854 CNTN6Q9UQ52 1028 aa4.29□□□□□ -1.72
HMGB1P15-201ENST00000453854 DRG1Q9Y295 367 aaKnown RBP4.29□□□□□ -1.72
HMGB1P15-201ENST00000453854 TCAF1Q9Y4C2 921 aa4.29□□□□□ -1.72
HMGB1P15-201ENST00000453854 EFCAB8A8MWE9 144 aa4.28□□□□□ -1.72
HMGB1P15-201ENST00000453854 K7ENM7 598 aa4.28□□□□□ -1.72
HMGB1P15-201ENST00000453854 LPXNO60711 386 aa4.28□□□□□ -1.72
HMGB1P15-201ENST00000453854 RPP40O75818 363 aaKnown RBP4.28□□□□□ -1.72
HMGB1P15-201ENST00000453854 SPDEFO95238 335 aa4.28□□□□□ -1.72
HMGB1P15-201ENST00000453854 NDUFA10O95299 355 aa4.28□□□□□ -1.72
HMGB1P15-201ENST00000453854 LMNAP02545 664 aaKnown RBP4.28□□□□□ -1.72
HMGB1P15-201ENST00000453854 POLBP06746 335 aa4.28□□□□□ -1.72
HMGB1P15-201ENST00000453854 JUPP14923 745 aa4.28□□□□□ -1.72
HMGB1P15-201ENST00000453854 CD19P15391 556 aa4.28□□□□□ -1.72
HMGB1P15-201ENST00000453854 PPP3CBP16298 524 aa4.28□□□□□ -1.72
HMGB1P15-201ENST00000453854 AARSP49588 968 aaKnown RBP eCLIP4.28□□□□□ -1.72
HMGB1P15-201ENST00000453854 CCR5P51681 352 aa4.28□□□□□ -1.72
HMGB1P15-201ENST00000453854 NXPH1P58417 271 aa4.28□□□□□ -1.72
HMGB1P15-201ENST00000453854 ITIH3Q06033 890 aa4.28□□□□□ -1.72
HMGB1P15-201ENST00000453854 CSHL1Q14406 222 aa4.28□□□□□ -1.72
HMGB1P15-201ENST00000453854 SMAD1Q15797 465 aaKnown RBP4.28□□□□□ -1.72
HMGB1P15-201ENST00000453854 NRN1LQ496H8 165 aa4.28□□□□□ -1.72
HMGB1P15-201ENST00000453854 FAM90A2PQ658T7 463 aa4.28□□□□□ -1.72
HMGB1P15-201ENST00000453854 RETSATQ6NUM9 610 aa4.28□□□□□ -1.72
HMGB1P15-201ENST00000453854 CLEC9AQ6UXN8 241 aa4.28□□□□□ -1.72
HMGB1P15-201ENST00000453854 PIK3AP1Q6ZUJ8 805 aa4.28□□□□□ -1.72
HMGB1P15-201ENST00000453854 BRINP3Q76B58 766 aa4.28□□□□□ -1.72
HMGB1P15-201ENST00000453854 IL17DQ8TAD2 202 aa4.28□□□□□ -1.72
HMGB1P15-201ENST00000453854 LPIN2Q92539 896 aa4.28□□□□□ -1.72
HMGB1P15-201ENST00000453854 MAELQ96JY0 434 aaKnown RBP4.28□□□□□ -1.72
HMGB1P15-201ENST00000453854 TPSD1Q9BZJ3 242 aa4.28□□□□□ -1.72
HMGB1P15-201ENST00000453854 DEF6Q9H4E7 631 aa4.28□□□□□ -1.72
HMGB1P15-201ENST00000453854 TMEM160Q9NX00 188 aa4.28□□□□□ -1.72
HMGB1P15-201ENST00000453854 STEAP1Q9UHE8 339 aa4.28□□□□□ -1.72
HMGB1P15-201ENST00000453854 SLC45A1Q9Y2W3 748 aa4.28□□□□□ -1.72
HMGB1P15-201ENST00000453854 A1L4Q6 167 aa4.27□□□□□ -1.73
HMGB1P15-201ENST00000453854 WDR27A2RRH5 827 aa4.27□□□□□ -1.73
HMGB1P15-201ENST00000453854 A8MVJ9 347 aa4.27□□□□□ -1.73
HMGB1P15-201ENST00000453854 SLC16A3O15427 465 aaKnown RBP4.27□□□□□ -1.73
HMGB1P15-201ENST00000453854 CTIFO43310 598 aaKnown RBP4.27□□□□□ -1.73
HMGB1P15-201ENST00000453854 FAM20BO75063 409 aa4.27□□□□□ -1.73
HMGB1P15-201ENST00000453854 RHOBTB3O94955 611 aa4.27□□□□□ -1.73
HMGB1P15-201ENST00000453854 WDR47O94967 919 aa4.27□□□□□ -1.73
HMGB1P15-201ENST00000453854 CER1O95813 267 aa4.27□□□□□ -1.73
HMGB1P15-201ENST00000453854 HSP90AB1P08238 724 aaKnown RBP4.27□□□□□ -1.73
HMGB1P15-201ENST00000453854 LAG3P18627 525 aa4.27□□□□□ -1.73
HMGB1P15-201ENST00000453854 CNTFP26441 200 aa4.27□□□□□ -1.73
HMGB1P15-201ENST00000453854 MCM2P49736 904 aa4.27□□□□□ -1.73
HMGB1P15-201ENST00000453854 VAMP2P63027 116 aa4.27□□□□□ -1.73
HMGB1P15-201ENST00000453854 KCNJ12Q14500 433 aa4.27□□□□□ -1.73
HMGB1P15-201ENST00000453854 BTBD16Q32M84 506 aa4.27□□□□□ -1.73
HMGB1P15-201ENST00000453854 AASDHQ4L235 1098 aaPredicted RBP4.27□□□□□ -1.73
HMGB1P15-201ENST00000453854 MAP3K21Q5TCX8 1036 aa4.27□□□□□ -1.73
HMGB1P15-201ENST00000453854 ANKRD45Q5TZF3 282 aa4.27□□□□□ -1.73
HMGB1P15-201ENST00000453854 ZNF585AQ6P3V2 769 aa4.27□□□□□ -1.73
HMGB1P15-201ENST00000453854 PDXDC1Q6P996 788 aa4.27□□□□□ -1.73
HMGB1P15-201ENST00000453854 VWA1Q6PCB0 445 aa4.27□□□□□ -1.73
HMGB1P15-201ENST00000453854 BBS12Q6ZW61 710 aa4.27□□□□□ -1.73
HMGB1P15-201ENST00000453854 RHOUQ7L0Q8 258 aa4.27□□□□□ -1.73
HMGB1P15-201ENST00000453854 MAVSQ7Z434 540 aa4.27□□□□□ -1.73
HMGB1P15-201ENST00000453854 GPR149Q86SP6 731 aa4.27□□□□□ -1.73
HMGB1P15-201ENST00000453854 TTC30AQ86WT1 665 aa4.27□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 60.5 ms